Started by user <a href='/user/arnoldg' class='jenkins-table__link model-link model-link--float'>arnoldg</a>
Building on master in workspace /var/lib/jenkins/workspace/LAMMPS
Updating <a href='https://github.com/kc9qey/SWTools-BWCI/trunk/lammps@HEAD'>https://github.com/kc9qey/SWTools-BWCI/trunk/lammps@HEAD</a> at revision HEAD
At revision 24

No changes for <a href='https://github.com/kc9qey/SWTools-BWCI/trunk/lammps'>https://github.com/kc9qey/SWTools-BWCI/trunk/lammps</a> since the previous build
[LAMMPS] $ /bin/sh -xe /tmp/jenkins6398237846677172594.sh
+ /usr/local/bin/jenkins_sync /var/lib/jenkins/workspace/LAMMPS/lammps
NCSA JYC System 
Access status: User Access UnRestricted.

Access by OTP or Two Factor Certificate Authority only.
Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access.
gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access.

Restricted access during weekly scheduled maintenance on Wednesdays 10AM - 6PM

executing script:
PATH="/sw/tools/bin:/sw/tools/bin:$PATH"
SW_CONFIG="/scratch/system/bwjenkins/sw_config"
PYTHONPATH="/sw/tools/bin:/sw/tools/bin:$PYTHONPATH"
SW_ROOT="/scratch/system/bwjenkins/tests"

echo $PATH $SW_CONFIG $PYTHONPATH &gt; /dev/null
export SW_CONFIG=$SW_CONFIG
env
cd /tmp
git clone <a href='https://github.com/kc9qey/SWTools-BWCI'>https://github.com/kc9qey/SWTools-BWCI</a>
cd SWTools-BWCI
cp -R lammps $SW_ROOT
cd /tmp
rm -rf SWTools-BWCI
cd $SW_ROOT
cd lammps/15May15/cle5.2_gnu4.9.3
swbuildwait
PE_SMA_DEFAULT_PKGCONFIG_VARIABLES=PE_SMA_COMPFLAG_@prgenv@
PE_LIBSCI_VOLATILE_PRGENV=CRAY GNU INTEL PGI
CRAY_BINUTILS_BIN=/opt/cray/cce/8.7.7/binutils/x86_64/bin
KSH_AUTOLOAD=1
MODULE_VERSION_STACK=3.2.10.5
LESSKEY=/etc/lesskey.bin
PE_MPICH_GENCOMPILERS_PGI=15.3
PE_CXX_PKGCONFIG_LIBS=mpichcxx
PE_PETSC_DEFAULT_GENCOMPS_CRAY_skylake=86
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.6
PE_PAPI_DEFAULT_ACCEL_FAMILY_LIBS_nvidia=,-lcupti,-lcudart,-lcuda
NNTPSERVER=news
INFODIR=/usr/local/info:/usr/share/info:/usr/info
MANPATH=/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/EasyBuild/software/wget/1.19.4/share/man:/sw/EasyBuild/software/cURL/7.59.0/share/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-6.0/man:/opt/cray/mpt/7.7.4/gni/man/mpich:/opt/torque/6.1.2/share/man:/opt/moab/9.1.2.h2/share/man/:/opt/cray/atp/2.1.0/man:/opt/cray/pmi/5.0.11/man:/opt/cray/libsci/18.12.1/man:/opt/cray/man/csmlversion:/opt/cray/craype/2.5.16/man:/opt/cray/cce/8.7.7/man:/opt/cray/llm/default/man:/opt/cray/lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.44.1-1.0502.21728.75.3/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/modules/3.2.10.5/share/man:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/opt/cray/man:/u/system/bwjenkins/man
MODIMP_KEEP_MODULE_LIST_IN_ENV=no
XALT_ETC_DIR=/opt/xalt/0.7.6/sles11.3/etc
EBROOTGIT=/sw/EasyBuild/software/git/2.17.0
PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64=1710
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_mic_knl=16.0
PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_@accelerator@
PE_FFTW_DEFAULT_TARGET_mic_knl=mic_knl
GCC_X86_64=/opt/gcc/6.1.0/snos
GCC_AARCH64=/opt/gcc-cross-aarch64/6.1.0/aarch64
CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/include
HOSTNAME=jyc1
PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/trilinos/12.12.1.1/@PRGENV@/@PE_TRILINOS_DEFAULT_GENCOMPS@/@PE_TRILINOS_DEFAULT_TARGET@/lib/pkgconfig
PE_SMA_DEFAULT_COMPFLAG_GNU=-fcray-pointer
PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.8.1.4/@PRGENV@/@PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf/4.4.1.1/@PRGENV@/@PE_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_ACML_DEFAULT_DIR_GNU=gfortran64
ASSEMBLER_AARCH64=/opt/cray/cce/8.7.7/binutils/cross/x86_64-aarch64/aarch64-linux-gnu/bin/as
RCLOCAL_BASEOPTS=true
LIBRARYMODULES=/opt/modules/3.2.10.5/init/.librarymodules:acml:alps:cray-dwarf:cray-fftw:cray-ga:cray-hdf5:cray-hdf5-parallel:cray-libsci:cray-libsci_acc:cray-mpich:cray-mpich2:cray-mpich-abi:cray-netcdf:cray-netcdf-hdf5parallel:cray-parallel-netcdf:cray-petsc:cray-petsc-complex:cray-shmem:cray-tpsl:cray-trilinos:cudatoolkit:fftw:ga:hdf5:hdf5-parallel:iobuf:libfast:netcdf:netcdf-hdf5parallel:ntk:onesided:papi:petsc:petsc-complex:pmi:tpsl:trilinos:xt-libsci:xt-mpich2:xt-mpt:xt-papi:/etc/opt/cray/modules/site_librarymodules
CRAY_SITE_LIST_DIR=/etc/opt/cray/modules
XKEYSYMDB=/usr/share/X11/XKeysymDB
EBDEVELOPENSSL=/sw/EasyBuild/software/OpenSSL/1.0.2m/easybuild/OpenSSL-1.0.2m-easybuild-devel
PE_SMA_DEFAULT_COMPFLAG=
PE_MPICH_ALTERNATE_LIBS_dpm=_dpm
PE_HDF5_DEFAULT_GENCOMPILERS_GNU=5.1 4.9
PE_ENV=CRAY
PE_ACML_DEFAULT_DIR_DEFAULT64=_int64
CRAY_FTN_VERSION=8.7.7
CRAY_BINUTILS_ROOT=/opt/cray/cce/8.7.7/binutils/x86_64/x86_64-pc-linux-gnu/../
EBDEVELGNUPLOT=/sw/EasyBuild/software/gnuplot/5.0.5/easybuild/gnuplot-5.0.5-easybuild-devel
PKGCONFIG_ENABLED=1
PE_ACML_DEFAULT_TARGET_interlagos=_fma4
ASSEMBLER_X86_64=/opt/cray/cce/8.7.7/binutils/x86_64/x86_64-pc-linux-gnu/bin/as
HOST=jyc1
SHELL=/bin/bash
XTOS_VERSION=5.2.82
PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_skylake=8.2
PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge=86
LINKER_AARCH64=/opt/cray/cce/8.7.7/binutils/cross/x86_64-aarch64/aarch64-linux-gnu/bin/ld
PROFILEREAD=true
HISTSIZE=1000
GLOBUS_PATH=/usr/local/globus-6.0
GLOBUS_LOCATION=/usr/local/globus-6.0
PE_MPICH_DIR_PGI_DEFAULT64=64
PE_TRILINOS_DEFAULT_VOLATILE_PRGENV=GNU
PE_TPSL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI
PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge=82
PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos=1710
PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell=160
PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell=82 53
PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU
PE_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU
FORTRAN_SYSTEM_MODULE_NAMES=ftn_lib_definitions
CRAYPE_DIR=/opt/cray/craype/2.5.16
CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0502.64982.7.26.gem/lib64
CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64
SSH_CLIENT=141.142.192.225 58516 22
LIBRARY_PATH=/sw/EasyBuild/software/cURL/7.59.0/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib
XALT_DIR=/opt/xalt/0.7.6/sles11.3
ALT_LINKER=/opt/xalt/0.7.6/sles11.3/bin/ld
CRAY_MPICH2_DIR=/opt/cray/mpt/7.7.4/gni/mpich-cray/8.6
PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos=86
PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64=17.10
PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf-hdf5parallel/4.4.1.1/@PRGENV@/@PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5-parallel/1.10.0.1/@PRGENV@/@PE_HDF5_PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_HDF5_DEFAULT_VOLATILE_PRGENV=GNU
PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.6.5/@PE_FFTW_DEFAULT_TARGET@/lib/pkgconfig
PE_ACML_DEFAULT_DIR_CRAY=gfortran64
PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64=81 71 51
PE_GA_DEFAULT_VOLATILE_PRGENV=GNU
MODIMP_ENABLE_DYNAMIC_PROMPT=no
PE_MPICH_GENCOMPS_GNU=82 71 51
PE_PKGCONFIG_PRODUCTS=PE_MPICH:PE_LIBSCI
PE_MPICH_DEFAULT_GENCOMPILERS_GNU=8.2 7.1 5.1
PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI
PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64=83
FPATH=:/opt/modules/3.2.10.5/init/sh_funcs/no_redirect:/opt/modules/3.2.10.5/init/sh_funcs/no_redirect
MORE=-sl
PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/18.06.1/@PRGENV@64/@PE_TPSL_64_DEFAULT_GENCOMPS@/@PE_TPSL_64_DEFAULT_TARGET@/lib/pkgconfig
PE_PETSC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI:PE_HDF5_PARALLEL:PE_TPSL
PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35=,-lcupti,-lcudart,-lcuda
QTDIR=/usr/lib/qt3
PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.8.1.4/CRAY/8.6/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1.1/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1.1/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0.1/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0.1/CRAY/8.3/lib/pkgconfig:/opt/cray/ga/5.3.0.9/CRAY/8.6/lib/pkgconfig
PE_FORTRAN_PKGCONFIG_LIBS=mpichf90
PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64=86
PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos=17.10
PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp=_mp
ALLINEA_QUEUE_DLL=/opt/cray/mpt/7.7.4/gni/mpich-cray/8.6/lib/libtvmpich.so.3.0.1
PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.7.4/gni/sma@PE_SMA_DEFAULT_DIR_DEFAULT64@/lib64/pkgconfig
CRAY_PRGENVCRAY=loaded
CRAY_BINUTILS_VERSION=/opt/cray/cce/8.7.7
CRAY_BINUTILS_ROOT_AARCH64=/opt/cray/cce/8.7.7/binutils/cross/x86_64-aarch64/aarch64-linux-gnu/../
EBROOTWGET=/sw/EasyBuild/software/wget/1.19.4
CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.7.4/gni
PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV=CRAY GNU
PE_ACML_DEFAULT_DIR_INTEL=ifort64
PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1 4.9
PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1 4.9
PE_ACML_DEFAULT_TARGET_x86_64=
JRE_HOME=/opt/java/jdk1.8.0_51/jre
USER=bwjenkins
PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64=8.2
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos=16.0
PE_LIBSCI_DEFAULT_VOLATILE_PRGENV=CRAY GNU INTEL PGI
PE_FFTW_DEFAULT_TARGET_interlagos=interlagos
LS_COLORS=
LD_LIBRARY_PATH=/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib:/usr/local/globus-6.0/lib
GPT_LOCATION=/usr/local/globus-6.0
PE_MPICH_FIXED_PRGENV=INTEL
PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge=8.2
PE_PKGCONFIG_LIBS=darshan-runtime:mpich:AtpSigHandler:cray-rca:libsci_mpi:libsci
PE_PETSC_DEFAULT_VOLATILE_PRGENV=CRAY CRAY64 GNU GNU64 INTEL INTEL64 PGI PGI64
PE_LIBSCI_PKGCONFIG_VARIABLES=PE_LIBSCI_OMP_REQUIRES_@openmp@:PE_SCI_EXT_LIBPATH:PE_SCI_EXT_LIBNAME
CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64 -lrca 
VAR_ACE=/var/ace
PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell=82
PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge=160
PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos=160
PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge=82 53
PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos=82 53
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_skylake=16.0
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.6
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.6
FTN_X86_64=/opt/cray/cce/8.7.7/cce/x86_64
XNLSPATH=/usr/share/X11/nls
EBVERSIONCURL=7.59.0
MPICH_DIR=/opt/cray/mpt/7.7.4/gni/mpich-cray/8.6
PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos=8.2
PE_PETSC_DEFAULT_GENCOMPS_INTEL_mic_knl=160
PE_PETSC_DEFAULT_GENCOMPS_GNU_mic_knl=53
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell=8.6
PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES=PE_PAPI_ACCEL_LIBS_@accelerator@ PE_PAPI_ACCEL_FAMILY_LIBS_@accelerator_family@
PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64=86
MPICH_ABORT_ON_ERROR=1
CRAY_CXX_IPA_LIBS=/opt/cray/cce/8.7.7/cce/x86_64/lib/libcray-c++-rts.a
ENV=/etc/bash.bashrc
CPATH=/sw/EasyBuild/software/cURL/7.59.0/include:/sw/EasyBuild/software/OpenSSL/1.0.2m/include
PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge=16.0
PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5_PARALLEL:PE_MPICH
PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH
PE_FFTW_DEFAULT_TARGET_sandybridge=sandybridge
