Started by user arnoldg Building on master in workspace /var/lib/jenkins/workspace/rmg-spp-newpe executing script: PATH="/sw/tools/bin:/sw/tools/bin:$PATH" HOME="/var/lib/jenkins" set -v # specify installation directory export INSTDIR=~/rmg-spp #rm -rf $INSTDIR mkdir $INSTDIR # begin newpe testing module unload cce cray-mpich module load cce/8.5.5 module load cray-mpich/7.5.0 # end newpe testing module swap PrgEnv-cray PrgEnv-gnu module swap gcc gcc/4.9.3 module load boost module load cmake/3.1.3 module load fftw export CRAYPE_LINK_TYPE=dynamic export CRAY_ADD_RPATH=yes # install openbabel library cd $INSTDIR wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz tar zxvf openbabel-2.3.2.tar.gz cd openbabel-2.3.2/ mkdir build cd build/ cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install .. nice make -j8 make install export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib export CC=cc export CXX=CC export FC=ftn # install plplot library cd $INSTDIR git clone git://git.code.sf.net/p/plplot/plplot plplot.git cd plplot.git/ mkdir build cd build cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install .. make make install # install CPU-version of RMG cd $INSTDIR wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz tar zxvf rmg-release_2.1.tar.gz cd rmg-release_2.1 mkdir build-cpu; cd build-cpu cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so .. nice make -j12 rmg-cpu rm -rf /u/system/bwjenkins/scratch/rmg-spp mkdir -p /u/system/bwjenkins/scratch/rmg-spp #cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs /u/system/bwjenkins/scratch/rmg-spp/run.pbs #cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu /u/system/bwjenkins/scratch/rmg-spp/ cp /projects/bluewaters/benchmarking/SPP/rmg/small/* /u/system/bwjenkins/scratch/rmg-spp/ cd /u/system/bwjenkins/scratch/rmg-spp cp /u/system/bwjenkins/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu ./ cat run.pbs | sed -e "s/aprun/time aprun/g" > myrunA.pbs cat myrunA.pbs | sed -e "s/OMP_NUM_THREADS=1/OM_NUM_THREADS=1\nexport LD_LIBRARY_PATH=\$LD_LIBRARY_PATH:\$HOME\/rmg-spp\/openbabel-2.3.2\/install\/lib/g" > myrun.pbs cat -n myrun.pbs MYJOBID=`qsub myrun.pbs` echo MYJOBID=$MYJOBID ~arnoldg/ior/wait_for.sh $MYJOBID tail *.log > ~/rmg-spp/rmg.logtail.txt grep "real" z302water_cpu100.o* MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime cat -n ~/rmg-spp/rmg.realtime # specify installation directory export INSTDIR=~/rmg-spp #rm -rf $INSTDIR mkdir $INSTDIR mkdir: cannot create directory `/var/lib/jenkins/rmg-spp': No such file or directory # begin newpe testing module unload cce cray-mpich module load cce/8.5.5 module load cray-mpich/7.5.0 # end newpe testing module swap PrgEnv-cray PrgEnv-gnu ${MODULESHOME}/bin/modulecmd bash $* CRAY_LD_LIBRARY_PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/CRAY/8.3/x86_64/lib ;export CRAY_LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:craype-network-gemini:craype/2.5.4:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-cray/5.2.82:craype-interlagos:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6 ;export LOADEDMODULES;MANPATH=/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_PKGCONFIG_LIBS=darshan-runtime:AtpSigHandler:cray-rca:libsci_mpi:libsci ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_LIBSCI ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-cray/5.2.82:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6 ;export _LMFILES_;unset ASSEMBLER_X86_64;unset CC_X86_64;unset CRAYLIBS_X86_64;unset CRAYLMD_LICENSE_FILE;unset CRAY_BINUTILS_BIN;unset CRAY_BINUTILS_ROOT;unset CRAY_BINUTILS_VERSION;unset CRAY_CC_VERSION;unset CRAY_CXX_IPA_LIBS;unset CRAY_FTN_VERSION;unset CRAY_MPICH2_DIR;unset CRAY_MPICH2_VER;unset CRAY_MPICH_BASEDIR;unset CRAY_MPICH_DIR;unset CRAY_MPICH_ROOTDIR;unset FORTRAN_SYSTEM_MODULE_NAMES;unset FTN_X86_64;unset GCC_X86_64;unset INCLUDE_PATH_X86_64;unset LINKER_X86_64;unset MPICH_DIR;unset NLSPATH;unset PE_CXX_PKGCONFIG_LIBS;unset PE_FORTRAN_PKGCONFIG_LIBS;unset PE_INTEL_FIXED_PKGCONFIG_PATH;unset PE_LEVEL;unset PE_MPICH_CXX_PKGCONFIG_LIBS;unset PE_MPICH_DIR_CRAY_DEFAULT64;unset PE_MPICH_DIR_PGI_DEFAULT64;unset PE_MPICH_FIXED_PRGENV;unset PE_MPICH_FORTRAN_PKGCONFIG_LIBS;unset PE_MPICH_GENCOMPILERS_CRAY;unset PE_MPICH_GENCOMPILERS_GNU;unset PE_MPICH_GENCOMPILERS_PGI;unset PE_MPICH_GENCOMPS_CRAY;unset PE_MPICH_GENCOMPS_GNU;unset PE_MPICH_GENCOMPS_PGI;unset PE_MPICH_MODULE_NAME;unset PE_MPICH_MULTITHREADED_LIBS_multithreaded;unset PE_MPICH_NV_LIBS;unset PE_MPICH_NV_LIBS_nvidia20;unset PE_MPICH_NV_LIBS_nvidia35;unset PE_MPICH_PKGCONFIG_LIBS;unset PE_MPICH_PKGCONFIG_VARIABLES;unset PE_MPICH_TARGET_VAR_nvidia20;unset PE_MPICH_TARGET_VAR_nvidia35;unset PE_MPICH_VOLATILE_PKGCONFIG_PATH;unset PE_MPICH_VOLATILE_PRGENV; ${MODULESHOME}/bin/modulecmd bash $* ASSEMBLER_AARCH64=/opt/cray/cce/8.5.5/aarch64-binutils/bin/aarch64-linux-gnu-as ;export ASSEMBLER_AARCH64;ASSEMBLER_X86_64=/opt/cray/cce/8.5.5/cray-binutils/x86_64-pc-linux-gnu/bin/as ;export ASSEMBLER_X86_64;CC_X86_64=/opt/cray/cce/8.5.5/CC/x86-64 ;export CC_X86_64;CRAYLIBS_AARCH64=/opt/cray/cce/8.5.5/craylibs/aarch64 ;export CRAYLIBS_AARCH64;CRAYLIBS_X86_64=/opt/cray/cce/8.5.5/craylibs/x86-64 ;export CRAYLIBS_X86_64;CRAYLMD_LICENSE_FILE=/opt/cray/cce/cce.lic ;export CRAYLMD_LICENSE_FILE;CRAY_BINUTILS_BIN=/opt/cray/cce/8.5.5/cray-binutils/x86_64-pc-linux-gnu/bin ;export CRAY_BINUTILS_BIN;CRAY_BINUTILS_BIN_AARCH64=/opt/cray/cce/8.5.5/aarch64-binutils/aarch64-unknowun-linux-gnu/bin ;export CRAY_BINUTILS_BIN_AARCH64;CRAY_BINUTILS_ROOT=/opt/cray/cce/8.5.5/cray-binutils ;export CRAY_BINUTILS_ROOT;CRAY_BINUTILS_ROOT_AARCH64=/opt/cray/cce/8.5.5/aarch64-binutils ;export CRAY_BINUTILS_ROOT_AARCH64;CRAY_BINUTILS_VERSION=/opt/cray/cce/8.5.5 ;export CRAY_BINUTILS_VERSION;CRAY_CC_VERSION=8.5.5 ;export CRAY_CC_VERSION;CRAY_CXX_IPA_LIBS=/opt/cray/cce/8.5.5/CC/x86-64/lib/x86-64/libcray-c++-rts.a ;export CRAY_CXX_IPA_LIBS;CRAY_CXX_IPA_LIBS_AARCH64=/opt/cray/cce/8.5.5/CC/x86-64/lib/aarch64/libcray-c++-rts.a ;export CRAY_CXX_IPA_LIBS_AARCH64;CRAY_FTN_VERSION=8.5.5 ;export CRAY_FTN_VERSION;CRAY_LD_LIBRARY_PATH=/opt/cray/cce/8.5.5/CC/x86-64/lib/x86-64:/opt/cray/cce/8.5.5/craylibs/x86-64:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/CRAY/8.3/x86_64/lib ;export CRAY_LD_LIBRARY_PATH;FORTRAN_SYSTEM_MODULE_NAMES=ftn_lib_definitions ;export FORTRAN_SYSTEM_MODULE_NAMES;FTN_X86_64=/opt/cray/cce/8.5.5/cftn/x86-64 ;export FTN_X86_64;GCC_AARCH64=/opt/gcc-cross-aarch64/4.8.1/aarch64 ;export GCC_AARCH64;GCC_X86_64=/opt/gcc/4.8.1/snos ;export GCC_X86_64;INCLUDE_PATH_AARCH64=/opt/cray/cce/8.5.5/craylibs/aarch64/include ;export INCLUDE_PATH_AARCH64;INCLUDE_PATH_X86_64=/opt/cray/cce/8.5.5/craylibs/x86-64/include ;export INCLUDE_PATH_X86_64;LINKER_AARCH64=/opt/cray/cce/8.5.5/aarch64-binutils/bin/aarch64-linux-gnu-ld ;export LINKER_AARCH64;LINKER_X86_64=/opt/cray/cce/8.5.5/cray-binutils/x86_64-pc-linux-gnu/bin/ld ;export LINKER_X86_64;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:craype-network-gemini:craype/2.5.4:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-cray/5.2.82:craype-interlagos:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cce/8.5.5 ;export LOADEDMODULES;MANPATH=/opt/cray/cce/8.5.5/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;NLSPATH=/opt/cray/cce/8.5.5/CC/x86-64/nls/En/%N.cat:/opt/cray/cce/8.5.5/craylibs/x86-64/nls/En/%N.cat:/opt/cray/cce/8.5.5/cftn/x86-64/nls/En/%N.cat ;export NLSPATH;PATH=/opt/cray/cce/8.5.5/cray-binutils/x86_64-pc-linux-gnu/bin:/opt/cray/cce/8.5.5/craylibs/x86-64/bin:/opt/cray/cce/8.5.5/cftn/bin:/opt/cray/cce/8.5.5/CC/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_LEVEL=8.5 ;export PE_LEVEL;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-cray/5.2.82:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/modulefiles/cce/8.5.5 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* CRAY_LD_LIBRARY_PATH=/opt/cray/mpt/7.5.0/gni/mpich-cray/8.4/lib:/opt/cray/cce/8.5.5/CC/x86-64/lib/x86-64:/opt/cray/cce/8.5.5/craylibs/x86-64:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/CRAY/8.3/x86_64/lib ;export CRAY_LD_LIBRARY_PATH;CRAY_MPICH2_DIR=/opt/cray/mpt/7.5.0/gni/mpich-cray/8.4 ;export CRAY_MPICH2_DIR;CRAY_MPICH2_VER=7.5.0 ;export CRAY_MPICH2_VER;CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.5.0/gni ;export CRAY_MPICH_BASEDIR;CRAY_MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-cray/8.4 ;export CRAY_MPICH_DIR;CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.5.0 ;export CRAY_MPICH_ROOTDIR;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:craype-network-gemini:craype/2.5.4:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-cray/5.2.82:craype-interlagos:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cce/8.5.5:cray-mpich/7.5.0 ;export LOADEDMODULES;MANPATH=/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/cce/8.5.5/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-cray/8.4 ;export MPICH_DIR;PATH=/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/cce/8.5.5/cray-binutils/x86_64-pc-linux-gnu/bin:/opt/cray/cce/8.5.5/craylibs/x86-64/bin:/opt/cray/cce/8.5.5/cftn/bin:/opt/cray/cce/8.5.5/CC/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_CXX_PKGCONFIG_LIBS;PE_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_FORTRAN_PKGCONFIG_LIBS;PE_INTEL_FIXED_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/mpich-intel/16.0/lib/pkgconfig ;export PE_INTEL_FIXED_PKGCONFIG_PATH;PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_MPICH_CXX_PKGCONFIG_LIBS;PE_MPICH_DIR_CRAY_DEFAULT64=64 ;export PE_MPICH_DIR_CRAY_DEFAULT64;PE_MPICH_DIR_PGI_DEFAULT64=64 ;export PE_MPICH_DIR_PGI_DEFAULT64;PE_MPICH_FIXED_PRGENV=INTEL ;export PE_MPICH_FIXED_PRGENV;PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_MPICH_FORTRAN_PKGCONFIG_LIBS;PE_MPICH_GENCOMPILERS_CRAY=8.4 ;export PE_MPICH_GENCOMPILERS_CRAY;PE_MPICH_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_MPICH_GENCOMPILERS_GNU;PE_MPICH_GENCOMPILERS_PGI=15.3 ;export PE_MPICH_GENCOMPILERS_PGI;PE_MPICH_GENCOMPS_CRAY=84 ;export PE_MPICH_GENCOMPS_CRAY;PE_MPICH_GENCOMPS_GNU=51\ 49 ;export PE_MPICH_GENCOMPS_GNU;PE_MPICH_GENCOMPS_PGI=153 ;export PE_MPICH_GENCOMPS_PGI;PE_MPICH_MODULE_NAME=cray-mpich ;export PE_MPICH_MODULE_NAME;PE_MPICH_MULTITHREADED_LIBS_multithreaded=_mt ;export PE_MPICH_MULTITHREADED_LIBS_multithreaded;PE_MPICH_NV_LIBS= ;export PE_MPICH_NV_LIBS;PE_MPICH_NV_LIBS_nvidia20=-lcudart ;export PE_MPICH_NV_LIBS_nvidia20;PE_MPICH_NV_LIBS_nvidia35=-lcudart ;export PE_MPICH_NV_LIBS_nvidia35;PE_MPICH_PKGCONFIG_LIBS=mpich ;export PE_MPICH_PKGCONFIG_LIBS;PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_MULTITHREADED_LIBS_@multithreaded@ ;export PE_MPICH_PKGCONFIG_VARIABLES;PE_MPICH_TARGET_VAR_nvidia20=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia20;PE_MPICH_TARGET_VAR_nvidia35=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia35;PE_MPICH_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/mpich-@PRGENV@@PE_MPICH_DIR_DEFAULT64@/@PE_MPICH_GENCOMPS@/lib/pkgconfig ;export PE_MPICH_VOLATILE_PKGCONFIG_PATH;PE_MPICH_VOLATILE_PRGENV=CRAY\ GNU\ PGI ;export PE_MPICH_VOLATILE_PRGENV;PE_PKGCONFIG_LIBS=mpich:darshan-runtime:AtpSigHandler:cray-rca:libsci_mpi:libsci ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-cray/5.2.82:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/modulefiles/cce/8.5.5:/opt/cray/modulefiles/cray-mpich/7.5.0 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* ATP_HOME=/opt/cray/atp/2.0.1 ;export ATP_HOME;ATP_IGNORE_SIGTERM=1 ;export ATP_IGNORE_SIGTERM;ATP_MRNET_COMM_PATH=/opt/cray/atp/2.0.1/libexec/atp_mrnet_commnode_wrapper ;export ATP_MRNET_COMM_PATH;ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/2.0.1/libApp/\ ;export ATP_POST_LINK_OPTS;CRAYOS_VERSION=5.2.82 ;export CRAYOS_VERSION;CRAYPE_DIR=/opt/cray/craype/2.5.4 ;export CRAYPE_DIR;CRAYPE_NETWORK_TARGET=gemini ;export CRAYPE_NETWORK_TARGET;CRAYPE_VERSION=2.5.4 ;export CRAYPE_VERSION;CRAY_ALPS_INCLUDE_OPTS=-I/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/include ;export CRAY_ALPS_INCLUDE_OPTS;CRAY_ALPS_POST_LINK_OPTS=-L/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64 ;export CRAY_ALPS_POST_LINK_OPTS;CRAY_CPU_TARGET=interlagos ;export CRAY_CPU_TARGET;CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/include\ -I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include\ ;export CRAY_DMAPP_INCLUDE_OPTS;CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64 ;export CRAY_DMAPP_POST_LINK_OPTS;CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include ;export CRAY_GNI_HEADERS_INCLUDE_OPTS;CRAY_LD_LIBRARY_PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/16.03.1 ;export CRAY_LIBSCI_BASE_DIR;CRAY_LIBSCI_DIR=/opt/cray/libsci/16.03.1 ;export CRAY_LIBSCI_DIR;CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/16.03.1/GNU/4.9/x86_64 ;export CRAY_LIBSCI_PREFIX_DIR;CRAY_LIBSCI_VERSION=16.03.1 ;export CRAY_LIBSCI_VERSION;CRAY_MPICH2_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH2_DIR;CRAY_MPICH2_VER=7.5.0 ;export CRAY_MPICH2_VER;CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.5.0/gni ;export CRAY_MPICH_BASEDIR;CRAY_MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH_DIR;CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.5.0 ;export CRAY_MPICH_ROOTDIR;CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/include ;export CRAY_PMI_INCLUDE_OPTS;CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64 ;export CRAY_PMI_POST_LINK_OPTS;CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini ;export CRAY_PRE_COMPILE_OPTS;CRAY_PRGENVGNU=loaded ;export CRAY_PRGENVGNU;CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/include\ -I/opt/cray/krca/1.0.0-2.0502.63139.4.30.gem/include\ -I/opt/cray-hss-devel/7.2.0/include\ ;export CRAY_RCA_INCLUDE_OPTS;CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64\ -lrca\ ;export CRAY_RCA_POST_LINK_OPTS;CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/include ;export CRAY_UDREG_INCLUDE_OPTS;CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64 ;export CRAY_UDREG_POST_LINK_OPTS;CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/include ;export CRAY_UGNI_INCLUDE_OPTS;CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64 ;export CRAY_UGNI_POST_LINK_OPTS;CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/include ;export CRAY_XPMEM_INCLUDE_OPTS;CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64 ;export CRAY_XPMEM_POST_LINK_OPTS;DMAPP_ABORT_ON_ERROR=1 ;export DMAPP_ABORT_ON_ERROR;DVS_INCLUDE_OPTS=-I/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/include ;export DVS_INCLUDE_OPTS;DVS_VERSION=0.9.0 ;export DVS_VERSION;GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INCLUDE_PATH_AARCH64=--PREMARKER-- ;export INCLUDE_PATH_AARCH64;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LIBSCI_BASE_DIR=/opt/cray/libsci/16.03.1 ;export LIBSCI_BASE_DIR;LIBSCI_VERSION=16.03.1 ;export LIBSCI_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-mpich/7.5.0:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.4/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;MODULEPATH=/sw/bw/modulefiles:/sw/xe/modulefiles:/usr/local/modulefiles:/opt/cray/gem/modulefiles:/opt/cray/craype/2.5.4/modulefiles:/opt/cray/modulefiles:/opt/modulefiles ;export MODULEPATH;MPICH_ABORT_ON_ERROR=1 ;export MPICH_ABORT_ON_ERROR;MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export MPICH_DIR;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.4/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_ACML_DEFAULT_DIR_CRAY=gfortran64 ;export PE_ACML_DEFAULT_DIR_CRAY;PE_ACML_DEFAULT_DIR_DEFAULT64=_int64 ;export PE_ACML_DEFAULT_DIR_DEFAULT64;PE_ACML_DEFAULT_DIR_GNU=gfortran64 ;export PE_ACML_DEFAULT_DIR_GNU;PE_ACML_DEFAULT_DIR_INTEL=ifort64 ;export PE_ACML_DEFAULT_DIR_INTEL;PE_ACML_DEFAULT_DIR_OPENMP=_mp ;export PE_ACML_DEFAULT_DIR_OPENMP;PE_ACML_DEFAULT_DIR_PGI=pgi64 ;export PE_ACML_DEFAULT_DIR_PGI;PE_ACML_DEFAULT_TARGET_interlagos=_fma4 ;export PE_ACML_DEFAULT_TARGET_interlagos;PE_ACML_DEFAULT_TARGET_x86_64= ;export PE_ACML_DEFAULT_TARGET_x86_64;PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/acml/5.3.1/@PE_ACML_DEFAULT_DIR@@PE_ACML_DEFAULT_TARGET@@PE_ACML_DEFAULT_DIR_OPENMP@@PE_ACML_DEFAULT_DIR_DEFAULT64@/lib/pkgconfig ;export PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf/4.4.0/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.8.16/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5/1.8.16/CRAY/8.3/lib/pkgconfig:/opt/cray/ga/5.3.0.6/CRAY/8.3/lib/pkgconfig ;export PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH;PE_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_CXX_PKGCONFIG_LIBS;PE_ENV=GNU ;export PE_ENV;PE_FFTW_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_DEFAULT_REQUIRED_PRODUCTS;PE_FFTW_DEFAULT_TARGET_broadwell=broadwell ;export PE_FFTW_DEFAULT_TARGET_broadwell;PE_FFTW_DEFAULT_TARGET_haswell=haswell ;export PE_FFTW_DEFAULT_TARGET_haswell;PE_FFTW_DEFAULT_TARGET_interlagos=interlagos ;export PE_FFTW_DEFAULT_TARGET_interlagos;PE_FFTW_DEFAULT_TARGET_mic_knl=mic_knl ;export PE_FFTW_DEFAULT_TARGET_mic_knl;PE_FFTW_DEFAULT_TARGET_sandybridge=sandybridge ;export PE_FFTW_DEFAULT_TARGET_sandybridge;PE_FFTW_DEFAULT_TARGET_x86_64=x86_64 ;export PE_FFTW_DEFAULT_TARGET_x86_64;PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.7/@PE_FFTW_DEFAULT_TARGET@/lib/pkgconfig ;export PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_FORTRAN_PKGCONFIG_LIBS;PE_GA_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_GA_DEFAULT_FIXED_PRGENV;PE_GA_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_GA_DEFAULT_GENCOMPILERS_GNU;PE_GA_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_GA_DEFAULT_GENCOMPS_GNU;PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/ga/5.3.0.6/@PRGENV@/@PE_GA_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_GA_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_GA_DEFAULT_VOLATILE_PRGENV;PE_HDF5_DEFAULT_FIXED_PRGENV=CRAY\ PGI ;export PE_HDF5_DEFAULT_FIXED_PRGENV;PE_HDF5_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_DEFAULT_GENCOMPILERS_INTEL=15.0\ 14.0 ;export PE_HDF5_DEFAULT_GENCOMPILERS_INTEL;PE_HDF5_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_DEFAULT_GENCOMPS_GNU;PE_HDF5_DEFAULT_GENCOMPS_INTEL=150\ 140 ;export PE_HDF5_DEFAULT_GENCOMPS_INTEL;PE_HDF5_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5/1.8.16/@PRGENV@/@PE_HDF5_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_DEFAULT_VOLATILE_PRGENV=GNU\ INTEL ;export PE_HDF5_DEFAULT_VOLATILE_PRGENV;PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI ;export PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_INTEL=15.0\ 14.0 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_INTEL;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_INTEL=150\ 140 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_INTEL;PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5-parallel/1.8.16/@PRGENV@/@PE_HDF5_PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU\ INTEL ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/mpich-intel/16.0/lib/pkgconfig:/opt/cray/parallel-netcdf/1.7.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf/4.4.0/INTEL/15.0/lib/pkgconfig:/opt/cray/mpt/7.3.3/gni/mpich-intel/15.0/lib/pkgconfig:/opt/cray/ga/5.3.0.6/INTEL/15.0/lib/pkgconfig ;export PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64=4.9 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64=49 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20=nv20 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35=nv35 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35;PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_@accelerator@ ;export PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci_acc/16.03.1/@PRGENV@/@PE_LIBSCI_ACC_DEFAULT_GENCOMPS@/@PE_LIBSCI_ACC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64;PE_LIBSCI_DEFAULT_OMP_REQUIRES= ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES;PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp;PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_DEFAULT_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.03.1/@PRGENV@/@PE_LIBSCI_DEFAULT_GENCOMPS@/@PE_LIBSCI_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_GENCOMPS_CRAY_x86_64;PE_LIBSCI_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_GENCOMPS_GNU_mic_knl;PE_LIBSCI_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_GENCOMPS_GNU_x86_64;PE_LIBSCI_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_GENCOMPS_INTEL_x86_64;PE_LIBSCI_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_GENCOMPS_PGI_x86_64;PE_LIBSCI_MODULE_NAME=cray-libsci/16.03.1 ;export PE_LIBSCI_MODULE_NAME;PE_LIBSCI_OMP_REQUIRES= ;export PE_LIBSCI_OMP_REQUIRES;PE_LIBSCI_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_OMP_REQUIRES_openmp;PE_LIBSCI_PKGCONFIG_LIBS=libsci_mpi:libsci ;export PE_LIBSCI_PKGCONFIG_LIBS;PE_LIBSCI_PKGCONFIG_VARIABLES=PE_LIBSCI_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_PKGCONFIG_VARIABLES;PE_LIBSCI_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_REQUIRED_PRODUCTS;PE_LIBSCI_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.03.1/@PRGENV@/@PE_LIBSCI_GENCOMPS@/@PE_LIBSCI_TARGET@/lib/pkgconfig ;export PE_LIBSCI_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_VOLATILE_PRGENV;PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_MPICH_CXX_PKGCONFIG_LIBS;PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64;PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64;PE_MPICH_DEFAULT_FIXED_PRGENV=INTEL ;export PE_MPICH_DEFAULT_FIXED_PRGENV;PE_MPICH_DEFAULT_GENCOMPILERS_CRAY=8.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_CRAY;PE_MPICH_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_MPICH_DEFAULT_GENCOMPILERS_GNU;PE_MPICH_DEFAULT_GENCOMPILERS_PGI=15.