Started by user arnoldg Building on master in workspace /var/lib/jenkins/workspace/rmg-spp executing script: PATH="/sw/tools/bin:/sw/tools/bin:$PATH" set -v # specify installation directory export INSTDIR=~/rmg-spp #rm -rf $INSTDIR mkdir $INSTDIR module swap PrgEnv-cray PrgEnv-gnu module swap gcc gcc/4.9.3 module load boost module load cmake/3.1.3 module load fftw export CRAYPE_LINK_TYPE=dynamic export CRAY_ADD_RPATH=yes # install openbabel library cd $INSTDIR wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz tar zxvf openbabel-2.3.2.tar.gz cd openbabel-2.3.2/ mkdir build cd build/ cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install .. nice make -j8 make install export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib export CC=cc export CXX=CC export FC=ftn # install plplot library cd $INSTDIR git clone git://git.code.sf.net/p/plplot/plplot plplot.git cd plplot.git/ mkdir build cd build cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install .. make make install # install CPU-version of RMG cd $INSTDIR wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz tar zxvf rmg-release_2.1.tar.gz cd rmg-release_2.1 mkdir build-cpu; cd build-cpu cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so .. nice make -j12 rmg-cpu rm -rf ~/scratch/rmg-spp mkdir -p ~/scratch/rmg-spp cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/ cd ~/scratch/rmg-spp cat run.pbs | grep -v aprun > myrun.pbs echo "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/rmg-spp/openbabel-2.3.2/install/lib" >> myrun.pbs echo "time aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs cat -n myrun.pbs MYJOBID=`qsub myrun.pbs` echo MYJOBID=$MYJOBID ~arnoldg/ior/wait_for.sh $MYJOBID tail *.log > ~/rmg-spp/rmg.logtail.txt grep "real" z302water_cpu100.o* MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime cat -n ~/rmg-spp/rmg.realtime # specify installation directory export INSTDIR=~/rmg-spp #rm -rf $INSTDIR mkdir $INSTDIR mkdir: cannot create directory `/u/system/bwjenkins/rmg-spp': File exists module swap PrgEnv-cray PrgEnv-gnu ${MODULESHOME}/bin/modulecmd bash $* ATP_HOME=/opt/cray/atp/2.0.4 ;export ATP_HOME;ATP_IGNORE_SIGTERM=1 ;export ATP_IGNORE_SIGTERM;ATP_MRNET_COMM_PATH=/opt/cray/atp/2.0.4/libexec/atp_mrnet_commnode_wrapper ;export ATP_MRNET_COMM_PATH;ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/2.0.4/libApp/\ ;export ATP_POST_LINK_OPTS;CRAYOS_VERSION=5.2.82 ;export CRAYOS_VERSION;CRAYPE_DIR=/opt/cray/craype/2.5.8 ;export CRAYPE_DIR;CRAYPE_NETWORK_TARGET=gemini ;export CRAYPE_NETWORK_TARGET;CRAYPE_VERSION=2.5.8 ;export CRAYPE_VERSION;CRAY_ALPS_INCLUDE_OPTS=-I/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/include ;export CRAY_ALPS_INCLUDE_OPTS;CRAY_ALPS_POST_LINK_OPTS=-L/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64 ;export CRAY_ALPS_POST_LINK_OPTS;CRAY_CPU_TARGET=interlagos ;export CRAY_CPU_TARGET;CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/include\ -I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include\ ;export CRAY_DMAPP_INCLUDE_OPTS;CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64 ;export CRAY_DMAPP_POST_LINK_OPTS;CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include ;export CRAY_GNI_HEADERS_INCLUDE_OPTS;CRAY_LD_LIBRARY_PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/16.11.1 ;export CRAY_LIBSCI_BASE_DIR;CRAY_LIBSCI_DIR=/opt/cray/libsci/16.11.1 ;export CRAY_LIBSCI_DIR;CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/16.11.1/GNU/4.9/x86_64 ;export CRAY_LIBSCI_PREFIX_DIR;CRAY_LIBSCI_VERSION=16.11.1 ;export CRAY_LIBSCI_VERSION;CRAY_MPICH2_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH2_DIR;CRAY_MPICH2_VER=7.5.0 ;export CRAY_MPICH2_VER;CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.5.0/gni ;export CRAY_MPICH_BASEDIR;CRAY_MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH_DIR;CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.5.0 ;export CRAY_MPICH_ROOTDIR;CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/include ;export CRAY_PMI_INCLUDE_OPTS;CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64 ;export CRAY_PMI_POST_LINK_OPTS;CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini ;export CRAY_PRE_COMPILE_OPTS;CRAY_PRGENVGNU=loaded ;export CRAY_PRGENVGNU;CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/include\ -I/opt/cray/krca/1.0.0-2.0502.63139.4.30.gem/include\ -I/opt/cray-hss-devel/7.2.0/include\ ;export CRAY_RCA_INCLUDE_OPTS;CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64\ -lrca\ ;export CRAY_RCA_POST_LINK_OPTS;CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/include ;export CRAY_UDREG_INCLUDE_OPTS;CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64 ;export CRAY_UDREG_POST_LINK_OPTS;CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/include ;export CRAY_UGNI_INCLUDE_OPTS;CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64 ;export CRAY_UGNI_POST_LINK_OPTS;CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/include ;export CRAY_XPMEM_INCLUDE_OPTS;CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64 ;export CRAY_XPMEM_POST_LINK_OPTS;DMAPP_ABORT_ON_ERROR=1 ;export DMAPP_ABORT_ON_ERROR;DVS_INCLUDE_OPTS=-I/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/include ;export DVS_INCLUDE_OPTS;DVS_VERSION=0.9.0 ;export DVS_VERSION;GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LIBSCI_BASE_DIR=/opt/cray/libsci/16.11.1 ;export LIBSCI_BASE_DIR;LIBSCI_VERSION=16.11.1 ;export LIBSCI_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.0.2.TAS7-1490665589_71674cf-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t7/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t7/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;MODULEPATH=/sw/EasyBuild/modules/all:/sw/bw/modulefiles:/sw/xe/modulefiles:/usr/local/modulefiles:/opt/cray/gem/modulefiles:/opt/cray/craype/2.5.8/modulefiles:/opt/cray/modulefiles:/opt/modulefiles ;export