PE_FFTW_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH
ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/2.1.0/libApp/ 
HOSTTYPE=x86_64
TMOUT=86400
EBDEVELGIT=/sw/EasyBuild/software/git/2.17.0/easybuild/git-2.17.0-easybuild-devel
RCLOCAL_PRGENV=true
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_mic_knl=5.3
PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos=82
PE_LIBSCI_GENCOMPS_INTEL_x86_64=160
PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64=16.0
PE_PRODUCT_LIST=CRAYPE_INTERLAGOS:CRAY_RCA:CRAY_PMI:CRAY_LIBSCI:CRAYPE:CRAY:CRAY_LLM:CRAY_XPMEM:CRAY_DMAPP:CRAY_UGNI:CRAY_UDREG:CRAY_ALPS
FROM_HEADER=
LIBPATH=/usr/local/globus-6.0/lib
CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.7.4
PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_skylake=82
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64=8.2 5.3
PE_MPICH_DEFAULT_GENCOMPS_PGI=153
PAGER=less
JAVA_PATH=/opt/java/jdk1.8.0_51
PE_MPICH_MODULE_NAME=cray-mpich
PE_MPICH_GENCOMPILERS_CRAY=8.6
PE_PETSC_DEFAULT_GENCOMPS_INTEL_skylake=160
PE_PETSC_DEFAULT_GENCOMPS_GNU_skylake=82 73
PE_LIBSCI_GENCOMPILERS_GNU_x86_64=8.1 7.1 5.1
CSHEDIT=emacs
PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI
PE_MPICH_TARGET_VAR_nvidia20=-lcudart
PE_MPICH_DEFAULT_VOLATILE_PRGENV=CRAY GNU PGI
PE_LIBSCI_GENCOMPS_CRAY_x86_64=86
PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.6
XDG_CONFIG_DIRS=/etc/xdg
MODIMP_AVAILABLE_MODULES=
EBDEVELWGET=/sw/EasyBuild/software/wget/1.19.4/easybuild/wget-1.19.4-easybuild-devel
PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64=82
PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU=82 51
PE_NETCDF_DEFAULT_GENCOMPS_GNU=51 49
PE_LIBSCI_PKGCONFIG_LIBS=libsci_mpi:libsci
PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci_acc/16.03.1/@PRGENV@/@PE_LIBSCI_ACC_DEFAULT_GENCOMPS@/@PE_LIBSCI_ACC_DEFAULT_TARGET@/lib/pkgconfig
PE_ACML_DEFAULT_DIR_PGI=pgi64
NLSPATH=/opt/cray/cce/8.7.7/cce/x86_64/share/nls/En/%N.cat
CRAY_LIBSCI_DIR=/opt/cray/libsci/18.12.1
CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/18.12.1
CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/include -I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include 
USERMODULES=/opt/modules/3.2.10.5/init/.usermodules:acml:alps:apprentice:apprentice2:atp:blcr:cce:chapel:cray-ccdb:cray-fftw:cray-ga:cray-hdf5:cray-hdf5-parallel:cray-lgdb:cray-libsci:cray-libsci_acc:cray-mpich:cray-mpich2:cray-mpich-compat:cray-netcdf:cray-netcdf-hdf5parallel:cray-parallel-netcdf:craypat:craype:cray-petsc:cray-petsc-complex:craypkg-gen:cray-shmem:cray-snplauncher:cray-tpsl:cray-trilinos:cudatoolkit:ddt:fftw:ga:hdf5:hdf5-parallel:intel:iobuf:java:lgdb:libfast:libsci_acc:mpich1:netcdf:netcdf-hdf5parallel:netcdf-nofsync:netcdf-nofsync-hdf5parallel:ntk:onesided:papi:parallel-netcdf:pathscale:perftools:perftools-lite:petsc:petsc-complex:pgi:pmi:PrgEnv-cray:PrgEnv-gnu:PrgEnv-intel:PrgEnv-pathscale:PrgEnv-pgi:stat:totalview:tpsl:trilinos:xt-asyncpe:xt-craypat:xt-lgdb:xt-libsci:xt-mpich2:xt-mpt:xt-papi:xt-shmem:xt-totalview:/etc/opt/cray/modules/site_usermodules
MINICOM=-c on
PE_MPICH_GENCOMPILERS_GNU=8.2 7.1 5.1
PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64=8.2
PE_PKGCONFIG_DEFAULT_PRODUCTS=PE_TRILINOS:PE_TPSL_64:PE_TPSL:PE_PETSC:PE_PARALLEL_NETCDF:PE_NETCDF_HDF5PARALLEL:PE_NETCDF:PE_MPICH:PE_LIBSCI_ACC:PE_LIBSCI:PE_HDF5_PARALLEL:PE_HDF5:PE_GA:PE_FFTW:PE_ACML
PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5/1.10.0.1/@PRGENV@/@PE_HDF5_DEFAULT_GENCOMPS@/lib/pkgconfig
MODULE_VERSION=3.2.10.5
MAIL=/var/mail/bwjenkins
PATH=/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/EasyBuild/software/wget/1.19.4/bin:/sw/EasyBuild/software/git/2.17.0/bin:/sw/EasyBuild/software/cURL/7.59.0/bin:/sw/EasyBuild/software/OpenSSL/1.0.2m/bin:/sw/user/scripts:/sw/admin/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-7.5p1b/bin:/usr/local/gsi-openssh-7.5p1b/libexec:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-6.0/bin:/usr/local/globus-6.0/sbin:/opt/cray/mpt/7.7.4/gni/bin:/opt/torque/6.1.2/sbin:/opt/torque/6.1.2/bin:/opt/moab/9.1.2.h2/bin:/opt/moab/9.1.2.h2/sbin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/craype/2.5.16/bin:/opt/cray/cce/8.7.7/binutils/x86_64/x86_64-pc-linux-gnu/bin:/opt/cray/cce/8.7.7/binutils/cross/x86_64-aarch64/aarch64-linux-gnu/../bin:/opt/cray/cce/8.7.7/utils/x86_64/bin:/opt/cray/llm/default/bin:/opt/cray/llm/default/etc:/opt/cray/xpmem/0.1-2.0502.64982.7.26.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/cray/lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.44.1-1.0502.21728.75.3/sbin:/opt/cray/lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.44.1-1.0502.21728.75.3/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/bin:/opt/cray/sdb/1.1-1.0502.63652.4.27.gem/bin:/opt/cray/nodestat/2.2-1.0502.60539.1.31.gem/bin:/opt/modules/3.2.10.5/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:.:/usr/lib/qt3/bin:/opt/cray/bin
PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell=8.2
PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_skylake=8.2
PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl=86
PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU=8.2 5.1
PE_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1 4.9
PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64=64
PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64=153
PE_FFTW_DEFAULT_TARGET_abudhabi=abudhabi
ATP_IGNORE_SIGTERM=1
XTPE_NETWORK_TARGET=gemini
CPU=x86_64
SW_CONFIG=/scratch/system/bwjenkins/sw_config
PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64=64
PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU=51 49
PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU=51 49
PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
CRAY_PE_TARGET=x86-64
CRAY_CXX_IPA_LIBS_AARCH64=/opt/cray/cce/8.7.7/cce/aarch64/lib/libcray-c++-rts.a
CRAY_CCE_SHARE=/opt/cray/cce/8.7.7/cce/x86_64/share
JAVA_BINDIR=/opt/java/jdk1.8.0_51/bin
PE_TPSL_64_DEFAULT_VOLATILE_PRGENV=GNU GNU64
CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64
EBROOTOPENSSL=/sw/EasyBuild/software/OpenSSL/1.0.2m
PE_MPICH_VOLATILE_PRGENV=CRAY GNU PGI
CRAYPE_VERSION=2.5.16
CRAY_ALPS_POST_LINK_OPTS=-L/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64
INPUTRC=/u/system/bwjenkins/.inputrc
PWD=/mnt/abc/u/system/bwjenkins
XALT_TRANSMISSION_STYLE=directdb
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge=8.2 5.3
PE_MPICH_DEFAULT_GENCOMPS_CRAY=86
PE_LIBSCI_DEFAULT_OMP_REQUIRES=
INCLUDE_PATH_X86_64=/opt/cray/cce/8.7.7/cce/x86_64/include/craylibs
_LMFILES_=/opt/modulefiles/modules/3.2.10.5:/opt/cray/gem/modulefiles/nodestat/2.2-1.0502.60539.1.31.gem:/opt/cray/gem/modulefiles/sdb/1.1-1.0502.63652.4.27.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/modulefiles/lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.44.1-1.0502.21728.75.3:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.9.26.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.7.26.gem:/opt/modulefiles/hss-llm/7.2.0:/opt/modulefiles/Base-opts/1.0.2-1.0502.60680.2.4.gem:/opt/modulefiles/cce/8.7.7:/opt/cray/craype/2.5.16/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.16:/opt/cray/modulefiles/cray-libsci/18.12.1:/opt/cray/gem/modulefiles/pmi/5.0.11:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.1.0:/opt/cray/modulefiles/PrgEnv-cray/5.2.82:/opt/modulefiles/moab/9.1.2.h2-sles11:/opt/modulefiles/torque/6.1.2:/opt/cray/craype/2.5.16/modulefiles/craype-interlagos:/opt/cray/modulefiles/cray-mpich/7.7.4:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/6.0:/usr/local/modulefiles/gsissh/7.5p1b:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3
TARGETMODULES=/opt/modules/3.2.10.5/init/.targetmodules:craype-abudhabi:craype-abudhabi-cu:craype-accel-host:craype-accel-nvidia20:craype-accel-nvidia30:craype-accel-nvidia35:craype-barcelona:craype-broadwell:craype-haswell:craype-hugepages128K:craype-hugepages128M:craype-hugepages16M:craype-hugepages256M:craype-hugepages2M:craype-hugepages32M:craype-hugepages4M:craype-hugepages512K:craype-hugepages512M:craype-hugepages64M:craype-hugepages8M:craype-intel-knc:craype-interlagos:craype-interlagos-cu:craype-istanbul:craype-ivybridge:craype-mc12:craype-mc8:craype-mic-knl:craype-network-aries:craype-network-gemini:craype-network-infiniband:craype-network-none:craype-network-seastar:craype-sandybridge:craype-shanghai:craype-target-compute_node:craype-target-local_host:craype-target-native:craype-xeon:xtpe-barcelona:xtpe-interlagos:xtpe-interlagos-cu:xtpe-istanbul:xtpe-mc12:xtpe-mc8:xtpe-network-gemini:xtpe-network-seastar:xtpe-shanghai:xtpe-target-native:xtpe-xeon:/etc/opt/cray/modules/site_targetmodules
JAVA_HOME=/opt/java/jdk1.8.0_51
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_skylake=8.6
PE_LIBSCI_MODULE_NAME=cray-libsci/18.12.1
PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20=nv20
PE_INTEL_FIXED_PKGCONFIG_PATH=/opt/cray/mpt/7.7.4/gni/mpich-intel/16.0/lib/pkgconfig
PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_skylake=82
PE_LIBSCI_GENCOMPS_PGI_x86_64=153
PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3
LANG=en_US.UTF-8
JAVA_VERSION=jdk1.8.0_51
PE_MPICH_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.7.4/gni/mpich-@PRGENV@@PE_MPICH_DIR_DEFAULT64@/@PE_MPICH_GENCOMPS@/lib/pkgconfig
MOABHOMEDIR=/var/spool/moab
PE_MPICH_NV_LIBS_nvidia20=-lcudart
PE_LIBSCI_GENCOMPILERS_CRAY_x86_64=8.6
PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/acml/5.3.1/@PE_ACML_DEFAULT_DIR@@PE_ACML_DEFAULT_TARGET@@PE_ACML_DEFAULT_DIR_OPENMP@@PE_ACML_DEFAULT_DIR_DEFAULT64@/lib/pkgconfig
MODULEPATH=/sw/EasyBuild/modules/all:/sw/bw/modulefiles:/sw/xe/modulefiles:/usr/local/modulefiles:/opt/cray/craype/2.5.16/modulefiles:/opt/cray/gem/modulefiles:/opt/cray/modulefiles:/opt/modulefiles
PYTHONSTARTUP=/etc/pythonstart
SHMEM_ABORT_ON_ERROR=1
LOADEDMODULES=modules/3.2.10.5:nodestat/2.2-1.0502.60539.1.31.gem:sdb/1.1-1.0502.63652.4.27.gem:alps/5.2.4-2.0502.9774.31.12.gem:lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.44.1-1.0502.21728.75.3:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:gni-headers/4.0-1.0502.10859.9.26.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:xpmem/0.1-2.0502.64982.7.26.gem:hss-llm/7.2.0:Base-opts/1.0.2-1.0502.60680.2.4.gem:cce/8.7.7:craype-network-gemini:craype/2.5.16:cray-libsci/18.12.1:pmi/5.0.11:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.1.0:PrgEnv-cray/5.2.82:moab/9.1.2.h2-sles11:torque/6.1.2:craype-interlagos:cray-mpich/7.7.4:java/jdk1.8.0_51:globus/6.0:gsissh/7.5p1b:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3
SDK_HOME=/usr/lib64/jvm/java
PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos=82
PE_PKG_CONFIG_PATH=/opt/cray/cti/1.0.4/lib/pkgconfig:/opt/cray/cti/1.0.1/lib/pkgconfig
PE_FFTW_DEFAULT_TARGET_x86_skylake=x86_skylake
PE_FFTW_DEFAULT_TARGET_share=share
PE_FFTW_DEFAULT_TARGET_ivybridge=ivybridge
CRAY_BINUTILS_ROOT_X86_64=/opt/cray/cce/8.7.7/binutils/x86_64/x86_64-pc-linux-gnu/../
CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64
MYPROXY_SERVER=tfca.ncsa.illinois.edu
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_skylake=8.2 7.3
PE_LIBSCI_OMP_REQUIRES_openmp=_mp
CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/include -I/opt/cray/krca/1.0.0-2.0502.67049.8.29.gem/include -I/opt/cray-hss-devel/7.2.0/include 
PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx
CRAY_MPICH_DIR=/opt/cray/mpt/7.7.4/gni/mpich-cray/8.6
LM_LICENSE_FILE=1701@141.142.192.215:1701@141.142.192.216:1703@141.142.192.215:1703@141.142.192.216:1705@141.142.192.215:1705@141.142.192.216:1707@141.142.192.215:1707@141.142.192.216
PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_ALTERNATE_LIBS_@multithreaded@:PE_MPICH_ALTERNATE_LIBS_@dpm@
PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64=160
PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64=4.9
CRAY_BINUTILS_BIN_AARCH64=/opt/cray/cce/8.7.7/binutils/cross/x86_64-aarch64/aarch64-linux-gnu/bin
PE_MPICH_PKGCONFIG_LIBS=mpich
CRAY_MPICH2_VER=7.7.4
PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/18.06.1/@PRGENV@/@PE_TPSL_DEFAULT_GENCOMPS@/@PE_TPSL_DEFAULT_TARGET@/lib/pkgconfig
PE_HDF5_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/5.0.11/lib64
CRAY_CC_VERSION=8.7.7
EBVERSIONGNUPLOT=5.0.5
PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
PE_NETCDF_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
PE_MPICH_ALTERNATE_LIBS_multithreaded=_mt
PE_LIBSCI_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/18.12.1/@PRGENV@/@PE_LIBSCI_GENCOMPS@/@PE_LIBSCI_TARGET@/lib/pkgconfig
PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64=49
PE_GA_DEFAULT_GENCOMPILERS_GNU=8.2 7.3 5.3
EBVERSIONGIT=2.17.0
PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell=82
PE_PKGCONFIG_PRODUCTS_DEFAULT=PE_PAPI
PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU
PE_MPICH_TARGET_VAR_nvidia35=-lcudart
PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU
CRAY_LIBSCI_VERSION=18.12.1
QT_SYSTEM_DIR=/usr/share/desktop-data
JDK_HOME=/usr/lib64/jvm/java
SHLVL=1
HOME=/u/system/bwjenkins
CURL_INCLUDES=/sw/EasyBuild/software/cURL/7.59.0/include
GLOBUS_TCP_PORT_RANGE=50000,51000
PE_LIBSCI_GENCOMPILERS_PGI_x86_64=15.3
LESS_ADVANCED_PREPROCESSOR=no
OSTYPE=linux
EBDEVELCURL=/sw/EasyBuild/software/cURL/7.59.0/easybuild/cURL-7.59.0-easybuild-devel
PE_TPSL_DEFAULT_VOLATILE_PRGENV=GNU GNU64
PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.6
PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.7.4/gni/mpich-@PRGENV@@PE_MPICH_DEFAULT_DIR_DEFAULT64@/@PE_MPICH_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_ACML_DEFAULT_DIR_OPENMP=_mp
LINKER_X86_64=/opt/cray/cce/8.7.7/binutils/x86_64/x86_64-pc-linux-gnu/bin/ld
CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/5.0.11/include
XCURSOR_THEME=crystalwhite
LS_OPTIONS=-N --color=none -T 0
DYLD_LIBRARY_PATH=/usr/local/globus-6.0/lib
PE_MPICH_DIR_CRAY_DEFAULT64=64
PKG_CONFIG_PATH_DEFAULT=/opt/cray/papi/5.6.0.5/lib64/pkgconfig
CRAYLMD_LICENSE_FILE=/opt/cray/cce/cce.lic
ATP_MRNET_COMM_PATH=/opt/cray/atp/2.1.0/libexec/atp_mrnet_commnode_wrapper
CRAYPE_NETWORK_TARGET=gemini
CRAY_LLM_DIR=/opt/cray/llm/default
PRGENVMODULES=/opt/modules/3.2.10.5/init/.prgenvmodules:PrgEnv-cray:PrgEnv-gnu:PrgEnv-intel:PrgEnv-pathscale:PrgEnv-pgi
WINDOWMANAGER=
EBROOTGNUPLOT=/sw/EasyBuild/software/gnuplot/5.0.5
EBVERSIONWGET=1.19.4
PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos=8.2
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell=8.2 5.3
PE_LEVEL=8.7
EBROOTCURL=/sw/EasyBuild/software/cURL/7.59.0
PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_HDF5_PARALLEL:PE_NETCDF_HDF5PARALLEL:PE_LIBSCI:PE_TPSL
PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64=82
PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell=8.2
PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5
PE_MPICH_NV_LIBS=
PE_HDF5_DEFAULT_GENCOMPS_GNU=51 49
CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/18.12.1/CRAY/8.6/x86_64
CRAYLIBS_X86_64=/opt/cray/cce/8.7.7/cce/x86_64/lib
CRAYLIBS_AARCH64=/opt/cray/cce/8.7.7/cce/aarch64/lib
PYTHONPATH=/sw/tools/bin:/sw/tools/bin:/opt/xalt/0.7.6/sles11.3/libexec:/opt/cray/sdb/1.1-1.0502.63652.4.27.gem/lib64/py
CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/4.0-1.0502.10859.9.26.gem/include
G_FILENAME_ENCODING=@locale,UTF-8,ISO-8859-15,CP1252
LESS=-M -I
MACHTYPE=x86_64-suse-linux
LOGNAME=bwjenkins
PE_MPICH_GENCOMPS_CRAY=86
PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64=82
PE_MPICH_DEFAULT_GENCOMPILERS_CRAY=8.6
PE_LIBSCI_OMP_REQUIRES=
DMAPP_ABORT_ON_ERROR=1
CVS_RSH=ssh
PE_MPICH_DEFAULT_GENCOMPS_GNU=82 71 51
PE_MPICH_DEFAULT_FIXED_PRGENV=INTEL
PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH
PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35=nv35
PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3
TOOLMODULES=/opt/modules/3.2.10.5/init/.toolmodules:apprentice:apprentice2:atp:chapel:cray-lgdb:craypat:craypkg-gen:cray-snplauncher:ddt:gdb:iobuf:papi:perftools:perftools-lite:stat:totalview:xt-craypat:xt-lgdb:xt-papi:xt-totalview:/etc/opt/cray/modules/site_toolmodules
XDG_DATA_DIRS=/usr/share:/etc/opt/kde3/share:/opt/kde3/share
SSH_CONNECTION=141.142.192.225 58516 141.142.175.10 22
PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge=8.2
PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/18.12.1/@PRGENV@/@PE_LIBSCI_DEFAULT_GENCOMPS@/@PE_LIBSCI_DEFAULT_TARGET@/lib/pkgconfig
PE_GA_DEFAULT_FIXED_PRGENV=CRAY PGI INTEL
MODULESHOME=/opt/modules/3.2.10.5
PELOCAL_PRGENV=true
PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/petsc/3.9.3.0/complex/@PRGENV@/@PE_PETSC_DEFAULT_GENCOMPS@/@PE_PETSC_DEFAULT_TARGET@/lib/pkgconfig
PE_MPICH_NV_LIBS_nvidia35=-lcudart
CRAY_CXX_IPA_LIBS_X86_64=/opt/cray/cce/8.7.7/cce/x86_64/lib/libcray-c++-rts.a