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_PGI;PE_MPICH_DEFAULT_GENCOMPS_CRAY=83 ;export PE_MPICH_DEFAULT_GENCOMPS_CRAY;PE_MPICH_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_MPICH_DEFAULT_GENCOMPS_GNU;PE_MPICH_DEFAULT_GENCOMPS_PGI=153 ;export PE_MPICH_DEFAULT_GENCOMPS_PGI;PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.3.3/gni/mpich-@PRGENV@@PE_MPICH_DEFAULT_DIR_DEFAULT64@/@PE_MPICH_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_MPICH_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ PGI ;export PE_MPICH_DEFAULT_VOLATILE_PRGENV;PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_MPICH_FORTRAN_PKGCONFIG_LIBS;PE_MPICH_MODULE_NAME=cray-mpich ;export PE_MPICH_MODULE_NAME;PE_MPICH_MULTITHREADED_LIBS_multithreaded=_mt ;export PE_MPICH_MULTITHREADED_LIBS_multithreaded;PE_MPICH_NV_LIBS= ;export PE_MPICH_NV_LIBS;PE_MPICH_NV_LIBS_nvidia20=-lcudart ;export PE_MPICH_NV_LIBS_nvidia20;PE_MPICH_NV_LIBS_nvidia35=-lcudart ;export PE_MPICH_NV_LIBS_nvidia35;PE_MPICH_PKGCONFIG_LIBS=mpich ;export PE_MPICH_PKGCONFIG_LIBS;PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_MULTITHREADED_LIBS_@multithreaded@ ;export PE_MPICH_PKGCONFIG_VARIABLES;PE_MPICH_TARGET_VAR_nvidia20=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia20;PE_MPICH_TARGET_VAR_nvidia35=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia35;PE_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_DEFAULT_FIXED_PRGENV;PE_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_DEFAULT_GENCOMPS_GNU;PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5 ;export PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf/4.4.0/@PRGENV@/@PE_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5_PARALLEL:PE_MPICH ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf-hdf5parallel/4.4.0/@PRGENV@/@PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_PAPI_DEFAULT_ACCEL_LIBS= ;export PE_PAPI_DEFAULT_ACCEL_LIBS;PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35;PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES=PE_PAPI_ACCEL_LIBS_@accelerator@ ;export PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES;PE_PAPI_DEFAULT_TARGET_VAR_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_TARGET_VAR_nvidia35;PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/@PRGENV@/@PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64;PE_PETSC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI:PE_HDF5_PARALLEL:PE_TPSL ;export PE_PETSC_DEFAULT_REQUIRED_PRODUCTS;PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/petsc/3.6.3.0/complex/@PRGENV@/@PE_PETSC_DEFAULT_GENCOMPS@/@PE_PETSC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PETSC_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_PETSC_DEFAULT_VOLATILE_PRGENV;PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf/4.4.0/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.8.16/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5/1.8.16/PGI/15.3/lib/pkgconfig:/opt/cray/ga/5.3.0.6/PGI/15.3/lib/pkgconfig ;export PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH;PE_PKGCONFIG_DEFAULT_PRODUCTS=PE_TRILINOS:PE_TPSL_64:PE_TPSL:PE_PETSC:PE_PARALLEL_NETCDF:PE_NETCDF_HDF5PARALLEL:PE_NETCDF:PE_MPICH:PE_LIBSCI_ACC:PE_LIBSCI:PE_HDF5_PARALLEL:PE_HDF5:PE_GA:PE_FFTW:PE_ACML ;export PE_PKGCONFIG_DEFAULT_PRODUCTS;PE_PKGCONFIG_LIBS=AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;PE_PKGCONFIG_PRODUCTS_DEFAULT=PE_PAPI ;export PE_PKGCONFIG_PRODUCTS_DEFAULT;PE_PKG_CONFIG_PATH=/opt/cray/cti/1.0.4/lib/pkgconfig ;export PE_PKG_CONFIG_PATH;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS ;export PE_PRODUCT_LIST;PE_SMA_DEFAULT_COMPFLAG= ;export PE_SMA_DEFAULT_COMPFLAG;PE_SMA_DEFAULT_COMPFLAG_GNU=-fcray-pointer ;export PE_SMA_DEFAULT_COMPFLAG_GNU;PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64;PE_SMA_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_PGI_DEFAULT64;PE_SMA_DEFAULT_PKGCONFIG_VARIABLES=PE_SMA_COMPFLAG_@prgenv@ ;export PE_SMA_DEFAULT_PKGCONFIG_VARIABLES;PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.3.3/gni/sma@PE_SMA_DEFAULT_DIR_DEFAULT64@/lib64/pkgconfig ;export PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.03.1/@PRGENV@64/@PE_TPSL_64_DEFAULT_GENCOMPS@/@PE_TPSL_64_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_64_DEFAULT_VOLATILE_PRGENV;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.03.1/@PRGENV@/@PE_TPSL_DEFAULT_GENCOMPS@/@PE_TPSL_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_DEFAULT_VOLATILE_PRGENV;PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.4 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TRILINOS_DEFAULT_GENCOMPILERmodule swap gcc gcc/4.9.3 module load boost module load cmake/3.1.3 module load fftw export CRAYPE_LINK_TYPE=dynamic export CRAY_ADD_RPATH=yes # install openbabel library cd $INSTDIR bash: line 26: cd: /var/lib/jenkins/rmg-spp: No such file or directory wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz --2017-02-15 14:18:23-- http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz Resolving downloads.sourceforge.net... 216.34.181.59 Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected. HTTP request sent, awaiting response... 302 Found Location: https://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz [following] --2017-02-15 14:18:23-- https://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz Resolving superb-sea2.dl.sourceforge.net... 209.160.57.180 Connecting to superb-sea2.dl.sourceforge.net|209.160.57.180|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 20509105 (20M) [application/x-gzip] Saving to: `openbabel-2.3.2.tar.gz.4' 0K .......... .......... .......... .......... .......... 0% 117K 2m50s 50K .......... .......... .......... .......... .....S_INTEL_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64=84 ;export PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TRILINOS_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_HDF5_PARALLEL:PE_NETCDF_HDF5PARALLEL:PE_LIBSCI:PE_TPSL ;export PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS;PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/trilinos/12.2.1.0/@PRGENV@/@PE_TRILINOS_DEFAULT_GENCOMPS@/@PE_TRILINOS_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TRILINOS_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL ;export PE_TRILINOS_DEFAULT_VOLATILE_PRGENV;PKGCONFIG_ENABLED=1 ;export PKGCONFIG_ENABLED;PKG_CONFIG_PATH=/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/pkgconfig:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/pkgconfig:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64/pkgconfig:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64/pkgconfig:/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/lib64/pkgconfig:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64/pkgconfig:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64/pkgconfig:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64/pkgconfig:/opt/cray/craype/2.5.4/pkg-config:/opt/cray/iobuf/2.0.6/lib/pkgconfig:/opt/cray/atp/2.0.1/lib/pkgconfig ;export PKG_CONFIG_PATH;PKG_CONFIG_PATH_DEFAULT=/opt/cray/papi/5.4.3.1/lib64/pkgconfig ;export PKG_CONFIG_PATH_DEFAULT;SHMEM_ABORT_ON_ERROR=1 ;export SHMEM_ABORT_ON_ERROR;XTOS_VERSION=5.2.82 ;export XTOS_VERSION;XTPE_NETWORK_TARGET=gemini ;export XTPE_NETWORK_TARGET;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;unset ASSEMBLER_X86_64;unset CC_X86_64;unset CRAYLIBS_X86_64;unset CRAYLMD_LICENSE_FILE;unset CRAY_BINUTILS_BIN;unset CRAY_BINUTILS_ROOT;unset CRAY_BINUTILS_VERSION;unset CRAY_CC_VERSION;unset CRAY_CXX_IPA_LIBS;unset CRAY_FTN_VERSION;unset CRAY_PE_TARGET;unset CRAY_PRGENVCRAY;unset FORTRAN_SYSTEM_MODULE_NAMES;unset FTN_X86_64;unset GCC_X86_64;unset INCLUDE_PATH_X86_64;unset LINKER_X86_64;unset NLSPATH;unset PE_LEVEL; ${MODULESHOME}/bin/modulecmd bash $* GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-mpich/7.5.0:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.4/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.4/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* BOOST_ROOT=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2 ;export BOOST_ROOT;CRAY_BOOST_DIR=/sw/xe/boost/1.53.0 ;export CRAY_BOOST_DIR;CRAY_BOOST_INCLUDE_OPTS=-I/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/include ;export CRAY_BOOST_INCLUDE_OPTS;CRAY_BOOST_POST_LINK_OPTS=-L/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib ;export CRAY_BOOST_POST_LINK_OPTS;CRAY_BOOST_VERSION=1.53.0 ;export CRAY_BOOST_VERSION;LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-mpich/7.5.0:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0 ;export LOADEDMODULES;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS:CRAY_BOOST ;export PE_PRODUCT_LIST;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-mpich/7.5.0:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3 ;export LOADEDMODULES;PATH=/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.4/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* CRAY_FFTW_VERSION=3.3.4.7 ;export CRAY_FFTW_VERSION;CRAY_LD_LIBRARY_PATH=/opt/cray/fftw/3.3.4.7/interlagos/lib:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;FFTW_DIR=/opt/cray/fftw/3.3.4.7/interlagos/lib ;export FFTW_DIR;FFTW_INC=/opt/cray/fftw/3.3.4.7/interlagos/include ;export FFTW_INC;FFTW_VERSION=3.3.4.7 ;export FFTW_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-mpich/7.5.0:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3:fftw/3.3.4.7 ;export LOADEDMODULES;MANPATH=/opt/cray/fftw/3.3.4.7/share/man:/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.4/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/fftw/3.3.4.7/interlagos/bin:/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.4/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_FFTW_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_REQUIRED_PRODUCTS;PE_FFTW_TARGET_broadwell=broadwell ;export PE_FFTW_TARGET_broadwell;PE_FFTW_TARGET_haswell=haswell ;export PE_FFTW_TARGET_haswell;PE_FFTW_TARGET_interlagos=interlagos ;export PE_FFTW_TARGET_interlagos;PE_FFTW_TARGET_mic_knl=mic_knl ;export PE_FFTW_TARGET_mic_knl;PE_FFTW_TARGET_sandybridge=sandybridge ;export PE_FFTW_TARGET_sandybridge;PE_FFTW_TARGET_x86_64=x86_64 ;export PE_FFTW_TARGET_x86_64;PE_FFTW_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.7/@PE_FFTW_TARGET@/lib/pkgconfig ;export PE_FFTW_VOLATILE_PKGCONFIG_PATH;PE_PKGCONFIG_LIBS=fftw3f_mpi:fftw3f_threads:fftw3f:fftw3_mpi:fftw3_threads:fftw3:AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_FFTW:PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3:/opt/cray/modulefiles/fftw/3.3.4.7 ;export _LMFILES_; ..... 0% 422K 1m49s 100K .......... .......... .......... .......... .......... 0% 1.04M 78s 150K .......... .......... .......... .......... .......... 0% 1.09M 63s 200K .......... .......... .......... .......... .......... 1% 1.11M 54s 250K .......... .......... .......... .......... .......... 1% 6.33M 45s 300K .......... .......... .......... .......... .......... 1% 1.16M 41s 350K .......... .......... .......... .......... .......... 1% 1.06M 38s 400K .......... .......... .......... .......... .......... 2% 58.3M 34s 450K .......... .......... .......... .......... .......... 2% 2.75M 31s 500K .......... .......... .......... .......... .......... 2% 1.68M 29s 550K .......... .......... .......... .......... .......... 2% 18.9M 27s 600K .......... .......... .......... .......... .......... 3% 1.19M 26s 650K .......... .......... .......... .......... .......... 3% 31.8M 24s 700K .......... .......... .......... .......... .......... 3% 49.9M 22s 750K 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openbabel-2.3.2/doc/API/html/search/all_7e.html openbabel-2.3.2/doc/API/html/search/classes_5f.html openbabel-2.3.2/doc/API/html/search/classes_61.html openbabel-2.3.2/doc/API/html/search/classes_62.html openbabel-2.3.2/doc/API/html/search/classes_63.html openbabel-2.3.2/doc/API/html/search/classes_64.html openbabel-2.3.2/doc/API/html/search/classes_65.html openbabel-2.3.2/doc/API/html/search/classes_66.html openbabel-2.3.2/doc/API/html/search/classes_67.html openbabel-2.3.2/doc/API/html/search/classes_69.html openbabel-2.3.2/doc/API/html/search/classes_6c.html openbabel-2.3.2/doc/API/html/search/classes_6d.html openbabel-2.3.2/doc/API/html/search/classes_6f.html openbabel-2.3.2/doc/API/html/search/classes_70.html openbabel-2.3.2/doc/API/html/search/classes_71.html openbabel-2.3.2/doc/API/html/search/classes_72.html openbabel-2.3.2/doc/API/html/search/classes_73.html cd openbabel-2.3.2/ mkdir build mkdir: cannot create directory `build': File exists cd build/ cmake 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openbabel-2.3.2/doc/API/html/search/typedefs_6b.html openbabel-2.3.2/doc/API/html/search/typedefs_6c.html openbabel-2.3.2/doc/API/html/search/typedefs_6d.html openbabel-2.3.2/doc/API/html/search/typedefs_6e.html openbabel-2.3.2/doc/API/html/search/typedefs_6f.html openbabel-2.3.2/doc/API/html/search/typedefs_70.html openbabel-2.3.2/doc/API/html/search/typedefs_72.html openbabel-2.3.2/doc/API/html/search/typedefs_73.html openbabel-2.3.2/doc/API/html/search/typedefs_74.html openbabel-2.3.2/doc/API/html/search/typedefs_76.html openbabel-2.3.2/doc/API/html/search/typedefs_77.html openbabel-2.3.2/doc/API/html/search/variables_5f.html openbabel-2.3.2/doc/API/html/search/variables_61.html openbabel-2.3.2/doc/API/html/search/variables_62.html openbabel-2.3.2/doc/API/html/search/variables_63.html