Started by user jkwack2
[EnvInject] - Loading node environment variables.
Building on master in workspace /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs
executing script:
# Moving to the building folder
cd SPP-PPM/PPM-1280-132XEs
ls -al
# Updating modules
module unload darshan
module load craype-hugepages2M
module list
# Building the executable
rm -rf iq.h *.o PPM2F-1280
cc -c cio.c
./compile-JK-noPapi 1280
ls -al
# Submitting the job script
MYJOBID=`qsub run-JK`
echo MYJOBID=$MYJOBID
# Waiting for the job completion
cat -n wait_for.sh
./wait_for.sh $MYJOBID
total 25204
drwxr-xr-x 2 bwjenkins BW_System 4096 Mar 29 10:14 .
drwxr-xr-x 4 bwjenkins BW_System 4096 Mar 29 09:46 ..
-rw-r--r-- 1 bwjenkins BW_System 1255 Oct 12 15:07 cio.c
-rw-r--r-- 1 bwjenkins BW_System 4088 Mar 29 10:13 cio.o
-rwxr--r-- 1 bwjenkins BW_System 459 Mar 29 10:12 compile-JK-noPapi
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 15:08 DATA1280.5818829.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5818829.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 16:23 DATA1280.5819321.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819321.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 17:11 DATA1280.5819500.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819500.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 1 12:42 DATA1280.5821932.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5821932.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 22 08:31 DATA1280.5927252.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5927252.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Mar 27 17:36 DATA1280.6407342.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.6407342.bw
-rw-r--r-- 1 bwjenkins BW_System 2775 Nov 30 16:05 FLOPS-PPM-JK-v01.py
-rwxr--r-- 1 bwjenkins BW_System 538 Mar 29 10:09 generate-MPICH_RANK_ORDER
-rw------- 1 bwjenkins BW_System 13 Mar 27 17:47 GFLOPS_SEC_NODE.dat
-rw-r--r-- 1 bwjenkins BW_System 2326 Oct 12 15:07 Instructions-JK.txt
-rw-r--r-- 1 bwjenkins BW_System 814 Oct 12 15:07 iq1280.h
lrwxrwxrwx 1 bwjenkins BW_System 8 Mar 29 10:13 iq.h -> iq1280.h
-rwxr-xr-x 1 bwjenkins BW_System 11186131 Mar 29 10:14 PPM2F-1280
-rw-r--r-- 1 bwjenkins BW_System 2280059 Oct 12 15:07 PPM2F-tp3-5-1-12-ICF-short-loops.F
-rw-r--r-- 1 bwjenkins BW_System 4475832 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.lst
-rw-r--r-- 1 bwjenkins BW_System 882304 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.o
-rw-r--r-- 1 bwjenkins BW_System 6375657 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.s
-rw------- 1 bwjenkins BW_System 6413 Nov 30 15:16 PPM4Fperf.ppm.5818829.bw
-rw------- 1 bwjenkins BW_System 6413 Nov 30 16:31 PPM4Fperf.ppm.5819321.bw
-rw------- 1 bwjenkins BW_System 6413 Nov 30 17:19 PPM4Fperf.ppm.5819500.bw
-rw------- 1 bwjenkins BW_System 6413 Dec 1 12:50 PPM4Fperf.ppm.5821932.bw
-rw------- 1 bwjenkins BW_System 6413 Dec 22 08:39 PPM4Fperf.ppm.5927252.bw
-rw------- 1 bwjenkins BW_System 6413 Mar 27 17:44 PPM4Fperf.ppm.6407342.bw
-rw------- 1 bwjenkins BW_System 1971 Nov 30 15:20 PPM-xe-1280.o5818829
-rw------- 1 bwjenkins BW_System 1971 Nov 30 16:35 PPM-xe-1280.o5819321
-rw------- 1 bwjenkins BW_System 1649 Nov 30 17:23 PPM-xe-1280.o5819500
-rw------- 1 bwjenkins BW_System 1649 Dec 1 12:54 PPM-xe-1280.o5821932
-rw------- 1 bwjenkins BW_System 1649 Dec 22 08:43 PPM-xe-1280.o5927252
-rw------- 1 bwjenkins BW_System 1649 Mar 27 17:47 PPM-xe-1280.o6407342
-rw-r--r-- 1 bwjenkins BW_System 837 Mar 29 10:12 run-JK
-rw-r--r-- 1 bwjenkins BW_System 101 Oct 12 15:08 source_me_JK
-rw------- 1 bwjenkins BW_System 73331 Nov 30 15:20 stderrout.5818829.bw