PKG_CONFIG_PATH=/sw/xe/darshan/3.1.3/darshan-3.1.3/lib/pkgconfig:/sw/EasyBuild/software/cURL/7.59.0/lib/pkgconfig:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib/pkgconfig:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/pkgconfig:/opt/cray/pmi/5.0.11/lib64/pkgconfig:/opt/cray/craype/2.5.16/pkg-config:/opt/cray/iobuf/2.0.8/lib/pkgconfig:/opt/cray/xpmem/0.1-2.0502.64982.7.26.gem/lib64/pkgconfig:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64/pkgconfig:/opt/cray/gni-headers/4.0-1.0502.10859.9.26.gem/lib64/pkgconfig:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64/pkgconfig:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64/pkgconfig:/opt/cray/atp/2.1.0/lib/pkgconfig
LESSOPEN=lessopen.sh %s
LIBSCI_BASE_DIR=/opt/cray/libsci/18.12.1
INCLUDE_PATH_AARCH64=/opt/cray/cce/8.7.7/cce/aarch64/include/craylibs
CRAY_BINUTILS_BIN_X86_64=/opt/cray/cce/8.7.7/binutils/x86_64/bin
SHLIB_PATH=/usr/local/globus-6.0/lib
ACLOCAL_PATH=/sw/EasyBuild/software/cURL/7.59.0/share/aclocal
PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge=82
PE_MPICH_NV_LIBS_nvidia60=-lcudart
PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_DEFAULT_OMP_REQUIRES_@openmp@:PE_SCI_EXT_LIBPATH:PE_SCI_EXT_LIBNAME
LIBSCI_VERSION=18.12.1
INFOPATH=/usr/local/info:/usr/share/info:/usr/info
CRAY_CPU_TARGET=interlagos
PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64=8.2
PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.8.1.4/PGI/17.10/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1.1/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1.1/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0.1/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0.1/PGI/15.3/lib/pkgconfig:/opt/cray/ga/5.3.0.9/PGI/17.10/lib/pkgconfig
PE_LIBSCI_GENCOMPILERS_INTEL_x86_64=16.0
PE_FFTW_DEFAULT_TARGET_broadwell=broadwell
CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini
CRAY_ALPS_INCLUDE_OPTS=-I/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/include
PE_MPICH_GENCOMPS_PGI=153
PE_PAPI_DEFAULT_ACCELL_FAMILY_LIBS=
PE_MPICH_DEFAULT_GENCOMPILERS_PGI=15.3
PE_LIBSCI_REQUIRED_PRODUCTS=PE_MPICH
CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0502.64982.7.26.gem/include
CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/include
LMOD_DIR=/opt/xalt/0.7.6/sles11.3
PE_LIBSCI_GENCOMPS_GNU_x86_64=81 71 51
PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64=8.1 7.1 5.1
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64=16.0
PE_FFTW_DEFAULT_TARGET_x86_64=x86_64
ATP_HOME=/opt/cray/atp/2.1.0
LESSCLOSE=lessclose.sh %s %s
PE_SMA_DEFAULT_DIR_PGI_DEFAULT64=64
PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell=16.0
PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos=8.2 5.3
PE_PAPI_DEFAULT_ACCEL_LIBS=
PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.8.1.4/INTEL/18.0/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1.1/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf/4.4.1.1/INTEL/15.0/lib/pkgconfig:/opt/cray/mpt/7.7.4/gni/mpich-intel/16.0/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0.1/INTEL/15.0/lib/pkgconfig:/opt/cray/hdf5/1.10.0.1/INTEL/15.0/lib/pkgconfig:/opt/cray/ga/5.3.0.9/INTEL/18.0/lib/pkgconfig
PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/ga/5.3.0.9/@PRGENV@/@PE_GA_DEFAULT_GENCOMPS@/lib/pkgconfig
PE_GA_DEFAULT_GENCOMPS_GNU=82 73 53
PE_FFTW_DEFAULT_TARGET_haswell=haswell
CRAYOS_VERSION=5.2.82
CC_X86_64=/opt/cray/cce/8.7.7/cce/x86_64
CRAY_LD_LIBRARY_PATH=/opt/cray/mpt/7.7.4/gni/mpich-cray/8.6/lib:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/pmi/5.0.11/lib64:/opt/cray/libsci/18.12.1/CRAY/8.6/x86_64/lib:/opt/cray/cce/8.7.7/cce/x86_64/lib:/opt/cray/xpmem/0.1-2.0502.64982.7.26.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64
G_BROKEN_FILENAMES=1
DARSHAN_LOGPATH=/projects/system/darshan/
EBVERSIONOPENSSL=1.0.2m
PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64=160
PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64=82 53
PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell=86
PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64=64
JAVA_ROOT=/opt/java/jdk1.8.0_51
COLORTERM=1
BASH_FUNC_modimp_tabcomplete_off()=() {  export MODIMP_AVAILABLE_MODULES="";
 complete -r module;
 rm -f /tmp/.modimp_available_${USER}_*
}
BASH_FUNC_modimp_module_to_stdout_on()=() {  if [ -f $HOME/.no_modimp ]; then
 return;
 fi;
 if [ -f $HOME/.no_modimp_warning ]; then
 echo "The file $HOME/.no_modimp_warning exists; modimp commands will not load.";
 return;
 fi;
 function moduleraw () 
 { 
 eval `${MODULESHOME}/bin/modulecmd bash $*`
 };
 function module () 
 { 
 if [[ $1 == "purge" ]]; then
 echo "";
 echo "BEWARE: Running \"module purge\" puts your environment in an unreliable state.";
 echo "Doing so makes it difficult to debug problems or for support staff to help";
 echo "you. Please structure your build so that you don't have to do this.";
 echo "";
 fi;
 if [[ $1 == "PrgEnvLoad" ]]; then
 PRGMOD=`echo $LOADEDMODULES | tr ":" "\n" | grep PrgEnv`;
 if [[ $PRGMOD == "" ]]; then
 moduleraw load $2 $3 $4 $5 $6 2&gt;&amp;1;
 return;
 fi;
 moduleraw swap $PRGMOD $2 $3 $4 $5 $6 2&gt;&amp;1;
 return;
 fi;
 moduleraw $* 2&gt;&amp;1
 };
 export -f moduleraw;
 export -f module
}
BASH_FUNC_moduleraw()=() {  eval `${MODULESHOME}/bin/modulecmd bash $*`
}
BASH_FUNC_autocomplete_modules()=() {  subcommands_list="load:add:show:display:available:unload:rm:list:swap:switch:use:unuse:PrgEnvLoad";
 read -a command_line_array &lt;&lt;&lt; "$COMP_LINE";
 num_command_line_elements=${#command_line_array[@]};
 if [[ $num_command_line_elements -eq 1 ]]; then
 echo "load";
 echo "add";
 echo "show";
 echo "display";
 echo "available";
 echo "unload";
 echo "rm";
 echo "list";
 echo "swap";
 echo "switch";
 echo "use";