openbabel-2.3.2/doc/API/html/search/variables_64.html openbabel-2.3.2/doc/API/html/search/variables_65.html openbabel-2.3.2/doc/API/html/search/variables_66.html openbabel-2.3.2/doc/API/html/search/variables_67.html openbabel-2.3.2/doc/API/html/search/variables_68.html openbabel-2.3.2/doc/API/html/search/variables_69.html openbabel-2.3.2/doc/API/html/search/variables_6c.html openbabel-2.3.2/doc/API/html/search/variables_6d.html openbabel-2.3.2/doc/API/html/search/variables_6e.html openbabel-2.3.2/doc/API/html/search/variables_6f.html openbabel-2.3.2/doc/API/html/search/variables_70.html openbabel-2.3.2/doc/API/html/search/variables_71.html openbabel-2.3.2/doc/API/html/search/variables_72.html openbabel-2.3.2/doc/API/html/search/variables_73.html openbabel-2.3.2/doc/API/html/search/variables_74.html openbabel-2.3.2/doc/API/html/search/variables_76.html openbabel-2.3.2/doc/API/html/search/variables_77.html openbabel-2.3.2/doc/API/html/search/variables_78.html openbabel-2.3.2/doc/API/html/search/variables_79.html openbabel-2.3.2/doc/API/html/search/variables_7a.html openbabel-2.3.2/data/aromatic.h openbabel-2.3.2/data/aromatic.txt openbabel-2.3.2/data/atomtyp.h openbabel-2.3.2/data/atomtyp.txt openbabel-2.3.2/data/babel_povray3.inc openbabel-2.3.2/data/bin2hex.pl openbabel-2.3.2/data/bondtyp.h openbabel-2.3.2/data/bondtyp.txt openbabel-2.3.2/data/CMakeLists.txt openbabel-2.3.2/data/element.h openbabel-2.3.2/data/element.txt openbabel-2.3.2/data/fragments.txt openbabel-2.3.2/data/gaff.dat openbabel-2.3.2/data/gaff.prm openbabel-2.3.2/data/genheaders.sh openbabel-2.3.2/data/ghemical.prm openbabel-2.3.2/data/isotope-small.txt openbabel-2.3.2/data/isotope.h openbabel-2.3.2/data/isotope.txt openbabel-2.3.2/data/logp.txt openbabel-2.3.2/data/MACCS.txt openbabel-2.3.2/data/mm2.prm openbabel-2.3.2/data/mmff94.ff openbabel-2.3.2/data/mmff94s.ff openbabel-2.3.2/data/mmffang.par openbabel-2.3.2/data/mmffbndk.par openbabel-2.3.2/data/mmffbond.par openbabel-2.3.2/data/mmffchg.par openbabel-2.3.2/data/mmffdef.par openbabel-2.3.2/data/mmffdfsb.par openbabel-2.3.2/data/mmffoop.par openbabel-2.3.2/data/mmffpbci.par openbabel-2.3.2/data/mmffprop.par openbabel-2.3.2/data/mmffs_oop.par openbabel-2.3.2/data/mmffs_tor.par openbabel-2.3.2/data/mmffstbn.par openbabel-2.3.2/data/mmfftor.par openbabel-2.3.2/data/mmffvdw.par openbabel-2.3.2/data/mpC.txt openbabel-2.3.2/data/mr.txt openbabel-2.3.2/data/patterns.txt openbabel-2.3.2/data/phmodel.txt openbabel-2.3.2/data/phmodeldata.h openbabel-2.3.2/data/plugindefines.txt openbabel-2.3.2/data/psa.txt openbabel-2.3.2/data/qeq.txt openbabel-2.3.2/data/resdata.h openbabel-2.3.2/data/resdata.txt openbabel-2.3.2/data/ringtyp.txt openbabel-2.3.2/data/SMARTS_InteLigand.txt openbabel-2.3.2/data/space-groups.txt openbabel-2.3.2/data/space-groups.xsl openbabel-2.3.2/data/splash.png openbabel-2.3.2/data/superatom.txt openbabel-2.3.2/data/svgformat.script openbabel-2.3.2/data/templates.sdf openbabel-2.3.2/data/torlib.h openbabel-2.3.2/data/torlib.txt openbabel-2.3.2/data/types.h openbabel-2.3.2/data/types.txt openbabel-2.3.2/data/UFF.prm openbabel-2.3.2/cmake/modules/ openbabel-2.3.2/cmake/modules/FindCairo.cmake openbabel-2.3.2/cmake/modules/FindEigen2.cmake openbabel-2.3.2/cmake/modules/FindEigen3.cmake openbabel-2.3.2/cmake/modules/FindInchi.cmake openbabel-2.3.2/cmake/modules/MacroEnsureVersion.cmake openbabel-2.3.2/cmake/modules/UsePythonTest.cmake -- Using included inchi library. -- Could NOT find wxWidgets (missing: wxWidgets_FOUND) -- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0") -- Could NOT find Eigen2 (missing: EIGEN2_INCLUDE_DIR EIGEN2_VERSION_OK) (Required is at least version "2.0.0") -- Cairo found. PNG output will be supported. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /mnt/a/u/system/bwjenkins/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /mnt/a/u/system/bwjenkins/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /mnt/a/u/system/bwjenkins/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /mnt/a/u/system/bwjenkins/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. -- Attempting to build the GUI -- wxWidgets not found => GUI will not be built CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testbabel.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testbabel.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testsym.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testsym.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testfastsearch.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testfastsearch.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testunique.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testunique.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testkekule.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /mnt/a/u/system/bwjenkins/openbabel-2.3.2/data) MESSAGE("/mnt/a/u/system/bwjenkins/openbabel-2.3.2/scripts/python:/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /mnt/a/u/system/bwjenkins/openbabel-2.3.2/test/testkekule.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done nice make -j8 -- Generating done -- Build files have been written to: /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build [ 19%] Built target inchi [ 33%] Built target openbabel [ 35%] [ 35%] Built target plugin_descriptors [ 35%] Built target CSRformat Built target APIInterface [ 35%] [ 37%] Built target MCDLformat [ 39%] Built target plugin_charges Built target plugin_forcefields [ 41%] Built target plugin_fingerprints [ 43%] [ 43%] Built target PQSformat Built target abinitformat [ 45%] Built target acesformat [ 45%] [ 45%] Built target MNAformat Built target acrformat [ 46%] [ 46%] [ 46%] [ 47%] Built target asciiformat Built target adfformat Built target amberformat Built target alchemyformat [ 47%] Built target balstformat [ 47%] [ 48%] Built target boxformat [ 49%] Built target bgfformat Built target plugin_ops [ 49%] [ 50%] [ 50%] [ 50%] Built target castepformat Built target cacheformat Built target carformat Built target cacaoformat [ 50%] Built target cccformat [ 50%] Built target chem3dformat [ 52%] Built target cdxmlformat [ 52%] [ 52%] Built target cifformat Built target chemdrawct [ 52%] Built target chemkinformat [ 53%] Built target chemtoolformat [ 53%] Built target cmlreactformat [ 55%] [ 55%] Built target copyformat [ 55%] Built target chemdrawcdx [ 56%] Built target crkformat [ 56%] Built target cssrformat [ 56%] [ 56%] Built target cmlformat Built target crystal09format Built target dlpolyformat [ 57%] [ 57%] [ 57%] [ 57%] Built target fastaformat Built target dmolformat [ 58%] Built target featformat Built target fchkformat [ 58%] Built target fhformat [ 58%] Built target fingerprintformat Built target fhiaimsformat [ 58%] Built target fastsearchformat [ 59%] Built target fpsformat [ 59%] [ 60%] [ 60%] Built target gamessformat [ 61%] [ 61%] Built target gausscubeformat Built target freefracformat [ 61%] Built target gaussformat Built target gausszmatformat Built target gamessukformat [ 61%] Built target ghemicalformat [ 61%] Built target groformat [ 62%] [ 62%] Built target gromos96format Built target gulpformat [ 62%] Built target jaguarformat [ 62%] [ 63%] Built target hinformat Built target lmpdatformat [ 63%] Built target mdlformat [ 63%] Built target mmcifformat [ 64%] Built target inchiformat [ 64%] Built target mmodformat [ 65%] [ 65%] [ 65%] [ 66%] Built target mopacformat Built target molproformat Built target moldenformat Built target molreport [ 66%] Built target mol2format [ 67%] Built target mpqcformat [ 68%] [ 68%] Built target mpdformat Built target msiformat [ 68%] [ 68%] Built target nwchemformat Built target msmsformat [ 68%] [ 68%] Built target nulformat Built target opendxformat [ 69%] [ 69%] Built target outformat Built target pcmodelformat [ 69%] [ 69%] Built target pdbqtformat Built target pdbformat [ 70%] [ 70%] Built target posformat Built target pngformat [ 71%] Built target povrayformat [ 71%] [ 71%] Built target pubchem [ 71%] [ 71%] Built target pqrformat Built target png2format Built target qchemformat [ 72%] [ 72%] Built target reportformat [ 72%] Built target rsmiformat [ 72%] Built target pwscfformat Built target rxnformat [ 72%] Built target smilesformat [ 73%] Built target shelxformat [ 73%] Built target svgformat [ 74%] [ 74%] [ 74%] [ 74%] Built target tinkerformat Built target textformat Built target thermoformat Built target turbomoleformat [ 75%] Built target titleformat [ 75%] Built target unichemformat [ 76%] Built target vaspformat [ 76%] Built target viewmolformat [ 76%] [ 77%] Built target xsfformat Built target xtcformat [ 77%] [ 77%] Built target xedformat [ 78%] Built target xyzformat Built target xmlformat [ 78%] Built target yasaraformat [ 78%] Built target babel [ 79%] [ 79%] Built target obabel Built target zindoformat [ 79%] [ 79%] [ 79%] Built target obchiral Built target obfit Built target obenergy [ 81%] [ 81%] Built target obconformer Built target obgen [ 81%] Built target obgrep [ 82%] [ 82%] Built target obprop Built target obminimize [ 83%] Built target obspectrophore [ 83%] Built target obprobe [ 85%] Built target obrotate [ 85%] [ 85%] Built target test_atom Built target test_aromatest [ 85%] [ 85%] Built target obrotamer Built target test_automorphism [ 86%] [ 86%] Built target test_builder Built target test_canonconsistent [ 87%] [ 87%] Built target test_cansmi Built target roundtrip [ 87%] [ 87%] Built target test_charge-mmff94 Built target test_charge-gasteiger [ 87%] [ 87%] Built target test_bond [ 87%] Built target test_conversion Built target test_canonstable [ 88%] [ 88%] Built target test_cistrans Built target test_datatest [ 89%] [ 89%] Built target test_ffghemical Built target test_ffmmff94 [ 89%] [ 89%] Built target test_format Built target test_ffgaff [ 90%] Built target test_formalcharge [ 90%] Built target test_graphsym make install [ 90%] Built target test_ffuff [ 92%] [ 92%] [ 92%] Built target test_implicitH Built target test_inchiwrite Built target test_formula [ 92%] [ 92%] [ 93%] [ 93%] Built target test_isomorphism Built target test_invalidsmiles Built target test_invalidsmarts Built target test_internalcoord [ 93%] [ 93%] Built target test_iterators [ 93%] Built target test_math Built target test_lssr [ 95%] [ 96%] Built target test_phmodel Built target test_ringtest [ 96%] Built target test_residue [ 96%] [ 96%] Built target test_rotor [ 97%] [ 97%] Built target test_shuffle Built target test_mol Built target test_smartsparse [ 97%] Built target test_smiles [ 97%] Built target test_smartstest [ 98%] [ 98%] [ 98%] Built target test_stereo Built target test_stereoperception [ 98%] Built target test_tetrahedral Built target test_squareplanar [ 99%] Built target test_tetranonplanar [ 99%] [ 99%] [100%] Built target test_uniqueid Built target test_smilesmatch Built target test_tetraplanar [100%] Built target test_unitcell [100%] Built target test_logp_psa [100%] Built target test_spectrophore [ 20%] Built target openbabel [ 22%] Built target plugin_charges [ 24%] Built target plugin_descriptors [ 24%] Built target plugin_fingerprints [ 26%] Built target plugin_forcefields [ 31%] Built target plugin_ops [ 44%] Built target inchi [ 44%] Built target APIInterface [ 44%] Built target CSRformat [ 44%] Built target MCDLformat [ 45%] Built target MNAformat [ 45%] Built target PQSformat [ 45%] Built target abinitformat [ 46%] Built target acesformat [ 46%] Built target acrformat [ 46%] Built target adfformat [ 47%] Built target alchemyformat [ 47%] Built target amberformat [ 48%] Built target asciiformat [ 48%] Built target balstformat [ 49%] Built target bgfformat [ 49%] Built target boxformat [ 49%] Built target cacaoformat [ 50%] Built target cacheformat [ 50%] Built target carformat [ 50%] Built target castepformat [ 50%] Built target cccformat [ 51%] Built target cdxmlformat [ 51%] Built target chem3dformat [ 52%] Built target chemdrawcdx [ 52%] Built target chemdrawct [ 52%] Built target chemkinformat [ 53%] Built target chemtoolformat [ 53%] Built target cifformat [ 54%] Built target cmlformat [ 54%] Built target cmlreactformat [ 55%] Built target copyformat [ 55%] Built target crkformat [ 55%] Built target crystal09format [ 56%] Built target cssrformat [ 56%] Built target dlpolyformat [ 56%] Built target dmolformat [ 56%] Built target fastaformat [ 57%] Built target fastsearchformat [ 57%] Built target fchkformat [ 57%] Built target featformat [ 58%] Built target fhformat [ 58%] Built target fhiaimsformat [ 58%] Built target fingerprintformat [ 59%] Built target fpsformat [ 59%] Built target freefracformat [ 59%] Built target gamessformat [ 60%] Built target gamessukformat [ 60%] Built target gausscubeformat [ 60%] Built target gaussformat [ 61%] Built target gausszmatformat [ 61%] Built target ghemicalformat [ 61%] Built target groformat [ 62%] Built target gromos96format [ 62%] Built target gulpformat [ 62%] Built target hinformat [ 63%] Built target inchiformat [ 63%] Built target jaguarformat [ 63%] Built target lmpdatformat [ 64%] Built target mdlformat [ 64%] Built target mmcifformat [ 64%] Built target mmodformat [ 65%] Built target mol2format [ 65%] Built target moldenformat [ 65%] Built target molproformat [ 66%] Built target molreport [ 66%] Built target mopacformat [ 66%] Built target mpdformat [ 67%] Built target mpqcformat [ 67%] Built target msiformat [ 67%] Built target msmsformat [ 68%] Built target nulformat [ 68%] Built target nwchemformat [ 68%] Built target opendxformat [ 69%] Built target outformat [ 69%] Built target pcmodelformat [ 69%] Built target pdbformat [ 69%] Built target pdbqtformat [ 70%] Built target png2format [ 70%] Built target pngformat [ 70%] Built target posformat [ 71%] Built target povrayformat [ 71%] Built target pqrformat [ 71%] Built target pubchem [ 72%] Built target pwscfformat [ 72%] Built target qchemformat [ 72%] Built target reportformat [ 72%] Built target rsmiformat [ 72%] Built target rxnformat [ 73%] Built target shelxformat [ 73%] Built target smilesformat [ 73%] Built target svgformat [ 74%] Built target textformat [ 74%] Built target thermoformat [ 74%] Built target tinkerformat [ 75%] Built target titleformat [ 75%] Built target turbomoleformat [ 75%] Built target unichemformat [ 76%] Built target vaspformat [ 76%] Built target viewmolformat [ 76%] Built target xedformat [ 77%] Built target xmlformat [ 77%] Built target xsfformat [ 78%] Built target xtcformat [ 78%] Built target xyzformat [ 78%] Built target yasaraformat [ 79%] Built target zindoformat [ 79%] Built target babel [ 79%] Built target obabel [ 79%] Built target obchiral [ 80%] Built target obconformer [ 80%] Built target obenergy [ 80%] Built target obfit [ 81%] Built target obgen [ 81%] Built target obgrep [ 81%] Built target obminimize [ 82%] Built target obprobe [ 82%] Built target obprop [ 82%] Built target obrotamer [ 83%] Built target obrotate [ 83%] Built target obspectrophore [ 84%] Built target roundtrip [ 85%] Built target test_aromatest [ 85%] Built target test_atom [ 85%] Built target test_automorphism [ 86%] Built target test_bond [ 86%] Built target test_builder [ 86%] Built target test_canonconsistent [ 87%] Built target test_canonstable [ 87%] Built target test_cansmi [ 87%] Built target test_charge-gasteiger [ 87%] Built target test_charge-mmff94 [ 88%] Built target test_cistrans [ 88%] Built target test_conversion [ 88%] Built target test_datatest [ 89%] Built target test_ffgaff [ 89%] Built target test_ffghemical [ 89%] Built target test_ffmmff94 [ 90%] Built target test_ffuff [ 90%] Built target test_formalcharge [ 90%] Built target test_format [ 91%] Built target test_formula [ 91%] Built target test_graphsym [ 91%] Built target test_implicitH [ 92%] Built target test_inchiwrite [ 92%] Built target test_internalcoord [ 93%] Built target test_invalidsmarts [ 93%] Built target test_invalidsmiles [ 93%] Built target test_isomorphism [ 93%] Built target test_iterators [ 94%] Built target test_logp_psa [ 94%] Built target test_lssr [ 94%] Built target test_math [ 95%] Built target test_mol [ 95%] Built target test_phmodel [ 95%] Built target test_residue [ 96%] Built target test_ringtest [ 96%] Built target test_rotor [ 96%] Built target test_shuffle [ 97%] Built target test_smartsparse [ 97%] Built target test_smartstest [ 97%] Built target test_smiles [ 98%] Built target test_smilesmatch [ 98%] Built target test_spectrophore [ 98%] Built target test_squareplanar [ 99%] Built target test_stereo [ 99%] Built target test_stereoperception [ 99%] Built target test_tetrahedral [ 99%] Built target test_tetranonplanar CMake Error at cmake_install.cmake:36 (file): file cannot create directory: /var/lib/jenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel. Maybe need administrative privileges. make: *** [install] Error 1 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib export CC=cc export CXX=CC export FC=ftn # install plplot library cd $INSTDIR bash: line 43: cd: /var/lib/jenkins/rmg-spp: No such file or directory git clone git://git.code.sf.net/p/plplot/plplot plplot.git fatal: destination path 'plplot.git' already exists and is not an empty directory. cd plplot.git/ mkdir build mkdir: cannot create directory `build': File exists cd build cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install .. [100%] Built target test_tetraplanar [100%] Built target test_uniqueid [100%] Built target test_unitcell Install the project... -- Install configuration: "RelWithDebInfo" -- CMake version = 3.1.3 -- CMAKE_SYSTEM_NAME = Linux -- SH_EXECUTABLE = /bin/bash -- Checking whether system has ANSI C header files -- ANSI C header files - found -- SWIG_VERSION = 3.0.7 -- WARNING: Perl module XML::DOM not found -- Looking for pkg-config - found -- cxx_compiler_library_pathname_list = /opt/cray/atp/2.0.1/libApp/libAtpSigHandler.so;/opt/cray/atp/2.0.1/libApp/libAtpSigHCommData.a;/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/librca.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libfmpich.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpichcxx.so;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-mpi-io.a;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-posix.a;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-stubs.a;/usr/lib64/libz.so;/usr/lib64/librt.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpich_gnu_49.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpichcxx_gnu_49.so;/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib/libsci_gnu_49_mpi.so;/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib/libsci_gnu_49.so;/opt/gcc/4.9.3/snos/lib64/libgfortran.so;/opt/gcc/4.9.3/snos/lib64/libquadmath.so;/usr/lib64/libm.so;/usr/lib64/libpthread.so;/opt/gcc/4.9.3/snos/lib64/libstdc++.so;/usr/lib64/libm.so;/usr/lib64/libc.so -- X11_FOUND = 1 -- X11_INCLUDE_DIR = /usr/include -- X11_COMPILE_FLAGS = -I/usr/include -- X11_LIBRARIES = /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so -- NOTICE: Found: /opt/cray/craype/2.5.4/bin/ftn -- PYTHON_VERSION = 2.6.9 -- Building Python binding with plsmem() support -- Start determining consistent system data for Tcl and friends -- Looking for Tcl - found -- TCL_INCLUDE_PATH = /usr/include -- TCL_LIBRARY = /usr/lib64/libtcl8.5.so -- TCL_STUB_LIBRARY = /usr/lib64/libtclstub8.5.a -- TCL_LIBRARY_PATH = /usr/lib64 -- Looking for tclsh - found -- TCL_TCLSH = /usr/bin/tclsh -- PLPLOT_TCL_VERSION = 8.5.5 -- WARNING: Because Tk is disabled must disable Itk as well -- Finished determining consistent system data for Tcl and friends -- checking for module 'pango' -- found pango, version 1.26.2 -- checking for module 'pangoft2' -- found pangoft2, version 1.26.2 -- Found LTDL: /usr/lib64/libltdl.so -- LTDL_INCLUDE_DIR = /usr/include -- LTDL_LIBRARY_DIR = /usr/lib64 -- LTDL_LIBRARIES = /usr/lib64/libltdl.so -- checking for module 'pangocairo' -- found pangocairo, version 1.26.2 pc_libplplot_LINK_FLAGS = /usr/lib64/libltdl.so;/usr/lib64/libm.so;-lcsirocsa;-lqsastime -- WARNING: ENABLE_wxwidgets is OFF so setting all wxwidgets devices to OFF. -- WARNING: ENABLE_ocaml is OFF so disabling Plcairo module and lablgtk2 support -- WARNING: validate target will not be available to check for syntax issues in the PLplot DocBook documentation because onsgmls (or env) was not found. -- WARNING: Perl modules XML::Parser and/or XML::DOM not available so cannot check that swig_documentation.i is up to date. -- ENABLE_itcl: OFF -- Itcl libraries: plplot;/usr/lib64/libtcl8.5.so -- TEST_ENVIRONMENT = EXAMPLES_DIR=/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/examples SRC_EXAMPLES_DIR=/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/examples OUTPUT_DIR=/mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/ctest_examples_output_dir VC_CTEST_DIRECTORY= -- Determine compile and link flags for extXdrawable_demo -- checking for module 'gtk+-x11-2.0' -- found gtk+-x11-2.0, version 2.18.9 -- Determine compile and link flags for ext-cairo-test -- checking for module 'cairo' -- found cairo, version 1.8.8 Summary of CMake build system results for PLplot Install location variables which can be set by the user: CMAKE_INSTALL_PREFIX: /var/lib/jenkins/rmg-spp/plplot.git/install CMAKE_INSTALL_EXEC_PREFIX /var/lib/jenkins/rmg-spp/plplot.git/install CMAKE_INSTALL_BINDIR /var/lib/jenkins/rmg-spp/plplot.git/install/bin CMAKE_INSTALL_DATADIR /var/lib/jenkins/rmg-spp/plplot.git/install/share CMAKE_INSTALL_LIBDIR /var/lib/jenkins/rmg-spp/plplot.git/install/lib CMAKE_INSTALL_INCLUDEDIR /var/lib/jenkins/rmg-spp/plplot.git/install/include CMAKE_INSTALL_INFODIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/info CMAKE_INSTALL_MANDIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/man Derived install location variables: DATA_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/plplot5.12.0 LIB_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/lib INCLUDE_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/include/plplot BIN_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/bin TCL_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/tcl ADA_INCLUDE_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/ada/adainclude/plplotada ADA_LIB_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/lib/ada/adalib/plplotada PYTHON_INSTDIR /var/lib/jenkins/rmg-spp/plplot.git/install/lib64/python2.6/site-packages DRV_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/lib/plplot5.12.0/drivers DOC_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/doc/plplot MAN_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/man INFO_DIR /var/lib/jenkins/rmg-spp/plplot.git/install/share/info Other important CMake variables: CMAKE_SYSTEM_NAME: Linux UNIX: 1 WIN32: APPLE: MSVC: (MSVC_VERSION: ) MINGW: MSYS: CYGWIN: BORLAND: WATCOM: SWIG_FOUND: 1 PERL_FOUND: TRUE X11_FOUND: 1 CMAKE_BUILD_TYPE: CMAKE_C_COMPILER CMAKE_C_FLAGS: /opt/cray/craype/2.5.4/bin/cc CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS: /opt/cray/craype/2.5.4/bin/CC CMAKE_Fortran_COMPILER CMAKE_Fortran_FLAGS: /opt/cray/craype/2.5.4/bin/ftn Target Fortran: PYTHON_EXECUTABLE: /usr/bin/python PYTHON_INCLUDE_PATH: /usr/include/python2.6 PYTHON_LIBRARIES: /usr/lib64/libpython2.6.so NUMPY_INCLUDE_PATH: /usr/lib64/python2.6/site-packages/numpy/core/include/numpy ENABLE_DYNDRIVERS: ON DRIVERS_LIST: cairo;mem;null;ps;svg;xfig;xwin DEVICES_LIST: memcairo;extcairo;pdfcairo;pngcairo;pscairo;epscairo;svgcairo;xcairo;mem;null;ps;svg;xfig;xwin