MODULEPATH;MPICH_ABORT_ON_ERROR=1 ;export MPICH_ABORT_ON_ERROR;MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export MPICH_DIR;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t7/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t7/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_ACML_DEFAULT_DIR_CRAY=gfortran64 ;export PE_ACML_DEFAULT_DIR_CRAY;PE_ACML_DEFAULT_DIR_DEFAULT64=_int64 ;export PE_ACML_DEFAULT_DIR_DEFAULT64;PE_ACML_DEFAULT_DIR_GNU=gfortran64 ;export PE_ACML_DEFAULT_DIR_GNU;PE_ACML_DEFAULT_DIR_INTEL=ifort64 ;export PE_ACML_DEFAULT_DIR_INTEL;PE_ACML_DEFAULT_DIR_OPENMP=_mp ;export PE_ACML_DEFAULT_DIR_OPENMP;PE_ACML_DEFAULT_DIR_PGI=pgi64 ;export PE_ACML_DEFAULT_DIR_PGI;PE_ACML_DEFAULT_TARGET_interlagos=_fma4 ;export PE_ACML_DEFAULT_TARGET_interlagos;PE_ACML_DEFAULT_TARGET_x86_64= ;export PE_ACML_DEFAULT_TARGET_x86_64;PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/acml/5.3.1/@PE_ACML_DEFAULT_DIR@@PE_ACML_DEFAULT_TARGET@@PE_ACML_DEFAULT_DIR_OPENMP@@PE_ACML_DEFAULT_DIR_DEFAULT64@/lib/pkgconfig ;export PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0/CRAY/8.3/lib/pkgconfig:/opt/cray/ga/5.3.0.7/CRAY/8.4/lib/pkgconfig ;export PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH;PE_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_CXX_PKGCONFIG_LIBS;PE_ENV=GNU ;export PE_ENV;PE_FFTW_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_DEFAULT_REQUIRED_PRODUCTS;PE_FFTW_DEFAULT_TARGET_abudhabi=abudhabi ;export PE_FFTW_DEFAULT_TARGET_abudhabi;PE_FFTW_DEFAULT_TARGET_broadwell=broadwell ;export PE_FFTW_DEFAULT_TARGET_broadwell;PE_FFTW_DEFAULT_TARGET_haswell=haswell ;export PE_FFTW_DEFAULT_TARGET_haswell;PE_FFTW_DEFAULT_TARGET_interlagos=interlagos ;export PE_FFTW_DEFAULT_TARGET_interlagos;PE_FFTW_DEFAULT_TARGET_ivybridge=ivybridge ;export PE_FFTW_DEFAULT_TARGET_ivybridge;PE_FFTW_DEFAULT_TARGET_mic_knl=mic_knl ;export PE_FFTW_DEFAULT_TARGET_mic_knl;PE_FFTW_DEFAULT_TARGET_sandybridge=sandybridge ;export PE_FFTW_DEFAULT_TARGET_sandybridge;PE_FFTW_DEFAULT_TARGET_share=share ;export PE_FFTW_DEFAULT_TARGET_share;PE_FFTW_DEFAULT_TARGET_x86_64=x86_64 ;export PE_FFTW_DEFAULT_TARGET_x86_64;PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.10/@PE_FFTW_DEFAULT_TARGET@/lib/pkgconfig ;export PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_FORTRAN_PKGCONFIG_LIBS;PE_GA_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_GA_DEFAULT_FIXED_PRGENV;PE_GA_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_GA_DEFAULT_GENCOMPILERS_GNU;PE_GA_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_GA_DEFAULT_GENCOMPS_GNU;PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/ga/5.3.0.7/@PRGENV@/@PE_GA_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_GA_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_GA_DEFAULT_VOLATILE_PRGENV;PE_HDF5_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_HDF5_DEFAULT_FIXED_PRGENV;PE_HDF5_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_DEFAULT_GENCOMPS_GNU;PE_HDF5_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5/1.10.0/@PRGENV@/@PE_HDF5_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_HDF5_DEFAULT_VOLATILE_PRGENV;PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU;PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5-parallel/1.10.0/@PRGENV@/@PE_HDF5_PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf/4.4.1/INTEL/15.0/lib/pkgconfig:/opt/cray/mpt/7.5.0/gni/mpich-intel/16.0/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/INTEL/15.0/lib/pkgconfig:/opt/cray/hdf5/1.10.0/INTEL/15.0/lib/pkgconfig:/opt/cray/ga/5.3.0.7/INTEL/15.0/lib/pkgconfig ;export PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64=4.9 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64=49 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20=nv20 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35=nv35 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35;PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_@accelerator@ ;export PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci_acc/16.03.1/@PRGENV@/@PE_LIBSCI_ACC_DEFAULT_GENCOMPS@/@PE_LIBSCI_ACC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64;PE_LIBSCI_DEFAULT_OMP_REQUIRES= ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES;PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp;PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_DEFAULT_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.11.1/@PRGENV@/@PE_LIBSCI_DEFAULT_GENCOMPS@/@PE_LIBSCI_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_GENCOMPS_CRAY_x86_64;PE_LIBSCI_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_GENCOMPS_GNU_mic_knl;PE_LIBSCI_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_GENCOMPS_GNU_x86_64;PE_LIBSCI_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_GENCOMPS_INTEL_x86_64;PE_LIBSCI_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_GENCOMPS_PGI_x86_64;PE_LIBSCI_MODULE_NAME=cray-libsci/16.11.1 ;export PE_LIBSCI_MODULE_NAME;PE_LIBSCI_OMP_REQUIRES= ;export PE_LIBSCI_OMP_REQUIRES;PE_LIBSCI_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_OMP_REQUIRES_openmp;PE_LIBSCI_PKGCONFIG_LIBS=libsci_mpi:libsci ;export PE_LIBSCI_PKGCONFIG_LIBS;PE_LIBSCI_PKGCONFIG_VARIABLES=PE_LIBSCI_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_PKGCONFIG_VARIABLES;PE_LIBSCI_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_REQUIRED_PRODUCTS;PE_LIBSCI_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.11.1/@PRGENV@/@PE_LIBSCI_GENCOMPS@/@PE_LIBSCI_TARGET@/lib/pkgconfig ;export PE_LIBSCI_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_VOLATILE_PRGENV;PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_MPICH_CXX_PKGCONFIG_LIBS;PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64;PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64;PE_MPICH_DEFAULT_FIXED_PRGENV=INTEL ;export PE_MPICH_DEFAULT_FIXED_PRGENV;PE_MPICH_DEFAULT_GENCOMPILERS_CRAY=8.4 ;export PE_MPICH_DEFAULT_GENCOMPILERS_CRAY;PE_MPICH_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_MPICH_DEFAULT_GENCOMPILERS_GNU;PE_MPICH_DEFAULT_GENCOMPILERS_PGI=15.