 echo "unuse";
 echo "PrgEnvLoad";
 exit;
 fi;
 module_sub_command=${command_line_array[1]};
 being_completed=$2;
 being_completed_length=${#being_completed};
 loaded_modules_array=$(echo $LOADEDMODULES | tr ":" "\n");
 if [ $MODIMP_KEEP_MODULE_LIST_IN_ENV != "yes" ]; then
 dated_modulefile_name="/tmp/.modimp_available_${USER}_`date +%Y_%m_%d`";
 if [ ! -f ${dated_modulefile_name} ]; then
 autocomplete_modules_setup;
 fi;
 read -r MODIMP_AVAILABLE_MODULES &lt; ${dated_modulefile_name};
 fi;
 available_modules_array=$(echo $MODIMP_AVAILABLE_MODULES | tr ":" "\n");
 case "$module_sub_command" in 
 load | add | show | display | available | avail)
 possible_completions_array=("${available_modules_array[@]}")
 ;;
 unload | rm | list)
 possible_completions_array=("${loaded_modules_arraCloning into 'SWTools-BWCI'...
y[@]}")
 ;;
 PrgEnvLoad)
 PrgEnv_array=$(echo $MODIMP_AVAILABLE_MODULES | tr ":" "\n" | grep PrgEnv);
 possible_completions_array=("${PrgEnv_array[@]}")
 ;;
 swap | switch)
 case "$num_command_line_elements" in 
 2)
 possible_completions_array=("${loaded_modules_array[@]}")
 ;;
 4)
 possible_completions_array=("${available_modules_array[@]}")
 ;;
 3)
 if [[ $being_completed_length -eq 0 ]]; then
 initial_completions_array=("${available_modules_array[@]}");
 raw_module_to_be_swapped=${command_line_array[2]};
 position_of_slash=$(echo $raw_module_to_be_swapped | grep -b -o "/" | awk 'BEGIN {FS=":"}{print $1}');
 second_completions_array="";
 if [[ $position_of_slash -gt 0 ]]; then
 base_module_length=$position_of_slash;
 else
 base_module_length=${#raw_module_to_be_swapped};
 fi;
 module_name_prefix=${raw_module_to_be_swapped:0:6};
 if [[ $module_name_prefix == "PrgEnv" ]]; then
 base_module_length=6;
 fi;
 base_module_to_be_swapped=${raw_module_to_be_swapped:0:base_module_length};
 version_length=${#raw_module_to_be_swapped}-position_of_slash-1;
 for comp in $initial_completions_array;
 do
 match_string=${comp:0:base_module_length};
 if [ $match_string == $base_module_to_be_swapped ]; then
 second_completions_array+=$comp;
 second_completions_array+=":";
 fi;
 done;
 possible_completions_array=$(echo $second_completions_array | tr ":" "\n");
 else
 possible_completions_array=("${loaded_modules_array[@]}");
 fi
 ;;
 esac
 ;;
 use | unuse)
 dir_completions=(`ls -1 -d -p ${being_completed}* 2&gt;/dev/null`);
 num_possible=${#dir_completions[@]};
 blah="\t";
 if (( num_possible == 1 )); then
 echo ${dir_completions[0]};
 echo ${dir_completions[0]}$blah;
 else
 for item in "${dir_completions[@]}";
 do
 echo $item;
 done;
 fi;
 return
 ;;
 *)
 if [[ $3 == "module" ]]; then
 possible_completions_array=$(echo $subcommands_list | tr ":" "\n");
 fi
 ;;
 esac;
 if [[ $being_completed_length -eq 0 ]]; then
 for x in $possible_completions_array;
 do
 echo "$x";
 done;
 else
 for x in $possible_completions_array;
 do
 match_string=${x:0:being_completed_length};
 if [ $match_string == $being_completed ]; then
 echo "$x";
 fi;
 cray_prepended_length=$(($being_completed_length+5));
 cray_prepended_match_string=${x:0:cray_prepended_length};
 cray_prepended_being_completed="cray-";
 cray_prepended_being_completed+=$being_completed;
 if [ $cray_prepended_match_string == $cray_prepended_being_completed ]; then
 echo "$x";
 fi;
 craype_prepended_length=$(($being_completed_length+7));
 craype_prepended_match_string=${x:0:craype_prepended_length};
 craype_prepended_being_completed="craype-";
 craype_prepended_being_completed+=$being_completed;
 if [ $craype_prepended_match_string == $craype_prepended_being_completed ]; then
 echo "$x";
 fi;
 xt_prepended_length=$(($being_completed_length+3));
 xt_prepended_match_string=${x:0:xt_prepended_length};
 xt_prepended_being_completed="xt-";
 xt_prepended_being_completed+=$being_completed;
 if [[ $xt_prepended_match_string == $xt_prepended_being_completed ]]; then
 echo "$x";
 fi;
 done;
 fi
}
BASH_FUNC_modimp_show_all_if_ambiguous_on()=() {  if [ -f $HOME/.no_modimp ]; then
 return;
 fi;
 if [ -f $HOME/.no_modimp_warning ]; then
 echo "The file $HOME/.no_modimp_warning exists; modimp commands will not load.";
 return;
 fi;
 bind 'set show-all-if-ambiguous on'
}
BASH_FUNC_modimp_tabcomplete_on()=() {  if [ -f $HOME/.no_modimp ]; then
 return;
 fi;
 if [ -f $HOME/.no_modimp_warning ]; then
 echo "The file $HOME/.no_modimp_warning exists; modimp commands will not load.";
 return;
 fi;
 autocomplete_modules_setup;
 complete -C autocomplete_modules module
}
BASH_FUNC_module()=() {  if [[ $1 == "purge" ]]; then
 echo "";
 echo "BEWARE: Running \"module purge\" puts your environment in an unreliable state.";
 echo "Doing so makes it difficult to debug problems or for support staff to help";
 echo "you. Please structure your build so that you don't have to do this.";
 echo "";
 fi;
 if [[ $1 == "PrgEnvLoad" ]]; then
 PRGMOD=`echo $LOADEDMODULES | tr ":" "\n" | grep PrgEnv`;
 if [[ $PRGMOD == "" ]]; then
 moduleraw load $2 $3 $4 $5 $6 2&gt;&amp;1;
 return;
 fi;
 moduleraw swap $PRGMOD $2 $3 $4 $5 $6 2&gt;&amp;1;
 return;
 fi;
 moduleraw $* 2&gt;&amp;1
}
BASH_FUNC_autocomplete_modules_setup()=() {  if [ $MODIMP_KEEP_MODULE_LIST_IN_ENV != "yes" ]; then
 dated_modulefile_name="/tmp/.modimp_available_${USER}_`date +%Y_%m_%d`";
 if [ ! -e ${dated_modulefile_name} ]; then
 rm -f /tmp/.modimp_available_${USER}_*;
 fi;
 fi;
 MODIMP_AVAILABLE_MODULES="";
 mod_dir_list=$(echo $MODULEPATH | tr ":" "\n");
 for moddir in $mod_dir_list;
 do
 directory_name_length=${#moddir};
 file_list=$(find $moddir 2&gt; /dev/null);
 for filename in $file_list;
 do
 modname_position=$(($directory_name_length+1));