Library options: BUILD_SHARED_LIBS: ON PL_DOUBLE: ON Optional libraries: PL_HAVE_QHULL: OFF WITH_CSA: ON PL_HAVE_FREETYPE: PL_HAVE_PTHREAD: ON HAVE_AGG: HAVE_SHAPELIB: OFF Language Bindings: ENABLE_ada: OFF ENABLE_cxx: ON ENABLE_d: OFF ENABLE_f95: ON ENABLE_java: ON ENABLE_lua: OFF ENABLE_ocaml: OFF ENABLE_octave: OFF ENABLE_pdl: OFF ENABLE_python: ON ENABLE_qt: OFF ENABLE_pyqt4: OFF ENABLE_pyqt5: OFF ENABLE_tcl: ON ENABLE_itcl: OFF ENABLE_tk: OFF ENABLE_itk: OFF ENABLE_wxwidgets: OFF -- Configuring done make -- Generating done -- Build files have been written to: /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build [ 0%] Built target csirocsa [ 1%] Built target deltaT-gen [ 1%] Built target deltaT.h_built [ 2%] Built target tai-utc-gen [ 2%] Built target tai-utc.h_built [ 2%] Built target qsastime [ 2%] Built target plhershey-unicode-gen [ 3%] Built target plhershey-unicode.h_built [ 13%] Built target plplot [ 13%] Built target concatenate_pkgIndex.tcl [ 13%] Built target plplotcxx [ 14%] Built target plplotf95 [ 14%] Built target plplot.tcl_target [ 15%] Built target tclmatrix [ 15%] Built target plplottcltk [ 16%] Built target plplottcltk_Main [ 16%] Built target pltcl [ 16%] Built target tclIndex_tcl [ 16%] Built target _plplotcmodule [ 16%] Built target _plplotcmodule_fixed [ 17%] Built target plplotjavac_wrap [ 21%] Built target plplot_core [ 22%] Built target cairo [ 22%] Built target mem [ 23%] Built target null [ 24%] Built target ps [ 24%] Built target svg [ 24%] Built target test-drv-info [ 25%] Built target xwin [ 25%] Built target test_xwin_dyndriver [ 26%] Built target test_cairo_dyndriver [ 26%] Built target test_mem_dyndriver [ 26%] Built target test_null_dyndriver [ 26%] Built target test_ps_dyndriver [ 28%] Built target test_svg_dyndriver [ 28%] Built target xfig [ 28%] Built target test_xfig_dyndriver [ 28%] Built target test_dyndrivers [ 28%] Built target parity_bit_check [ 28%] Built target pltek [ 28%] Built target workaround_file_generate_bug [ 28%] Built target plf95demolib [ 28%] Built target x33j [ 29%] Built target x00j [ 29%] Built target x01j [ 29%] Built target x02j [ 29%] Built target x03j [ 30%] Built target x04j [ 30%] Built target x05j [ 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target plhershey-unicode-gen [ 3%] Built target plhershey-unicode.h_built [ 13%] Built target plplot [ 13%] Built target concatenate_pkgIndex.tcl [ 13%] Built target plplotcxx [ 14%] Built target plplotf95 [ 14%] Built target plplot.tcl_target [ 15%] Built target tclmatrix [ 15%] Built target plplottcltk [ 16%] Built target plplottcltk_Main [ 16%] Built target pltcl [ 16%] Built target tclIndex_tcl [ 16%] Built target _plplotcmodule [ 16%] Built target _plplotcmodule_fixed [ 17%] Built target plplotjavac_wrap [ 21%] Built target plplot_core [ 22%] Built target cairo [ 22%] Built target mem [ 23%] Built target null [ 24%] Built target ps [ 24%] Built target svg [ 24%] Built target test-drv-info [ 25%] Built target xwin [ 25%] Built target test_xwin_dyndriver [ 26%] Built target test_cairo_dyndriver [ 26%] Built target test_mem_dyndriver [ 26%] Built target test_null_dyndriver [ 26%] Built target test_ps_dyndriver [ 28%] Built target test_svg_dyndriver [ 28%] Built target xfig [ 28%] 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Built target x30j [ 38%] Built target x31j [ 47%] Built target plplot_examples [ 57%] Built target plplot_jar [ 78%] Built target tcl_examples [100%] Built target tclIndex_examples_tcl CMake Error at cmake_install.cmake:44 (file): file cannot create directory: /var/lib/jenkins/rmg-spp/plplot.git/install/share/doc/plplot. Maybe need administrative privileges. make: *** [install] Error 1 # install CPU-version of RMG cd $INSTDIR bash: line 53: cd: /var/lib/jenkins/rmg-spp: No such file or directory wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz --2017-02-15 14:20:40-- http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz Resolving downloads.sourceforge.net... 216.34.181.59 Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected. HTTP request sent, awaiting response... 302 Found Location: https://cytranet.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz [following] --2017-02-15 14:20:40-- https://cytranet.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz Resolving cytranet.dl.sourceforge.net... 74.82.59.181 Connecting to cytranet.dl.sourceforge.net|74.82.59.181|:443... connected. 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39.8M 4s 8700K .......... .......... .......... .......... .......... 21% 1.85M 4s 8750K .......... .......... .......... .......... .......... 21% 61.4M 4s 8800K .......... .......... .......... .......... .......... 21% 66.6M 4s 8850K .......... .......... .......... .......... .......... 21% 42.7M 4s 8900K .......... .......... .......... .......... .......... 21% 42.7M 4s 8950K .......... .......... .......... .......... .......... 21% 57.0M 4s 9000K .......... .......... .......... .......... .......... 21% 32.7M 4s 9050K .......... .......... .......... .......... .......... 21% 43.4M 4s 9100K .......... .......... .......... .......... .......... 22% 35.8M 4s 9150K .......... .......... .......... .......... .......... 22% 34.0M 4s 9200K .......... .......... .......... .......... .......... 22% 8.06M 4s 9250K .......... .......... .......... .......... .......... 22% 22.6M 4s 9300K .......... .......... .......... .......... .......... 22% 39.2M 4s 9350K .......... .......... .......... .......... .......... 22% 11.5M 4s 9400K .......... .......... .......... .......... .......... 22% 18.3M 4s 9450K .......... .......... .......... .......... .......... 22% 1.89M 4s 9500K .......... .......... .......... .......... .......... 23% 61.3M 4s 9550K .......... .......... .......... .......... .......... 23% 41.0M 4s 9600K .......... .......... .......... .......... .......... 23% 56.2M 4s 9650K .......... .......... .......... .......... .......... 23% 45.9M 4s 9700K .......... .......... .......... .......... .......... 23% 51.7M 4s 9750K .......... .......... .......... .......... .......... 23% 38.6M 4s 9800K .......... .......... .......... .......... .......... 23% 31.8M 4s 9850K .......... .......... .......... .......... .......... 23% 60.7M 3s 9900K .......... .......... .......... .......... .......... 24% 33.1M 3s 9950K .......... .......... .......... .......... .......... 24% 17.9M 3s 10000K .......... .......... .......... .......... .......... 24% 9.75M 3s 10050K .......... .......... .......... .......... .......... 24% 19.7M 3s 10100K .......... .......... .......... .......... .......... 24% 35.4M 3s 10150K .......... .......... .......... .......... .......... 24% 9.60M 3s 10200K .......... .......... .......... .......... .......... 24% 1.92M 3s 10250K .......... .......... .......... .......... .......... 24% 31.1M 3s 10300K .......... .......... .......... .......... .......... 25% 64.1M 3s 10350K .......... .......... .......... .......... .......... 25% 47.8M 3s 10400K .......... .......... .......... .......... .......... 25% 44.9M 3s 10450K .......... .......... .......... .......... .......... 25% 61.3M 3s 10500K .......... .......... .......... .......... .......... 25% 34.4M 3s 10550K .......... .......... .......... .......... .......... 25% 54.8M 3s 10600K .......... .......... .......... .......... .......... 25% 36.6M 3s 10650K .......... .......... .......... .......... .......... 25% 36.8M 3s 10700K .......... .......... .......... .......... .......... 25% 41.3M 3s 10750K .......... .......... .......... .......... .......... 26% 6.73M 3s 10800K .......... .......... .......... .......... .......... 26% 25.0M 3s 10850K .......... .......... .......... .......... .......... 26% 24.6M 3s 10900K .......... .......... .......... .......... .......... 26% 12.6M 3s 10950K .......... .......... .......... .......... .......... 26% 1.87M 3s 11000K .......... .......... .......... .......... .......... 26% 41.5M 3s 11050K .......... .......... .......... .......... .......... 26% 40.0M 3s 11100K .......... .......... .......... .......... .......... 26% 49.8M 3s 11150K .......... .......... .......... .......... .......... 27% 31.2M 3s 11200K .......... .......... .......... .......... .......... 27% 37.1M 3s 11250K .......... .......... .......... .......... .......... 27% 53.0M 3s 11300K .......... .......... .......... .......... .......... 27% 42.8M 3s 11350K .......... .......... .......... .......... .......... 27% 27.1M 3s 11400K .......... .......... .......... .......... .......... 27% 42.2M 3s 11450K .......... .......... .......... .......... .......... 27% 36.8M 3s 11500K .......... .......... .......... .......... .......... 27% 27.2M 3s 11550K .......... .......... .......... .......... .......... 28% 8.13M 3s 11600K .......... .......... .......... .......... .......... 28% 25.1M 3s 11650K .......... .......... .......... .......... .......... 28% 14.6M 3s 11700K .......... .......... .......... .......... .......... 28% 16.5M 3s 11750K .......... .......... .......... .......... .......... 28% 1.96M 3s 11800K .......... .......... .......... .......... .......... 28% 29.3M 3s 11850K .......... .......... .......... .......... .......... 28% 74.0M 3s 11900K .......... .......... .......... .......... .......... 28% 48.0M 3s 11950K .......... .......... .......... .......... .......... 29% 21.3M 3s 12000K .......... .......... .......... .......... .......... 29% 67.1M 3s 12050K .......... .......... .......... .......... .......... 29% 29.9M 3s 12100K .......... .......... .......... .......... .......... 29% 35.2M 3s 12150K .......... .......... .......... .......... .......... 29% 26.5M 3s 12200K .......... .......... .......... .......... .......... 29% 72.9M 3s 12250K .......... .......... .......... .......... .......... 29% 28.9M 3s 12300K .......... .......... .......... .......... .......... 29% 2.29M 3s 12350K .......... .......... .......... .......... .......... 29% 68.7M 3s 12400K .......... .......... .......... .......... .......... 30% 93.9M 3s 12450K .......... .......... .......... .......... .......... 30% 92.2M 3s 12500K .......... .......... .......... .......... .......... 30% 3.11M 3s 12550K .......... .......... .......... .......... .......... 30% 31.1M 3s 12600K .......... .......... .......... .......... .......... 30% 51.0M 3s 12650K .......... .......... .......... .......... .......... 30% 52.2M 3s 12700K .......... .......... .......... .......... .......... 30% 41.9M 3s 12750K .......... .......... .......... .......... .......... 30% 24.5M 3s 12800K .......... .......... .......... .......... .......... 31% 37.3M 3s 12850K .......... .......... .......... .......... .......... 31% 29.6M 3s 12900K .......... .......... .......... .......... .......... 31% 29.4M 3s 12950K .......... .......... .......... .......... .......... 31% 60.6M 3s 13000K .......... .......... .......... .......... .......... 31% 27.9M 3s 13050K .......... .......... .......... .......... .......... 31% 2.31M 3s 13100K .......... .......... .......... .......... .......... 31% 71.1M 3s 13150K .......... .......... .......... .......... .......... 31% 58.4M 3s 13200K .......... .......... .......... .......... .......... 32% 78.6M 3s 13250K .......... .......... .......... .......... .......... 32% 58.8M 3s 13300K .......... .......... .......... .......... .......... 32% 3.23M 3s 13350K .......... .......... .......... .......... .......... 32% 23.1M 3s 13400K .......... .......... .......... .......... .......... 32% 61.1M 3s 13450K .......... .......... .......... .......... .......... 32% 39.2M 3s 13500K .......... .......... .......... .......... .......... 