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_PGI;PE_MPICH_DEFAULT_GENCOMPS_CRAY=84 ;export PE_MPICH_DEFAULT_GENCOMPS_CRAY;PE_MPICH_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_MPICH_DEFAULT_GENCOMPS_GNU;PE_MPICH_DEFAULT_GENCOMPS_PGI=153 ;export PE_MPICH_DEFAULT_GENCOMPS_PGI;PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/mpich-@PRGENV@@PE_MPICH_DEFAULT_DIR_DEFAULT64@/@PE_MPICH_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_MPICH_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ PGI ;export PE_MPICH_DEFAULT_VOLATILE_PRGENV;PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_MPICH_FORTRAN_PKGCONFIG_LIBS;PE_MPICH_MODULE_NAME=cray-mpich ;export PE_MPICH_MODULE_NAME;PE_MPICH_MULTITHREADED_LIBS_multithreaded=_mt ;export PE_MPICH_MULTITHREADED_LIBS_multithreaded;PE_MPICH_NV_LIBS= ;export PE_MPICH_NV_LIBS;PE_MPICH_NV_LIBS_nvidia20=-lcudart ;export PE_MPICH_NV_LIBS_nvidia20;PE_MPICH_NV_LIBS_nvidia35=-lcudart ;export PE_MPICH_NV_LIBS_nvidia35;PE_MPICH_PKGCONFIG_LIBS=mpich ;export PE_MPICH_PKGCONFIG_LIBS;PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_MULTITHREADED_LIBS_@multithreaded@ ;export PE_MPICH_PKGCONFIG_VARIABLES;PE_MPICH_TARGET_VAR_nvidia20=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia20;PE_MPICH_TARGET_VAR_nvidia35=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia35;PE_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_DEFAULT_FIXED_PRGENV;PE_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_DEFAULT_GENCOMPS_GNU;PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5 ;export PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf/4.4.1/@PRGENV@/@PE_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5_PARALLEL:PE_MPICH ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf-hdf5parallel/4.4.1/@PRGENV@/@PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_PAPI_DEFAULT_ACCEL_LIBS= ;export PE_PAPI_DEFAULT_ACCEL_LIBS;PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35;PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES=PE_PAPI_ACCEL_LIBS_@accelerator@ ;export PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES;PE_PAPI_DEFAULT_TARGET_VAR_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_TARGET_VAR_nvidia35;PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/@PRGENV@/@PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64;PE_PETSC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI:PE_HDF5_PARALLEL:PE_TPSL ;export PE_PETSC_DEFAULT_REQUIRED_PRODUCTS;PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/petsc/3.7.2.1/complex/@PRGENV@/@PE_PETSC_DEFAULT_GENCOMPS@/@PE_PETSC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PETSC_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_PETSC_DEFAULT_VOLATILE_PRGENV;PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0/PGI/15.3/lib/pkgconfig:/opt/cray/ga/5.3.0.7/PGI/15.3/lib/pkgconfig ;export PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH;PE_PKGCONFIG_DEFAULT_PRODUCTS=PE_TRILINOS:PE_TPSL_64:PE_TPSL:PE_PETSC:PE_PARALLEL_NETCDF:PE_NETCDF_HDF5PARALLEL:PE_NETCDF:PE_MPICH:PE_LIBSCI_ACC:PE_LIBSCI:PE_HDF5_PARALLEL:PE_HDF5:PE_GA:PE_FFTW:PE_ACML ;export PE_PKGCONFIG_DEFAULT_PRODUCTS;PE_PKGCONFIG_LIBS=AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;PE_PKGCONFIG_PRODUCTS_DEFAULT=PE_PAPI ;export PE_PKGCONFIG_PRODUCTS_DEFAULT;PE_PKG_CONFIG_PATH=/opt/cray/cti/1.0.4/lib/pkgconfig ;export PE_PKG_CONFIG_PATH;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS ;export PE_PRODUCT_LIST;PE_SMA_DEFAULT_COMPFLAG= ;export PE_SMA_DEFAULT_COMPFLAG;PE_SMA_DEFAULT_COMPFLAG_GNU=-fcray-pointer ;export PE_SMA_DEFAULT_COMPFLAG_GNU;PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64;PE_SMA_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_PGI_DEFAULT64;PE_SMA_DEFAULT_PKGCONFIG_VARIABLES=PE_SMA_COMPFLAG_@prgenv@ ;export PE_SMA_DEFAULT_PKGCONFIG_VARIABLES;PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/sma@PE_SMA_DEFAULT_DIR_DEFAULT64@/lib64/pkgconfig ;export PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.07.1/@PRGENV@64/@PE_TPSL_64_DEFAULT_GENCOMPS@/@PE_TPSL_64_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_64_DEFAULT_VOLATILE_PRGENV;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.07.1/@PRGENV@/@PE_TPSL_DEFAULT_GENCOMPS@/@PE_TPSL_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_DEFAULT_VOLATILE_PRGENV;PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.5 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64=85 ;export PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64;PE_TRILINOS_DEFAULmodule swap gcc gcc/4.9.3 module load boost module load cmake/3.1.3 module load fftw export CRAYPE_LINK_TYPE=dynamic export CRAY_ADD_RPATH=yes # install openbabel library cd $INSTDIR wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz T_REQUIRED_PRODUCTS=PE_MPICH:PE_HDF5_PARALLEL:PE_NETCDF_HDF5PARALLEL:PE_LIBSCI:PE_TPSL ;export PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS;PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/trilinos/12.6.3.3/@PRGENV@/@PE_TRILINOS_DEFAULT_GENCOMPS@/@PE_TRILINOS_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TRILINOS_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_TRILINOS_DEFAULT_VOLATILE_PRGENV;PKGCONFIG_ENABLED=1 ;export PKGCONFIG_ENABLED;PKG_CONFIG_PATH=/sw/xe/darshan/3.1.3/darshan-3.1.3/lib/pkgconfig:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/pkgconfig:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64/pkgconfig:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64/pkgconfig:/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/lib64/pkgconfig:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64/pkgconfig:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64/pkgconfig:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64/pkgconfig:/opt/cray/craype/2.5.8/pkg-config:/opt/cray/iobuf/2.0.7/lib/pkgconfig:/opt/cray/atp/2.0.4/lib/pkgconfig ;export PKG_CONFIG_PATH;PKG_CONFIG_PATH_DEFAULT=/opt/cray/papi/5.5.0.1/lib64/pkgconfig ;export PKG_CONFIG_PATH_DEFAULT;SHMEM_ABORT_ON_ERROR=1 ;export SHMEM_ABORT_ON_ERROR;XTOS_VERSION=5.2.82 ;export XTOS_VERSION;XTPE_NETWORK_TARGET=gemini ;export XTPE_NETWORK_TARGET;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.0.2.TAS7-1490665589_71674cf-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;unset ASSEMBLER_X86_64;unset CC_X86_64;unset CRAYLIBS_X86_64;unset CRAYLMD_LICENSE_FILE;unset CRAY_BINUTILS_BIN;unset CRAY_BINUTILS_ROOT;unset CRAY_BINUTILS_VERSION;unset CRAY_CC_VERSION;unset CRAY_CXX_IPA_LIBS;unset CRAY_FTN_VERSION;unset CRAY_PE_TARGET;unset CRAY_PRGENVCRAY;unset FORTRAN_SYSTEM_MODULE_NAMES;unset FTN_X86_64;unset GCC_X86_64;unset INCLUDE_PATH_X86_64;unset LINKER_X86_64;unset NLSPATH;unset PE_LEVEL; ${MODULESHOME}/bin/modulecmd bash $* GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.0.2.TAS7-1490665589_71674cf-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t7/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t7/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t7/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t7/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.0.2.TAS7-1490665589_71674cf-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* BOOST_ROOT=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2 ;export BOOST_ROOT;CRAY_BOOST_DIR=/sw/xe/boost/1.53.0 ;export CRAY_BOOST_DIR;CRAY_BOOST_INCLUDE_OPTS=-I/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/include ;export CRAY_BOOST_INCLUDE_OPTS;CRAY_BOOST_POST_LINK_OPTS=-L/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib ;export CRAY_BOOST_POST_LINK_OPTS;CRAY_BOOST_VERSION=1.53.0 ;export CRAY_BOOST_VERSION;LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.0.2.TAS7-1490665589_71674cf-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0 ;export LOADEDMODULES;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS:CRAY_BOOST ;export PE_PRODUCT_LIST;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.0.2.TAS7-1490665589_71674cf-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.0.2.TAS7-1490665589_71674cf-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3 ;export LOADEDMODULES;PATH=/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t7/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t7/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.0.2.TAS7-1490665589_71674cf-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3 ;export _LMFILES_; ${MODULESHOME}/bin/modulecmd bash $* CRAY_FFTW_VERSION=3.3.4.10 ;export CRAY_FFTW_VERSION;CRAY_LD_LIBRARY_PATH=/opt/cray/fftw/3.3.4.10/interlagos/lib:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;FFTW_DIR=/opt/cray/fftw/3.3.4.10/interlagos/lib ;export FFTW_DIR;FFTW_INC=/opt/cray/fftw/3.3.4.10/interlagos/include ;export FFTW_INC;FFTW_VERSION=3.3.4.10 ;export FFTW_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.0.2.TAS7-1490665589_71674cf-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3:fftw/3.3.4.10 ;export LOADEDMODULES;MANPATH=/opt/cray/fftw/3.3.4.10/share/man:/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t7/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t7/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/fftw/3.3.4.10/interlagos/bin:/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t7/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t7/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_FFTW_OMP_REQUIRES=\ ;export PE_FFTW_OMP_REQUIRES;PE_FFTW_OMP_REQUIRES_openmp=_mp ;export PE_FFTW_OMP_REQUIRES_openmp;PE_FFTW_PKGCONFIG_LIBS=fftw3f_mpi:libfftw3f_threads:fftw3f:fftw3_mpi:libfftw3_threads:fftw3 ;export PE_FFTW_PKGCONFIG_LIBS;PE_FFTW_PKGCONFIG_VARIABLES=PE_FFTW_OMP_REQUIRES_@openmp@ ;export PE_FFTW_PKGCONFIG_VARIABLES;PE_FFTW_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_REQUIRED_PRODUCTS;PE_FFTW_TARGET_abudhabi=abudhabi ;export PE_FFTW_TARGET_abudhabi;PE_FFTW_TARGET_broadwell=broadwell ;export PE_FFTW_TARGET_broadwell;PE_FFTW_TARGET_haswell=haswell ;export PE_FFTW_TARGET_haswell;PE_FFTW_TARGET_interlagos=interlagos ;export PE_FFTW_TARGET_interlagos;PE_FFTW_TARGET_ivybridge=ivybridge ;export PE_FFTW_TARGET_ivybridge;PE_FFTW_TARGET_mic_knl=mic_knl ;export PE_FFTW_TARGET_mic_knl;PE_FFTW_TARGET_sandybridge=sandybridge ;export PE_FFTW_TARGET_sandybridge;PE_FFTW_TARGET_share=share ;export PE_FFTW_TARGET_share;PE_FFTW_TARGET_x86_64=x86_64 ;export PE_FFTW_TARGET_x86_64;PE_FFTW_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.10/@PE_FFTW_TARGET@/lib/pkgconfig ;export PE_FFTW_VOLATILE_PKGCONFIG_PATH;PE_PKGCONFIG_PRODUCTS=PE_FFTW:PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.0.2.TAS7-1490665589_71674cf-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3:/opt/cray/modulefiles/fftw/3.3.4.10 ;export _LMFILES_; --2018-01-25 10:12:32-- http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz Resolving downloads.sourceforge.net... 216.34.181.59 Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected. HTTP request sent, awaiting response... 302 Found Location: https://cytranet.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz [following] --2018-01-25 10:12:32-- https://cytranet.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz Resolving cytranet.dl.sourceforge.net... 74.82.59.181 Connecting to cytranet.dl.sourceforge.net|74.82.59.181|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 20509105 (20M) [application/x-gzip] Saving to: `openbabel-2.3.2.tar.gz.6' 0K .......... .......... .......... .......... .......... 0% 934K 21s 50K .......... .......... .......... .......... .......... 0% 987K 21s 100K .......... .......... .......... .......... .......... 