-rw------- 1 bwjenkins BW_System 73896 Nov 30 16:35 stderrout.5819321.bw
-rw------- 1 bwjenkins BW_System 73644 Nov 30 17:22 stderrout.5819500.bw
-rw------- 1 bwjenkins BW_System 72940 Dec 1 12:54 stderrout.5821932.bw
-rw------- 1 bwjenkins BW_System 72882 Dec 22 08:43 stderrout.5927252.bw
-rw------- 1 bwjenkins BW_System 71755 Mar 27 17:47 stderrout.6407342.bw
-rw------- 1 bwjenkins BW_System 12 Mar 27 17:47 TFLOPS_SEC-AGG.dat
-rwxr--r-- 1 bwjenkins BW_System 223 Oct 18 16:32 wait_for.sh
Currently Loaded Modulefiles:
1) modules/3.2.10.4
2) eswrap/1.3.3-1.020200.1278.0
3) cce/8.4.6
4) craype-network-gemini
5) craype/2.5.8
6) cray-libsci/16.11.1
7) udreg/2.3.2-1.0502.10518.2.17.gem
8) ugni/6.0-1.0502.10863.8.28.gem
9) pmi/5.0.10-1.0000.11050.179.3.gem
10) dmapp/7.0.1-1.0502.11080.8.74.gem
11) gni-headers/4.0-1.0502.10859.7.8.gem
12) xpmem/0.1-2.0502.64982.5.3.gem
13) dvs/2.5_0.9.0-1.0502.2188.1.113.gem
14) alps/5.2.4-2.0502.9774.31.12.gem
15) rca/1.0.0-2.0502.60530.1.63.gem
16) atp/2.0.4
17) PrgEnv-cray/5.2.82
18) cray-mpich/7.5.0
19) craype-interlagos
20) torque/6.0.3
21) moab/9.0.2.TAS2-1477409647_6706986-sles11
22) java/jdk1.8.0_51
23) globus/5.2.5
24) gsissh/6.2p2
25) scripts
26) user-paths
27) xalt/0.7.6
28) craype-hugepages2M
if (ifthunder .gt. 0) fv1 = .01
ftn-7212 crayftn: WARNING SETCONSTS, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 2913
Variable "ifthunder" is used before it is defined.
call setconsts (g,TransitionThickness,DisplaceAmpl,power,
ftn-7212 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4008
Variable "ifthunder" is used before it is defined.
call setaaa (g,TransitionThickness,DisplaceAmpl,
^
ftn-3141 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4119, Column = 12
Static variable "yavglob" in "master" overlaps a callee static variable "aaa" in "setaaa".
write (6,*) (perfdata(ioff+i),i=1,53),' mysrc =',mysrc
ftn-7212 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4350
Variable "mysrc" is used before it is defined.
return
^
ftn-362 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 5333, Column = 7
This statement can not be reached.
write (6,*) 'jj =',jj,' jbrick =',jbrick
ftn-7212 crayftn: WARNING BUILDPROF, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 6841
Variable "jbrick" is used before it is defined.
call setconsts (g,TransitionThickness,DisplaceAmpl,power,
ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 9492
Variable "ifthunder" is used before it is defined.
call setaaa (g,TransitionThickness,DisplaceAmpl,
^
ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 10254, Column = 12
Static variable "globthist" in "workerbee" overlaps a callee static variable "aaa" in "setaaa".
deet = abs(time- (scalabilityt2 + scalabilitytimed/8) )
ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 12889
Variable "scalabilityt2" is used before it is defined.
deet = abs(time- (scalabilityt3 + scalabilitytimed/8))
ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 12899
Variable "scalabilityt3" is used before it is defined.
call updatesubbrickx(ibrick,jbrick,kbrick,mbrick,
^
ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 14001, Column = 12
Static variable "aaagrid" in "workerbee" overlaps a callee static variable "zzf" in "updatesubbrickx".
call updatesubbrickz(ibrick,jbrick,kbrick,mbrick,
^
ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 14251, Column = 12
Static variable "aaagrid" in "workerbee" overlaps a callee static variable "zzf" in "updatesubbrickz".
total 23445
drwxr-xr-x 2 bwjenkins BW_System 4096 Mar 29 10:17 .
drwxr-xr-x 4 bwjenkins BW_System 4096 Mar 29 09:46 ..