32% 34.6M 3s 13550K .......... .......... .......... .......... .......... 32% 27.6M 3s 13600K .......... .......... .......... .......... .......... 32% 19.8M 3s 13650K .......... .......... .......... .......... .......... 33% 50.7M 3s 13700K .......... .......... .......... .......... .......... 33% 40.1M 3s 13750K .......... .......... .......... .......... .......... 33% 37.7M 3s 13800K .......... .......... .......... .......... .......... 33% 2.33M 3s 13850K .......... .......... .......... .......... .......... 33% 73.5M 3s 13900K .......... .......... .......... .......... .......... 33% 66.3M 3s 13950K .......... .......... .......... .......... .......... 33% 51.3M 3s 14000K .......... .......... .......... .......... .......... 33% 64.5M 3s 14050K .......... .......... .......... .......... .......... 34% 3.32M 3s 14100K .......... .......... .......... .......... .......... 34% 24.2M 3s 14150K .......... .......... .......... .......... .......... 34% 47.3M 3s 14200K .......... .......... .......... .......... .......... 34% 34.0M 3s 14250K .......... .......... .......... .......... .......... 34% 52.6M 3s 14300K .......... .......... .......... .......... .......... 34% 31.4M 3s 14350K .......... .......... .......... .......... .......... 34% 26.5M 3s 14400K .......... .......... .......... .......... .......... 34% 20.7M 3s 14450K .......... .......... .......... .......... .......... 35% 26.9M 3s 14500K .......... .......... .......... .......... .......... 35% 32.9M 3s 14550K .......... .......... .......... .......... .......... 35% 29.3M 3s 14600K .......... .......... .......... .......... .......... 35% 2.61M 3s 14650K .......... .......... .......... .......... .......... 35% 51.9M 3s 14700K .......... .......... .......... .......... .......... 35% 45.1M 3s 14750K .......... .......... .......... .......... .......... 35% 33.2M 3s 14800K .......... .......... .......... .......... .......... 35% 38.3M 3s 14850K .......... .......... .......... .......... .......... 36% 3.70M 3s 14900K .......... .......... .......... .......... .......... 36% 17.5M 3s 14950K .......... .......... .......... .......... .......... 36% 38.6M 3s 15000K .......... .......... .......... .......... .......... 36% 72.5M 3s 15050K .......... .......... .......... .......... .......... 36% 51.1M 3s 15100K .......... .......... .......... .......... .......... 36% 23.3M 3s 15150K .......... .......... .......... .......... .......... 36% 18.6M 3s 15200K .......... .......... .......... .......... .......... 36% 31.8M 3s 15250K .......... .......... .......... .......... .......... 36% 35.7M 3s 15300K .......... .......... .......... .......... .......... 37% 40.4M 2s 15350K .......... .......... .......... .......... .......... 37% 2.08M 3s 15400K .......... .......... .......... .......... .......... 37% 79.9M 3s 15450K .......... .......... .......... .......... .......... 37% 82.2M 2s 15500K .......... .......... .......... .......... .......... 37% 93.7M 2s 15550K .......... .......... .......... .......... .......... 37% 67.8M 2s 15600K .......... .......... .......... .......... .......... 37% 79.2M 2s 15650K .......... .......... .......... .......... .......... 37% 3.66M 2s 15700K .......... .......... .......... .......... .......... 38% 51.1M 2s 15750K .......... .......... .......... .......... .......... 38% 29.5M 2s 15800K .......... .......... .......... .......... .......... 38% 66.4M 2s 15850K .......... .......... .......... .......... .......... 38% 69.2M 2s 15900K .......... .......... .......... .......... .......... 38% 23.4M 2s 15950K .......... .......... .......... .......... .......... 38% 18.5M 2s 16000K .......... .......... .......... .......... .......... 38% 29.5M 2s 16050K .......... .......... .......... .......... .......... 38% 31.2M 2s 16100K .......... .......... .......... .......... .......... 39% 31.3M 2s 16150K .......... .......... .......... .......... .......... 39% 2.14M 2s 16200K .......... .......... .......... .......... .......... 39% 79.2M 2s 16250K .......... .......... .......... .......... .......... 39% 75.1M 2s 16300K .......... .......... .......... .......... .......... 39% 52.9M 2s 16350K .......... .......... .......... .......... .......... 39% 1.98M 2s 16400K .......... .......... .......... .......... .......... 39% 89.4M 2s 16450K .......... .......... .......... .......... .......... 39% 84.5M 2s 16500K .......... .......... .......... .......... .......... 40% 92.2M 2s 16550K .......... .......... .......... .......... .......... 40% 89.3M 2s 16600K .......... .......... .......... .......... .......... 40% 95.0M 2s 16650K .......... .......... .......... .......... .......... 40% 86.9M 2s 16700K .......... .......... .......... .......... .......... 40% 85.7M 2s 16750K .......... .......... .......... .......... .......... 40% 71.5M 2s 16800K .......... .......... .......... .......... .......... 40% 94.3M 2s 16850K .......... .......... .......... .......... .......... 40% 94.9M 2s 16900K .......... .......... .......... .......... .......... 40% 92.7M 2s 16950K .......... .......... .......... .......... .......... 41% 2.44M 2s 17000K .......... .......... .......... .......... .......... 41% 80.0M 2s 17050K .......... .......... .......... .......... .......... 41% 42.5M 2s 17100K .......... .......... .......... .......... .......... 41% 76.0M 2s 17150K .......... .......... .......... .......... .......... 41% 1.99M 2s 17200K .......... .......... .......... .......... .......... 41% 69.3M 2s 17250K .......... .......... .......... .......... .......... 41% 43.7M 2s 17300K .......... .......... .......... .......... .......... 41% 44.8M 2s 17350K .......... .......... .......... .......... .......... 42% 45.2M 2s 17400K .......... .......... .......... .......... .......... 42% 73.0M 2s 17450K .......... .......... .......... .......... .......... 42% 42.1M 2s 17500K .......... .......... .......... .......... .......... 42% 39.8M 2s 17550K .......... .......... .......... .......... .......... 42% 37.4M 2s 17600K .......... .......... .......... .......... .......... 42% 34.4M 2s 17650K .......... .......... .......... .......... .......... 42% 79.2M 2s 17700K .......... .......... .......... .......... .......... 42% 3.49M 2s 17750K .......... .......... .......... .......... .......... 43% 33.1M 2s 17800K .......... .......... .......... .......... .......... 43% 71.4M 2s 17850K .......... .......... .......... .......... .......... 43% 49.5M 2s 17900K .......... .......... .......... .......... .......... 43% 54.5M 2s 17950K .......... .......... .......... .......... .......... 43% 1.99M 2s 18000K .......... .......... .......... .......... .......... 43% 53.0M 2s 18050K .......... .......... .......... .......... .......... 43% 60.9M 2s 18100K .......... .......... .......... .......... .......... 43% 54.1M 2s 18150K .......... .......... .......... .......... .......... 43% 42.0M 2s 18200K .......... .......... .......... .......... .......... 44% 75.3M 2s 18250K .......... .......... .......... .......... .......... 44% 31.3M 2s 18300K .......... .......... .......... .......... .......... 44% 46.2M 2s 18350K .......... .......... .......... .......... .......... 44% 31.0M 2s 18400K .......... .......... .......... .......... .......... 44% 37.0M 2s 18450K .......... .......... .......... .......... .......... 44% 58.3M 2s 18500K .......... .......... .......... .......... .......... 44% 3.66M 2s 18550K .......... .......... .......... .......... .......... 44% 26.4M 2s 18600K .......... .......... .......... .......... .......... 45% 64.1M 2s 18650K .......... .......... .......... .......... .......... 45% 29.4M 2s 18700K .......... .......... .......... .......... .......... 45% 40.0M 2s 18750K .......... .......... .......... .......... .......... 45% 2.10M 2s 18800K .......... .......... .......... .......... .......... 45% 70.5M 2s 18850K .......... .......... .......... .......... .......... 45% 38.7M 2s 18900K .......... .......... .......... .......... .......... 45% 63.3M 2s 18950K .......... .......... .......... .......... .......... 45% 33.1M 2s 19000K .......... .......... .......... .......... .......... 46% 51.9M 2s 19050K .......... .......... .......... .......... .......... 46% 41.8M 2s 19100K .......... .......... .......... .......... .......... 46% 34.6M 2s 19150K .......... .......... .......... .......... .......... 46% 27.1M 2s 19200K .......... .......... .......... .......... .......... 46% 55.8M 2s 19250K .......... .......... .......... .......... .......... 46% 50.1M 2s 19300K .......... .......... .......... .......... .......... 46% 3.91M 2s 19350K .......... .......... .......... .......... .......... 46% 25.7M 2s 19400K .......... .......... .......... .......... .......... 47% 52.6M 2s 19450K .......... .......... .......... .......... .......... 47% 1.77M 2s 19500K .......... .......... .......... .......... .......... 47% 108M 2s 19550K .......... .......... .......... .......... .......... 47% 82.6M 2s 19600K .......... .......... .......... .......... .......... 47% 111M 2s 19650K .......... .......... .......... .......... .......... 47% 107M 2s 19700K .......... .......... .......... .......... .......... 47% 108M 2s 19750K .......... .......... .......... .......... .......... 47% 80.4M 2s 19800K .......... .......... .......... .......... .......... 47% 28.7M 2s 19850K .......... .......... .......... .......... .......... 48% 32.8M 2s 19900K .......... .......... .......... .......... .......... 48% 28.1M 2s 19950K .......... .......... .......... .......... .......... 48% 25.1M 2s 20000K .......... 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.......... .......... 50% 93.5M 2s 20700K .......... .......... .......... .......... .......... 50% 102M 2s 20750K .......... .......... .......... .......... .......... 50% 1.10M 2s 20800K .......... .......... .......... .......... .......... 50% 91.2M 2s 20850K .......... .......... .......... .......... .......... 50% 92.6M 2s 20900K .......... .......... .......... .......... .......... 50% 86.9M 2s 20950K .......... .......... .......... .......... .......... 50% 92.1M 2s 21000K .......... .......... .......... .......... .......... 50% 98.5M 2s 21050K .......... .......... .......... .......... .......... 51% 103M 2s 21100K .......... .......... .......... .......... .......... 51% 101M 2s 21150K .......... .......... .......... .......... .......... 51% 74.1M 2s 21200K .......... .......... .......... .......... .......... 51% 99.2M 2s 21250K .......... .......... .......... .......... .......... 51% 92.9M 2s 21300K .......... .......... .......... .......... .......... 51% 96.5M 2s 21350K .......... .......... .......... .......... .......... 51% 96.5M 2s 21400K .......... .......... .......... .......... .......... 51% 96.9M 2s 21450K .......... .......... .......... .......... .......... 51% 12.8M 2s 21500K .......... .......... .......... .......... .......... 52% 2.86M 2s 21550K .......... .......... .......... .......... .......... 52% 3.35M 2s 21600K .......... .......... .......... .......... .......... 52% 17.8M 2s 21650K .......... .......... .......... .......... .......... 52% 39.3M 2s 21700K .......... .......... .......... .......... .......... 52% 33.3M 2s 21750K .......... .......... .......... .......... .......... 52% 34.9M 2s 21800K .......... .......... .......... .......... .......... 52% 45.1M 2s 21850K .......... .......... .......... .......... .......... 52% 36.6M 2s 21900K .......... .......... .......... .......... .......... 53% 43.6M 2s 21950K .......... .......... .......... .......... .......... 53% 25.7M 2s 22000K .......... .......... .......... .......... .......... 