0% 965K 21s 150K .......... .......... .......... .......... .......... 0% 53.0M 16s 200K .......... .......... .......... .......... .......... 1% 967K 17s 250K .......... .......... .......... .......... .......... 1% 79.8M 14s 300K .......... .......... .......... .......... .......... 1% 84.0M 12s 350K .......... .......... .......... .......... .......... 1% 975K 13s 400K .......... .......... .......... .......... .......... 2% 58.0M 11s 450K .......... .......... .......... .......... .......... 2% 65.9M 10s 500K .......... .......... .......... .......... .......... 2% 2.01M 10s 550K .......... .......... .......... .......... .......... 2% 1.73M 10s 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2.40M 6s 2650K .......... .......... .......... .......... .......... 13% 2.34M 6s 2700K .......... .......... .......... .......... .......... 13% 2.33M 6s 2750K .......... .......... .......... .......... .......... 13% 3.60M 6s 2800K .......... .......... .......... .......... .......... 14% 5.96M 5s 2850K .......... .......... .......... .......... .......... 14% 2.47M 5s 2900K .......... .......... .......... .......... .......... 14% 2.24M 5s 2950K .......... .......... .......... .......... .......... 14% 19.2M 5s 3000K .......... .......... .......... .......... .......... 15% 2.48M 5s 3050K .......... .......... .......... .......... .......... 15% 2.27M 5s 3100K .......... .......... .......... .......... .......... 15% 2.28M 5s 3150K .......... .......... .......... .......... .......... 15% 2.43M 5s 3200K .......... .......... .......... .......... .......... 16% 2.35M 5s 3250K .......... .......... .......... .......... .......... 16% 60.4M 5s 3300K .......... .......... .......... .......... .......... 16% 2.33M 5s 3350K .......... .......... .......... .......... .......... 16% 2.32M 5s 3400K .......... .......... .......... .......... .......... 17% 4.33M 5s 3450K .......... .......... .......... .......... .......... 17% 4.91M 5s 3500K .......... .......... .......... .......... .......... 17% 2.39M 5s 3550K .......... .......... .......... .......... .......... 17% 2.31M 5s 3600K .......... .......... .......... .......... .......... 18% 2.37M 5s 3650K .......... .......... .......... .......... .......... 18% 2.36M 5s 3700K .......... .......... .......... .......... .......... 18% 81.7M 5s 3750K .......... .......... .......... .......... .......... 18% 2.26M 5s 3800K .......... .......... .......... .......... .......... 19% 2.41M 5s 3850K .......... .......... .......... .......... .......... 19% 2.33M 5s 3900K .......... .......... .......... .......... .......... 19% 54.2M 5s 3950K .......... .......... .......... .......... .......... 19% 2.33M 5s 4000K .......... .......... .......... .......... .......... 20% 2.36M 5s 4050K .......... .......... .......... .......... .......... 20% 2.40M 5s 4100K .......... .......... .......... .......... .......... 20% 1.04M 5s 4150K .......... .......... .......... .......... .......... 20% 111M 5s 4200K .......... .......... .......... .......... .......... 21% 103M 5s 4250K .......... .......... .......... .......... .......... 21% 3.17M 5s 4300K .......... .......... .......... .......... .......... 21% 2.41M 5s 4350K .......... .......... .......... .......... .......... 21% 3.17M 5s 4400K .......... .......... .......... .......... .......... 22% 7.54M 5s 4450K .......... .......... .......... .......... .......... 22% 2.39M 5s 4500K .......... .......... .......... .......... .......... 22% 2.24M 5s 4550K .......... .......... .......... .......... .......... 22% 13.6M 5s 4600K .......... .......... .......... .......... .......... 23% 2.71M 5s 4650K .......... .......... 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65.6M 5s 5350K .......... .......... .......... .......... .......... 26% 2.34M 5s 5400K .......... .......... .......... .......... .......... 27% 2.35M 5s 5450K .......... .......... .......... .......... .......... 27% 2.54M 5s 5500K .......... .......... .......... .......... .......... 27% 82.9M 5s 5550K .......... .......... .......... .......... .......... 27% 2.25M 5s 5600K .......... .......... .......... .......... .......... 28% 2.35M 5s 5650K .......... .......... .......... .......... .......... 28% 2.38M 5s 5700K .......... .......... .......... .......... .......... 28% 2.37M 5s 5750K .......... .......... .......... .......... .......... 28% 58.4M 5s 5800K .......... .......... .......... .......... .......... 29% 2.33M 5s 5850K .......... .......... .......... .......... .......... 29% 2.35M 5s 5900K .......... .......... .......... .......... .......... 29% 2.33M 5s 5950K .......... .......... .......... .......... .......... 29% 4.11M 5s 6000K .......... .......... 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4.85M 4s 6700K .......... .......... .......... .......... .......... 33% 2.36M 4s 6750K .......... .......... .......... .......... .......... 33% 2.29M 4s 6800K .......... .......... .......... .......... .......... 34% 2.37M 4s 6850K .......... .......... .......... .......... .......... 34% 2.34M 4s 6900K .......... .......... .......... .......... .......... 34% 50.3M 4s 6950K .......... .......... .......... .......... .......... 34% 2.33M 4s 7000K .......... .......... .......... .......... .......... 35% 2.39M 4s 7050K .......... .......... .......... .......... .......... 35% 2.36M 4s 7100K .......... .......... .......... .......... .......... 35% 69.5M 4s 7150K .......... .......... .......... .......... .......... 35% 2.28M 4s 7200K .......... .......... .......... .......... .......... 36% 2.35M 4s 7250K .......... .......... .......... .......... .......... 36% 2.40M 4s 7300K .......... .......... .......... .......... .......... 36% 2.37M 4s 7350K .......... .......... 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96.0M 3s 9400K .......... .......... .......... .......... .......... 