 modname_and_version_length=$((${#filename}-$modname_position));
 modulename_and_version=${filename:$modname_position:$modname_and_version_length};
 modname_leading_character=${modulename_and_version:0:1};
 if [[ $modname_leading_character == "." ]]; then
 continue;
 fi;
 if [[ $modulename_and_version =~ \/\. ]]; then
 continue;
 fi;
 MODIMP_AVAILABLE_MODULES+=$modulename_and_version;
 MODIMP_AVAILABLE_MODULES+=":";
 done;
 done;
 if [ $MODIMP_KEEP_MODULE_LIST_IN_ENV != "yes" ]; then
 echo $MODIMP_AVAILABLE_MODULES &gt; ${dated_modulefile_name};
 export MODIMP_AVAILABLE_MODULES="";
 else
 export MODIMP_AVAILABLE_MODULES;
 fi
}
BASH_FUNC_modimp_show_all_if_ambiguous_off()=() {  bind 'set show-all-if-ambiguous off'
}
BASH_FUNC_modimp_module_to_stdout_off()=() {  function module () 
 { 
 if [[ $1 == "purge" ]]; then
 echo "";
 echo "BEWARE: Running \"module purge\" puts your environment in an unreliable state.";
 echo "Doing so makes it difficult to debug problems or for support staff to help";
 echo "you. Please structure your build so that you don't have to do this.";
 echo "";
 fi;
 eval `${MODULESHOME}/bin/modulecmd bash $*`
 };
 export -f module
}
BASH_FUNC_modimp_resync()=() {  rm -f /dev/shm/.modimp_available_${USER}_*;
 autocomplete_modules_setup
}
_=/usr/bin/env
swbuild -s -a lammps -v 15May15 -b cle5.2_gnu4.9.3
# clear out old installation to prevent potential libtool chmod 
# commands from failing when reinstalled by another person
rm -rf bin lib include doc share man etc libexec info

#clear out status file since re-making
rm -f status
rm -rf $SRCDIR

tar -xf /sw/sources/${PACKAGE}/${VERSION}/${PACKAGE}_stable.tar.gz
cd $SRCDIR

cd src/MAKE

cat &gt; Makefile.xe6 &lt;&lt; EOF
SHELL = /bin/sh
.SUFFIXES: .cpp .d
CC =            CC
CCFLAGS =       -O3 -ffast-math -fstrict-aliasing -fomit-frame-pointer -finline-functions -DLAMMPS_MEMALIGN=64
SHFLAGS =       -fPIC
DEPFLAGS =      -M
LINK =          CC
LINKFLAGS =     -O
LIB =           -lquadmath
SIZE =          size
ARCHIVE =       ar
ARFLAGS =       -rc
SHLIBFLAGS =    -shared
LMP_INC =       -DLAMMPS_GZIP
MPI_INC =       -DMPICH_SKIP_MPICXX
MPI_PATH =
MPI_LIB =
FFT_INC =       -DFFT_FFTW3
FFT_PATH =
FFT_LIB = 
JPG_INC =
JPG_PATH =
JPG_LIB = 
EOF

tail -n 46 Makefile.mpi &gt;&gt; Makefile.xe6
cd ..

# Adding all packages
make yes-all
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package asphere
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package body
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package class2
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package colloid
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package coreshell
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package dipole
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package fld
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package gpu
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package granular
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package kim
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package kokkos
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package kspace
  updating package CORESHELL
  updating package GPU
  updating package KOKKOS
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package manybody
  updating package GPU
  updating package KOKKOS
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package mc
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package meam
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package misc
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package molecule
  updating package GPU
  updating package KOKKOS
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package mpiio
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package opt
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package peri
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package poems
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package python
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package qeq
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package reax
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package replica
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package rigid
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package shock
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package snap
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package srd
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package voronoi
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package xtc
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package user-atc
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package user-awpmd
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package user-cg-cmm
  updating package GPU
  updating src/pair_lj_sdk_coul_long_gpu.cpp
  updating src/pair_lj_sdk_coul_long_gpu.h
  updating src/pair_lj_sdk_gpu.cpp
  updating src/pair_lj_sdk_gpu.h
  updating package KOKKOS
  updating src/pair_lj_sdk_kokkos.cpp
  updating src/pair_lj_sdk_kokkos.h
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Installing package user-colvars
make[1]: Leaving directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
make[1]: Entering directory `/mnt/abc/scratch/system/bwjenkins/tests/lammps/15May15/cle5.2_gnu4.9.3/lammps-15May15/src'
Build was aborted
Aborted by <a href='/user/arnoldg' class='jenkins-table__link model-link model-link--float'>arnoldg</a>
Recording plot data
Saving plot series data from: /var/lib/jenkins/workspace/LAMMPS/cputime
Saving plot series data from: /var/lib/jenkins/workspace/LAMMPS/memory
Finished: ABORTED