53% 5.71M 2s 22050K .......... .......... .......... .......... .......... 53% 2.81M 2s 22100K .......... .......... .......... .......... .......... 53% 3.58M 2s 22150K .......... .......... .......... .......... .......... 53% 18.7M 2s 22200K .......... .......... .......... .......... .......... 53% 34.5M 2s 22250K .......... .......... .......... .......... .......... 53% 33.4M 2s 22300K .......... .......... .......... .......... .......... 54% 32.6M 2s 22350K .......... .......... .......... .......... .......... 54% 27.5M 2s 22400K .......... .......... .......... .......... .......... 54% 25.8M 2s 22450K .......... .......... .......... .......... .......... 54% 82.0M 2s 22500K .......... .......... .......... .......... .......... 54% 2.32M 2s 22550K .......... .......... .......... .......... .......... 54% 85.8M 2s 22600K .......... .......... .......... .......... .......... 54% 90.8M 2s 22650K .......... .......... 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37.9M 1s 26000K .......... .......... .......... .......... .......... 62% 41.9M 1s 26050K .......... .......... .......... .......... .......... 63% 54.2M 1s 26100K .......... .......... .......... .......... .......... 63% 22.6M 1s 26150K .......... .......... .......... .......... .......... 63% 25.4M 1s 26200K .......... .......... .......... .......... .......... 63% 3.49M 1s 26250K .......... .......... .......... .......... .......... 63% 14.1M 1s 26300K .......... .......... .......... .......... .......... 63% 38.2M 1s 26350K .......... .......... .......... .......... .......... 63% 1.97M 1s 26400K .......... .......... .......... .......... .......... 63% 49.3M 1s 26450K .......... .......... .......... .......... .......... 64% 43.0M 1s 26500K .......... .......... .......... .......... .......... 64% 35.9M 1s 26550K .......... .......... .......... .......... .......... 64% 50.8M 1s 26600K .......... .......... .......... .......... .......... 64% 36.1M 1s 26650K 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rmg-release_2.1/Force/Makefile rmg-release_2.1/Force/iiforce.c rmg-release_2.1/Force/CorrectForces.cpp rmg-release_2.1/Force/Nlccforce.cpp rmg-release_2.1/Force/CMakeLists.txt rmg-release_2.1/Force/Lforce.cpp rmg-release_2.1/Force/constrain.c rmg-release_2.1/Force/Force.cpp rmg-release_2.1/Force/VirtualForces.cpp rmg-release_2.1/Force/CMakeFiles/ rmg-release_2.1/Force/CMakeFiles/CMakeDirectoryInformation.cmake rmg-release_2.1/Force/CMakeFiles/progress.marks rmg-release_2.1/Force/CMakeFiles/Force.dir/ rmg-release_2.1/Force/CMakeFiles/Force.dir/depend.make rmg-release_2.1/Force/CMakeFiles/Force.dir/build.make rmg-release_2.1/Force/CMakeFiles/Force.dir/flags.make rmg-release_2.1/Force/CMakeFiles/Force.dir/CXX.includecache rmg-release_2.1/Force/CMakeFiles/Force.dir/C.includecache rmg-release_2.1/Force/CMakeFiles/Force.dir/link.txt rmg-release_2.1/Force/CMakeFiles/Force.dir/Force.cpp.rpo rmg-release_2.1/Force/CMakeFiles/Force.dir/cmake_clean_target.cmake rmg-release_2.1/Force/CMakeFiles/Force.dir/progress.make rmg-release_2.1/Force/CMakeFiles/Force.dir/cmake_clean.cmake rmg-release_2.1/Force/CMakeFiles/Force.dir/lforce.c.o rmg-release_2.1/Force/CMakeFiles/Force.dir/nlccforce.c.o rmg-release_2.1/Force/CMakeFiles/Force.dir/depend.internal rmg-release_2.1/Force/CMakeFiles/Force.dir/DependInfo.cmake rmg-release_2.1/Force/cmake_install.cmake rmg-release_2.1/Headers/ rmg-release_2.1/Headers/Functional.h rmg-release_2.1/Headers/my_mpi.h rmg-release_2.1/Headers/GlobalSums.h rmg-release_2.1/Headers/rmg_xc.h rmg-release_2.1/Headers/blacs.h rmg-release_2.1/Headers/BlasWrappers.h rmg-release_2.1/Headers/vdW.h rmg-release_2.1/Headers/InputKey.h rmg-release_2.1/Headers/transition.h cd rmg-release_2.1 mkdir build-cpu; cd build-cpu mkdir: cannot create directory `build-cpu': File exists cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so .. rmg-release_2.1/Headers/fastonebigheader.h rmg-release_2.1/Headers/ErrorFuncs.h rmg-release_2.1/Headers/RmgParallelFft.h rmg-release_2.1/Headers/species.h rmg-release_2.1/Headers/Kpoint.h rmg-release_2.1/Headers/portability.h rmg-release_2.1/Headers/my_scalapack.h rmg-release_2.1/Headers/Plots.h rmg-release_2.1/Headers/RmgGemm.h rmg-release_2.1/Headers/init_var.h rmg-release_2.1/Headers/CheckValue.h rmg-release_2.1/Headers/svn-commit.tmp rmg-release_2.1/Headers/Solvers.h rmg-release_2.1/Headers/rmg_control.h rmg-release_2.1/Headers/svnrev.h rmg-release_2.1/Headers/BesselRoots.h rmg-release_2.1/Headers/RmgShm.h rmg-release_2.1/Headers/Subdiag.h rmg-release_2.1/Headers/mg.h rmg-release_2.1/Headers/pe_control.h rmg-release_2.1/Headers/rmgtypedefs.h rmg-release_2.1/Headers/input.h rmg-release_2.1/Headers/pack_3d.h rmg-release_2.1/Headers/Pw.h rmg-release_2.1/Headers/RmgException.h rmg-release_2.1/Headers/cnpy.h rmg-release_2.1/Headers/BesselRoots.h.sav rmg-release_2.1/Headers/blas.h rmg-release_2.1/Headers/RmgInputFile.h rmg-release_2.1/Headers/Atomic.h rmg-release_2.1/Headers/rmgthreads.h rmg-release_2.1/Headers/grid.h rmg-release_2.1/Headers/lbfgs.h rmg-release_2.1/Headers/common_prototypes.h rmg-release_2.1/Headers/macros.h rmg-release_2.1/Headers/make_conf.h rmg-release_2.1/Headers/GpuAlloc.h rmg-release_2.1/Headers/InternalPseudo.h rmg-release_2.1/Headers/common_prototypes1.h rmg-release_2.1/Headers/State.h rmg-release_2.1/Headers/main.h rmg-release_2.1/Headers/rmg_alloc.h rmg-release_2.1/Headers/const.h rmg-release_2.1/Headers/typedefs.h rmg-release_2.1/Headers/remap_3d.h rmg-release_2.1/Headers/InputOpts.h rmg-release_2.1/Headers/Scalapack.h rmg-release_2.1/Headers/RmgThread.h rmg-release_2.1/Headers/MapElements.h rmg-release_2.1/Headers/AtomicInterpolate.h rmg-release_2.1/Headers/params.h CMake Warning (dev) at SubprojectIncludes/CMakeLists.txt.rmg.inc:5 (add_dependencies): Policy CMP0046 is not set: Error on non-existent dependency in add_dependencies. Run "cmake --help-policy CMP0046" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The dependency target "libspg" of target "rmg-cpu" does not exist. Call Stack (most recent call first): CMakeLists.txt:589 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Boost version: 1.53.0 -- Found the following Boost libraries: -- thread -- system -- iostreams -- program_options -- filesystem -- Configuring done nice make -j12 rmg-cpu -- Generating done -- Build files have been written to: /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/rmg-release_2.1/build-cpu [ 1%] [ 1%] Built target MG Built target InternalPseudo [ 5%] Built target XC1 [ 7%] Built target Force [ 8%] Built target RMG_Spin [ 14%] Built target RmgLib [ 20%] Built target XC [ 24%] Built target RMG_Subdiag [ 29%] Built target Finite_diff [ 29%] [ 29%] Building CXX object Input/CMakeFiles/Input.dir/ReadRmgAtoms.cpp.o Building CXX object Input/CMakeFiles/Input.dir/ReadTFAtoms.cpp.o [ 34%] Built target RMG_Spin_XC [ 44%] Built target US_PP /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/rmg-release_2.1/Misc/LinePlot.cpp:15:22: fatal error: plstream.h: No such file or directory #include <plstream.h> ^ compilation terminated. make[3]: *** [Misc/CMakeFiles/Misc.dir/LinePlot.cpp.o] Error 1 make[3]: *** Waiting for unfinished jobs.... [ 44%] [ 44%] [ 45%] [ 45%] [ 45%] [ 46%] [ 46%] [ 46%] Building CXX object Misc/CMakeFiles/Misc.dir/LinePlot.cpp.o [ 47%] Building CXX object Misc/CMakeFiles/Misc.dir/GpuAlloc.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/GpuAllocHost.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/RmgTimer_Cbindings.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/GlobalSums.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/BaseThread_Cbindings.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/TradeImages_Cbindings.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/GlobalSums_Cbindings.cpp.o Building CXX object Misc/CMakeFiles/Misc.dir/RmgSumAll_Cbindings.cpp.o [ 73%] Built target RMG_Common /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/rmg-release_2.1/Input/ReadRmgAtoms.cpp:32:27: fatal error: openbabel/mol.h: No such file or directory #include <openbabel/mol.h> ^ compilation terminated. /mnt/a/u/system/bwjenkins/openbabel-2.3.2/build/plplot.git/build/rmg-release_2.1/Input/ReadTFAtoms.cpp:32:27: fatal error: openbabel/mol.h: No such file or directory #include <openbabel/mol.h> ^ compilation terminated. make[3]: *** [Input/CMakeFiles/Input.dir/ReadRmgAtoms.cpp.o] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: *** [Input/CMakeFiles/Input.dir/ReadTFAtoms.cpp.o] Error 1 make[2]: *** [Input/CMakeFiles/Input.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... make[2]: *** [Misc/CMakeFiles/Misc.dir/all] Error 2 make[1]: *** [CMakeFiles/rmg-cpu.dir/rule] Error 2 make: *** [rmg-cpu] Error 2 rm -rf /u/system/bwjenkins/scratch/rmg-spp mkdir -p /u/system/bwjenkins/scratch/rmg-spp #cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs /u/system/bwjenkins/scratch/rmg-spp/run.pbs #cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu /u/system/bwjenkins/scratch/rmg-spp/ cp /projects/bluewaters/benchmarking/SPP/rmg/small/* /u/system/bwjenkins/scratch/rmg-spp/ cd /u/system/bwjenkins/scratch/rmg-spp cp /u/system/bwjenkins/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu ./ cat run.pbs | sed -e "s/aprun/time aprun/g" > myrunA.pbs cat myrunA.pbs | sed -e "s/OMP_NUM_THREADS=1/OM_NUM_THREADS=1\nexport LD_LIBRARY_PATH=\$LD_LIBRARY_PATH:\$HOME\/rmg-spp\/openbabel-2.3.2\/install\/lib/g" > myrun.pbs cat -n myrun.pbs MYJOBID=`qsub myrun.pbs` qsub myrun.pbs 1 #!/bin/bash 2 #PBS -N zsmall 3 #PBS -j oe 4 #PBS -l walltime=2:00:00 5 #PBS -l nodes=20:ppn=32:xe 6 7 source /opt/modules/default/init/bash 8 module swap PrgEnv-cray PrgEnv-gnu 9 module load boost 10 module unload darshan 11 module list 12 13 cd $PBS_O_WORKDIR 14 15 export MPICH_MAX_THREAD_SAFETY=serialized 16 export OMP_WAIT_POLICY=passive 17 export MPICH_ENV_DISPLAY=1 18 ulimit -a 19 export MPICH_GNI_MBOX_PLACEMENT=nic 20 export MPICH_GNI_RDMA_THRESHOLD=1024 21 export MPICH_GNI_NUM_BUFS=512 22 export MPICH_GNI_MAX_EAGER_MSG_SIZE=65536 23 24 export OM_NUM_THREADS=1 25 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$HOME/rmg-spp/openbabel-2.3.2/install/lib 26 time aprun -n 640 -N 32 rmg-cpu 302waters.rmg_cpu 27 Job submitted to account: jnc echo MYJOBID=$MYJOBID ~arnoldg/ior/wait_for.sh $MYJOBID MYJOBID=6157552.bw === RUNNING /u/staff/arnoldg/ior/wait_for.sh === Wed Feb 15 14:21:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:26:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:31:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:36:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:41:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:46:21 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:51:22 CST 2017: waiting for 6157552.bw to finish Wed Feb 15 14:56:22 CST 2017: waiting for 6157552.bw to finish qstat: Unknown Job Id Error 6157552.bw tail *.log > ~/rmg-spp/rmg.logtail.txt bash: line 76: /var/lib/jenkins/rmg-spp/rmg.logtail.txt: No such file or directory grep "real" z302water_cpu100.o* grep: z302water_cpu100.o*: No such file or directory MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1 egrep: z302water_cpu100.o*: No such file or directory echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime bash: line 80: /var/lib/jenkins/rmg-spp/rmg.realtime: No such file or directory cat -n ~/rmg-spp/rmg.realtime cat: /var/lib/jenkins/rmg-spp/rmg.realtime: No such file or directory 6157552.bw finished [SSH] exit-status: 1 Build step 'Execute shell script on remote host using ssh' marked build as failure Recording plot data Saving plot series data from: /var/lib/jenkins/workspace/rmg-spp-newpe/rmg.realtime Finished: FAILURE