47% 91.7M 3s 9450K .......... .......... .......... .......... .......... 47% 2.65M 3s 9500K .......... .......... .......... .......... .......... 47% 4.29M 3s 9550K .......... .......... .......... .......... .......... 47% 2.30M 3s 9600K .......... .......... .......... .......... .......... 48% 5.23M 3s 9650K .......... .......... .......... .......... .......... 48% 4.16M 3s 9700K .......... .......... .......... .......... .......... 48% 2.34M 3s 9750K .......... .......... .......... .......... .......... 48% 2.35M 3s 9800K .......... .......... .......... .......... .......... 49% 2.35M 3s 9850K .......... .......... .......... .......... .......... 49% 59.4M 3s 9900K .......... .......... .......... .......... .......... 49% 2.34M 3s 9950K .......... .......... .......... .......... .......... 49% 2.28M 3s 10000K .......... .......... .......... .......... .......... 50% 2.38M 3s 10050K .......... .......... 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2018-01-25 10:12:39 (2.97 MB/s) - `openbabel-2.3.2.tar.gz.6' saved [20509105/20509105] tar zxvf openbabel-2.3.2.tar.gz openbabel-2.3.2/ openbabel-2.3.2/AUTHORS openbabel-2.3.2/ChangeLog openbabel-2.3.2/ChangeLog.1.x openbabel-2.3.2/cmake/ openbabel-2.3.2/CMakeLists.txt openbabel-2.3.2/COPYING openbabel-2.3.2/CTestConfig.cmake openbabel-2.3.2/data/ openbabel-2.3.2/doc/ openbabel-2.3.2/Doxyfile openbabel-2.3.2/include/ openbabel-2.3.2/INSTALL openbabel-2.3.2/NEWS openbabel-2.3.2/openbabel-2.0.pc.cmake openbabel-2.3.2/OpenBabel2Config.cmake.in openbabel-2.3.2/OpenBabel2ConfigVersion.cmake.in openbabel-2.3.2/README openbabel-2.3.2/scripts/ openbabel-2.3.2/src/ openbabel-2.3.2/test/ openbabel-2.3.2/THANKS openbabel-2.3.2/tools/ openbabel-2.3.2/windows-vc2008/ openbabel-2.3.2/windows-vc2008/default_build.bat openbabel-2.3.2/windows-vc2008/Distribution/ openbabel-2.3.2/windows-vc2008/include/ openbabel-2.3.2/windows-vc2008/libs/ openbabel-2.3.2/windows-vc2008/minimal_build.bat 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openbabel-2.3.2/src/formats/gausscubeformat.cpp openbabel-2.3.2/src/formats/gaussformat.cpp openbabel-2.3.2/src/formats/gausszmatformat.cpp openbabel-2.3.2/src/formats/genbankformat.cpp openbabel-2.3.2/src/formats/getinchi.cpp openbabel-2.3.2/src/formats/ghemicalformat.cpp openbabel-2.3.2/src/formats/groformat.cpp openbabel-2.3.2/src/formats/gromos96format.cpp openbabel-2.3.2/src/formats/gulpformat.cpp openbabel-2.3.2/src/formats/hinformat.cpp openbabel-2.3.2/src/formats/inchiformat.cpp openbabel-2.3.2/src/formats/jaguarformat.cpp openbabel-2.3.2/src/formats/libinchi/ openbabel-2.3.2/src/formats/lmpdatformat.cpp openbabel-2.3.2/src/formats/MCDLformat.cpp openbabel-2.3.2/src/formats/mdlformat.cpp openbabel-2.3.2/src/formats/mmcifformat.cpp openbabel-2.3.2/src/formats/mmodformat.cpp openbabel-2.3.2/src/formats/MNAformat.cpp openbabel-2.3.2/src/formats/mol2format.cpp openbabel-2.3.2/src/formats/moldenformat.cpp openbabel-2.3.2/src/formats/molproformat.cpp openbabel-2.3.2/src/formats/molreport.cpp openbabel-2.3.2/src/formats/mopacformat.cpp openbabel-2.3.2/src/formats/mpdformat.cpp openbabel-2.3.2/src/formats/mpqcformat.cpp openbabel-2.3.2/src/formats/msiformat.cpp openbabel-2.3.2/src/formats/msmsformat.cpp openbabel-2.3.2/src/formats/nulformat.cpp openbabel-2.3.2/src/formats/nwchemformat.cpp openbabel-2.3.2/src/formats/opendxformat.cpp openbabel-2.3.2/src/formats/outformat.cpp openbabel-2.3.2/src/formats/pcmodelformat.cpp openbabel-2.3.2/src/formats/pdbformat.cpp openbabel-2.3.2/src/formats/pdbqtformat.cpp openbabel-2.3.2/src/formats/png2format.cpp openbabel-2.3.2/src/formats/pngformat.cpp openbabel-2.3.2/src/formats/posformat.cpp openbabel-2.3.2/src/formats/povrayformat.cpp openbabel-2.3.2/src/formats/pqrformat.cpp openbabel-2.3.2/src/formats/PQSformat.cpp openbabel-2.3.2/src/formats/pwscfformat.cpp openbabel-2.3.2/src/formats/qchemformat.cpp openbabel-2.3.2/src/formats/reportformat.cpp openbabel-2.3.2/src/formats/rsmiformat.cpp openbabel-2.3.2/src/formats/rxnformat.cpp openbabel-2.3.2/src/formats/shelxformat.cpp openbabel-2.3.2/src/formats/smilesformat.cpp openbabel-2.3.2/src/formats/svgformat.cpp openbabel-2.3.2/src/formats/textformat.cpp openbabel-2.3.2/src/formats/thermoformat.cpp openbabel-2.3.2/src/formats/tinkerformat.cpp openbabel-2.3.2/src/formats/titleformat.cpp openbabel-2.3.2/src/formats/turbomoleformat.cpp openbabel-2.3.2/src/formats/unichemformat.cpp openbabel-2.3.2/src/formats/vaspformat.cpp openbabel-2.3.2/src/formats/viewmolformat.cpp openbabel-2.3.2/src/formats/xedformat.cpp openbabel-2.3.2/src/formats/xml/ openbabel-2.3.2/src/formats/xsfformat.cpp openbabel-2.3.2/src/formats/xtcformat.cpp openbabel-2.3.2/src/formats/xyzformat.cpp openbabel-2.3.2/src/formats/yasaraformat.cpp openbabel-2.3.2/src/formats/zindoformat.cpp openbabel-2.3.2/src/formats/xml/cdxmlformat.cpp openbabel-2.3.2/src/formats/xml/cmlformat.cpp openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp openbabel-2.3.2/src/formats/xml/iconv.h openbabel-2.3.2/src/formats/xml/pubchem.cpp openbabel-2.3.2/src/formats/xml/xml.cpp openbabel-2.3.2/src/formats/xml/xmlformat.cpp openbabel-2.3.2/src/formats/libinchi/CMakeLists.txt openbabel-2.3.2/src/formats/libinchi/ichi_bns.c openbabel-2.3.2/src/formats/libinchi/ichi_io.c openbabel-2.3.2/src/formats/libinchi/ichican2.c openbabel-2.3.2/src/formats/libinchi/ichicano.c openbabel-2.3.2/src/formats/libinchi/ichicans.c openbabel-2.3.2/src/formats/libinchi/ichiisot.c openbabel-2.3.2/src/formats/libinchi/ichilnct.c openbabel-2.3.2/src/formats/libinchi/ichimak2.c openbabel-2.3.2/src/formats/libinchi/ichimake.c openbabel-2.3.2/src/formats/libinchi/ichimap1.c openbabel-2.3.2/src/formats/libinchi/ichimap2.c openbabel-2.3.2/src/formats/libinchi/ichimap4.c openbabel-2.3.2/src/formats/libinchi/ichinorm.c openbabel-2.3.2/src/formats/libinchi/ichiparm.c