-rw-r--r-- 1 bwjenkins BW_System 1255 Oct 12 15:07 cio.c
-rw-r--r-- 1 bwjenkins BW_System 4088 Mar 29 10:16 cio.o
-rwxr--r-- 1 bwjenkins BW_System 459 Mar 29 10:12 compile-JK-noPapi
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 15:08 DATA1280.5818829.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5818829.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 16:23 DATA1280.5819321.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819321.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 17:11 DATA1280.5819500.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819500.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 1 12:42 DATA1280.5821932.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5821932.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 22 08:31 DATA1280.5927252.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5927252.bw
lrwxrwxrwx 1 bwjenkins BW_System 53 Mar 27 17:36 DATA1280.6407342.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.6407342.bw
-rw-r--r-- 1 bwjenkins BW_System 2775 Nov 30 16:05 FLOPS-PPM-JK-v01.py
-rwxr--r-- 1 bwjenkins BW_System 538 Mar 29 10:09 generate-MPICH_RANK_ORDER
-rw------- 1 bwjenkins BW_System 13 Mar 27 17:47 GFLOPS_SEC_NODE.dat
-rw-r--r-- 1 bwjenkins BW_System 2326 Oct 12 15:07 Instructions-JK.txt
-rw-r--r-- 1 bwjenkins BW_System 814 Oct 12 15:07 iq1280.h
lrwxrwxrwx 1 bwjenkins BW_System 8 Mar 29 10:16 iq.h -> iq1280.h
-rwxr-xr-x 1 bwjenkins BW_System 11186131 Mar 29 10:17 PPM2F-1280
-rw-r--r-- 1 bwjenkins BW_System 2280059 Oct 12 15:07 PPM2F-tp3-5-1-12-ICF-short-loops.F
-rw-r--r-- 1 bwjenkins BW_System 4475832 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.lst
-rw-r--r-- 1 bwjenkins BW_System 882304 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.o
-rw-r--r-- 1 bwjenkins BW_System 6375661 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.s
-rw------- 1 bwjenkins BW_System 6413 Nov 30 15:16 PPM4Fperf.ppm.5818829.bw
-rw------- 1 bwjenkins BW_System 6413 Nov 30 16:31 PPM4Fperf.ppm.5819321.bw
-rw------- 1 bwjenkins BW_System 6413 Nov 30 17:19 PPM4Fperf.ppm.5819500.bw
-rw------- 1 bwjenkins BW_System 6413 Dec 1 12:50 PPM4Fperf.ppm.5821932.bw
-rw------- 1 bwjenkins BW_System 6413 Dec 22 08:39 PPM4Fperf.ppm.5927252.bw
-rw------- 1 bwjenkins BW_System 6413 Mar 27 17:44 PPM4Fperf.ppm.6407342.bw
-rw------- 1 bwjenkins BW_System 1971 Nov 30 15:20 PPM-xe-1280.o5818829
-rw------- 1 bwjenkins BW_System 1971 Nov 30 16:35 PPM-xe-1280.o5819321
-rw------- 1 bwjenkins BW_System 1649 Nov 30 17:23 PPM-xe-1280.o5819500
-rw------- 1 bwjenkins BW_System 1649 Dec 1 12:54 PPM-xe-1280.o5821932
-rw------- 1 bwjenkins BW_System 1649 Dec 22 08:43 PPM-xe-1280.o5927252
-rw------- 1 bwjenkins BW_System 1649 Mar 27 17:47 PPM-xe-1280.o6407342
-rw-r--r-- 1 bwjenkins BW_System 837 Mar 29 10:12 run-JK
-rw-r--r-- 1 bwjenkins BW_System 101 Oct 12 15:08 source_me_JK
-rw------- 1 bwjenkins BW_System 73331 Nov 30 15:20 stderrout.5818829.bw
-rw------- 1 bwjenkins BW_System 73896 Nov 30 16:35 stderrout.5819321.bw
-rw------- 1 bwjenkins BW_System 73644 Nov 30 17:22 stderrout.5819500.bw
-rw------- 1 bwjenkins BW_System 72940 Dec 1 12:54 stderrout.5821932.bw
-rw------- 1 bwjenkins BW_System 72882 Dec 22 08:43 stderrout.5927252.bw
-rw------- 1 bwjenkins BW_System 71755 Mar 27 17:47 stderrout.6407342.bw
-rw------- 1 bwjenkins BW_System 12 Mar 27 17:47 TFLOPS_SEC-AGG.dat
-rwxr--r-- 1 bwjenkins BW_System 223 Oct 18 16:32 wait_for.sh
Job submitted to account: jnc
MYJOBID=6413639.bw
1 #!/bin/bash
2 echo "=== RUNNING $0 ==="
3
4 while true
5 do
6
7 MYQSTAT=`qstat $1`
8 if test "$MYQSTAT" = ""
9 then
10 echo $1 finished
11 exit
12 else
13 DATE=`date`
14 echo "$DATE: waiting for $1 to finish"
15
16 fi
17
18 sleep 5m
19
20 done
21
22
=== RUNNING ./wait_for.sh ===
Wed Mar 29 10:17:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:22:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:27:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:32:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:37:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:42:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:47:11 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:52:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 10:57:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:02:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:07:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:12:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:17:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:22:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:27:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:32:12 CDT 2017: waiting for 6413639.bw to finish
Wed Mar 29 11:37:12 CDT 2017: waiting for 6413639.bw to finish
Build was aborted
Aborted by jkwack2
Recording plot data
Saving plot series data from: /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs/GFLOPS_SEC_NODE.dat
Saving plot series data from: /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs/TFLOPS_SEC-AGG.dat
Finished: ABORTED