openbabel-2.3.2/src/formats/libinchi/ichiprt1.c openbabel-2.3.2/src/formats/libinchi/ichiprt2.c openbabel-2.3.2/src/formats/libinchi/ichiprt3.c openbabel-2.3.2/src/formats/libinchi/ichiqueu.c openbabel-2.3.2/src/formats/libinchi/ichiread.c openbabel-2.3.2/src/formats/libinchi/ichiring.c openbabel-2.3.2/src/formats/libinchi/ichirvr1.c openbabel-2.3.2/src/formats/libinchi/ichirvr2.c openbabel-2.3.2/src/formats/libinchi/ichirvr3.c openbabel-2.3.2/src/formats/libinchi/ichirvr4.c openbabel-2.3.2/src/formats/libinchi/ichirvr5.c openbabel-2.3.2/src/formats/libinchi/ichirvr6.c openbabel-2.3.2/src/formats/libinchi/ichirvr7.c openbabel-2.3.2/src/formats/libinchi/ichisort.c openbabel-2.3.2/src/formats/libinchi/ichister.c openbabel-2.3.2/src/formats/libinchi/ichitaut.c openbabel-2.3.2/src/formats/libinchi/ikey_base26.c openbabel-2.3.2/src/formats/libinchi/ikey_dll.c openbabel-2.3.2/src/formats/libinchi/inchi_dll.c openbabel-2.3.2/src/formats/libinchi/inchi_dll_a.c openbabel-2.3.2/src/formats/libinchi/inchi_dll_a2.c openbabel-2.3.2/src/formats/libinchi/inchi_dll_main.c openbabel-2.3.2/src/formats/libinchi/runichi.c openbabel-2.3.2/src/formats/libinchi/sha2.c openbabel-2.3.2/src/formats/libinchi/strutil.c openbabel-2.3.2/src/formats/libinchi/util.c openbabel-2.3.2/src/forcefields/forcefieldgaff.cpp openbabel-2.3.2/src/forcefields/forcefieldgaff.h openbabel-2.3.2/src/forcefields/forcefieldghemical.cpp openbabel-2.3.2/src/forcefields/forcefieldghemical.h openbabel-2.3.2/src/forcefields/forcefieldmm2.cpp openbabel-2.3.2/src/forcefields/forcefieldmm2.h openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp openbabel-2.3.2/src/forcefields/forcefieldmmff94.h openbabel-2.3.2/src/forcefields/forcefielduff.cpp openbabel-2.3.2/src/forcefields/forcefielduff.h openbabel-2.3.2/src/fingerprints/finger2.cpp openbabel-2.3.2/src/fingerprints/finger3.cpp openbabel-2.3.2/src/descriptors/cansmidescriptor.cpp openbabel-2.3.2/src/descriptors/cmpdfilter.cpp openbabel-2.3.2/src/descriptors/filters.cpp openbabel-2.3.2/src/descriptors/groupcontrib.cpp openbabel-2.3.2/src/descriptors/inchidescriptor.cpp openbabel-2.3.2/src/descriptors/smartsdescriptors.cpp openbabel-2.3.2/src/depict/asciipainter.cpp openbabel-2.3.2/src/depict/cairopainter.cpp openbabel-2.3.2/src/depict/depict.cpp openbabel-2.3.2/src/depict/svgpainter.cpp openbabel-2.3.2/src/charges/eem.cpp openbabel-2.3.2/src/charges/gasteiger.cpp openbabel-2.3.2/src/charges/mmff94.cpp openbabel-2.3.2/src/charges/none.cpp openbabel-2.3.2/src/charges/qeq.cpp openbabel-2.3.2/src/charges/qeq.h openbabel-2.3.2/src/charges/qtpie.cpp openbabel-2.3.2/src/charges/qtpie.h openbabel-2.3.2/scripts/CMakeLists.txt openbabel-2.3.2/scripts/csharp/ openbabel-2.3.2/scripts/java/ openbabel-2.3.2/scripts/openbabel-csharp.i openbabel-2.3.2/scripts/openbabel-java.i openbabel-2.3.2/scripts/openbabel-mono.i openbabel-2.3.2/scripts/openbabel-perl.i openbabel-2.3.2/scripts/openbabel-python.i openbabel-2.3.2/scripts/openbabel-ruby.i openbabel-2.3.2/scripts/perl/ openbabel-2.3.2/scripts/python/ 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openbabel-2.3.2/scripts/perl/t/residue.t openbabel-2.3.2/scripts/perl/inc/Devel/ openbabel-2.3.2/scripts/perl/inc/Devel/CheckLib.pm openbabel-2.3.2/scripts/perl/examples/example.pl openbabel-2.3.2/scripts/java/OBTest.class openbabel-2.3.2/scripts/java/OBTest.java openbabel-2.3.2/scripts/java/openbabel-java.cpp openbabel-2.3.2/scripts/java/openbabel.jar openbabel-2.3.2/scripts/java/README openbabel-2.3.2/scripts/csharp/OBDotNet.dll openbabel-2.3.2/scripts/csharp/openbabel-csharp.cpp openbabel-2.3.2/include/chemdrawcdx.h openbabel-2.3.2/include/CMakeLists.txt openbabel-2.3.2/include/iconv.h openbabel-2.3.2/include/inchi/ openbabel-2.3.2/include/inchi_api.h openbabel-2.3.2/include/libxml/ openbabel-2.3.2/include/OB-BGL/ openbabel-2.3.2/include/openbabel/ openbabel-2.3.2/include/RDKitConv.h openbabel-2.3.2/include/zconf.h openbabel-2.3.2/include/zlib.h openbabel-2.3.2/include/openbabel/alias.h openbabel-2.3.2/include/openbabel/atom.h openbabel-2.3.2/include/openbabel/atomclass.h openbabel-2.3.2/include/openbabel/base.h openbabel-2.3.2/include/openbabel/bitvec.h openbabel-2.3.2/include/openbabel/bond.h openbabel-2.3.2/include/openbabel/bondtyper.h openbabel-2.3.2/include/openbabel/builder.h openbabel-2.3.2/include/openbabel/canon.h openbabel-2.3.2/include/openbabel/chains.h openbabel-2.3.2/include/openbabel/chargemodel.h openbabel-2.3.2/include/openbabel/chiral.h openbabel-2.3.2/include/openbabel/conformersearch.h openbabel-2.3.2/include/openbabel/data.h openbabel-2.3.2/include/openbabel/depict/ openbabel-2.3.2/include/openbabel/descriptor.h openbabel-2.3.2/include/openbabel/dlhandler.h openbabel-2.3.2/include/openbabel/fingerprint.h openbabel-2.3.2/include/openbabel/forcefield.h openbabel-2.3.2/include/openbabel/format.h openbabel-2.3.2/include/openbabel/generic.h openbabel-2.3.2/include/openbabel/graphsym.h openbabel-2.3.2/include/openbabel/grid.h openbabel-2.3.2/include/openbabel/griddata.h openbabel-2.3.2/include/openbabel/groupcontrib.h 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openbabel-2.3.2/doc/API/html/search/classes_78.html openbabel-2.3.2/doc/API/html/search/close.png openbabel-2.3.2/doc/API/html/search/defines_61.html openbabel-2.3.2/doc/API/html/search/defines_62.html openbabel-2.3.2/doc/API/html/search/defines_63.html openbabel-2.3.2/doc/API/html/search/defines_64.html openbabel-2.3.2/doc/API/html/search/defines_65.html openbabel-2.3.2/doc/API/html/search/defines_66.html openbabel-2.3.2/doc/API/html/search/defines_68.html openbabel-2.3.2/doc/API/html/search/defines_69.html openbabel-2.3.2/doc/API/html/search/defines_6b.html openbabel-2.3.2/doc/API/html/search/defines_6c.html openbabel-2.3.2/doc/API/html/search/defines_6d.html openbabel-2.3.2/doc/API/html/search/defines_6e.html openbabel-2.3.2/doc/API/html/search/defines_6f.html openbabel-2.3.2/doc/API/html/search/defines_70.html openbabel-2.3.2/doc/API/html/search/defines_72.html openbabel-2.3.2/doc/API/html/search/defines_73.html openbabel-2.3.2/doc/API/html/search/defines_74.html openbabel-2.3.2/doc/API/html/search/defines_75.html openbabel-2.3.2/doc/API/html/search/defines_76.html openbabel-2.3.2/doc/API/html/search/defines_77.html openbabel-2.3.2/doc/API/html/search/defines_7a.html openbabel-2.3.2/doc/API/html/search/enums_61.html openbabel-2.3.2/doc/API/html/search/enums_62.html openbabel-2.3.2/doc/API/html/search/enums_63.html openbabel-2.3.2/doc/API/html/search/enums_64.html openbabel-2.3.2/doc/API/html/search/enums_65.html openbabel-2.3.2/doc/API/html/search/enums_66.html openbabel-2.3.2/doc/API/html/search/enums_6c.html openbabel-2.3.2/doc/API/html/search/enums_6d.html openbabel-2.3.2/doc/API/html/search/enums_6e.html openbabel-2.3.2/doc/API/html/search/enums_6f.html openbabel-2.3.2/doc/API/html/search/enums_70.html openbabel-2.3.2/doc/API/html/search/enums_72.html openbabel-2.3.2/doc/API/html/search/enums_73.html openbabel-2.3.2/doc/API/html/search/enums_74.html openbabel-2.3.2/doc/API/html/search/enums_75.html 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openbabel-2.3.2/doc/API/html/search/files_71.html openbabel-2.3.2/doc/API/html/search/files_72.html openbabel-2.3.2/doc/API/html/search/files_73.html openbabel-2.3.2/doc/API/html/search/files_74.html openbabel-2.3.2/doc/API/html/search/files_76.html openbabel-2.3.2/doc/API/html/search/files_78.html openbabel-2.3.2/doc/API/html/search/functions_5f.html openbabel-2.3.2/doc/API/html/search/functions_61.html openbabel-2.3.2/doc/API/html/search/functions_62.html openbabel-2.3.2/doc/API/html/search/functions_63.html openbabel-2.3.2/doc/API/html/search/functions_64.html openbabel-2.3.2/doc/API/html/search/functions_65.html openbabel-2.3.2/doc/API/html/search/functions_66.html openbabel-2.3.2/doc/API/html/search/functions_67.html openbabel-2.3.2/doc/API/html/search/functions_68.html openbabel-2.3.2/doc/API/html/search/functions_69.html openbabel-2.3.2/doc/API/html/search/functions_6a.html openbabel-2.3.2/doc/API/html/search/functions_6b.html 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openbabel-2.3.2/doc/API/html/search/namespaces_6f.html openbabel-2.3.2/doc/API/html/search/namespaces_73.html openbabel-2.3.2/doc/API/html/search/namespaces_74.html openbabel-2.3.2/doc/API/html/search/nomatches.html openbabel-2.3.2/doc/API/html/search/related_6f.html openbabel-2.3.2/doc/API/html/search/search.css openbabel-2.3.2/doc/API/html/search/search.js openbabel-2.3.2/doc/API/html/search/search_l.png openbabel-2.3.2/doc/API/html/search/search_m.png openbabel-2.3.2/doc/API/html/search/search_r.png openbabel-2.3.2/doc/API/html/search/typedefs_61.html openbabel-2.3.2/doc/API/html/search/typedefs_62.html openbabel-2.3.2/doc/API/html/search/typedefs_63.html openbabel-2.3.2/doc/API/html/search/typedefs_64.html openbabel-2.3.2/doc/API/html/search/typedefs_65.html openbabel-2.3.2/doc/API/html/search/typedefs_66.html openbabel-2.3.2/doc/API/html/search/typedefs_69.html openbabel-2.3.2/doc/API/html/search/typedefs_6b.html openbabel-2.3.2/doc/API/html/search/typedefs_6c.html openbabel-2.3.2/doc/API/html/search/typedefs_6d.html openbabel-2.3.2/doc/API/html/search/typedefs_6e.html openbabel-2.3.2/doc/API/html/search/typedefs_6f.html openbabel-2.3.2/doc/API/html/search/typedefs_70.html openbabel-2.3.2/doc/API/html/search/typedefs_72.html openbabel-2.3.2/doc/API/html/search/typedefs_73.html openbabel-2.3.2/doc/API/html/search/typedefs_74.html openbabel-2.3.2/doc/API/html/search/typedefs_76.html openbabel-2.3.2/doc/API/html/search/typedefs_77.html openbabel-2.3.2/doc/API/html/search/variables_5f.html openbabel-2.3.2/doc/API/html/search/variables_61.html openbabel-2.3.2/doc/API/html/search/variables_62.html openbabel-2.3.2/doc/API/html/search/variables_63.html openbabel-2.3.2/doc/API/html/search/variables_64.html openbabel-2.3.2/doc/API/html/search/variables_65.html openbabel-2.3.2/doc/API/html/search/variables_66.html openbabel-2.3.2/doc/API/html/search/variables_67.html openbabel-2.3.2/doc/API/html/search/variables_68.html openbabel-2.3.2/doc/API/html/search/variables_69.html openbabel-2.3.2/doc/API/html/search/variables_6c.html openbabel-2.3.2/doc/API/html/search/variables_6d.html openbabel-2.3.2/doc/API/html/search/variables_6e.html openbabel-2.3.2/doc/API/html/search/variables_6f.html openbabel-2.3.2/doc/API/html/search/variables_70.html openbabel-2.3.2/doc/API/html/search/variables_71.html openbabel-2.3.2/doc/API/html/search/variables_72.html openbabel-2.3.2/doc/API/html/search/variables_73.html openbabel-2.3.2/doc/API/html/search/variables_74.html openbabel-2.3.2/doc/API/html/search/variables_76.html openbabel-2.3.2/doc/API/html/search/variables_77.html openbabel-2.3.2/doc/API/html/search/variables_78.html openbabel-2.3.2/doc/API/html/search/variables_79.html openbabel-2.3.2/doc/API/html/search/variables_7a.html openbabel-2.3.2/data/aromatic.h openbabel-2.3.2/data/aromatic.txt openbabel-2.3.2/data/atomtyp.h openbabel-2.3.2/data/atomtyp.txt openbabel-2.3.2/data/babel_povray3.inc openbabel-2.3.2/data/bin2hex.pl openbabel-2.3.2/data/bondtyp.h openbabel-2.3.2/data/bondtyp.txt openbabel-2.3.2/data/CMakeLists.txt openbabel-2.3.2/data/element.h openbabel-2.3.2/data/element.txt openbabel-2.3.2/data/fragments.txt openbabel-2.3.2/data/gaff.dat openbabel-2.3.2/data/gaff.prm openbabel-2.3.2/data/genheaders.sh openbabel-2.3.2/data/ghemical.prm openbabel-2.3.2/data/isotope-small.txt openbabel-2.3.2/data/isotope.h openbabel-2.3.2/data/isotope.txt openbabel-2.3.2/data/logp.txt openbabel-2.3.2/data/MACCS.txt openbabel-2.3.2/data/mm2.prm openbabel-2.3.2/data/mmff94.ff openbabel-2.3.2/data/mmff94s.ff openbabel-2.3.2/data/mmffang.par openbabel-2.3.2/data/mmffbndk.par openbabel-2.3.2/data/mmffbond.par openbabel-2.3.2/data/mmffchg.par openbabel-2.3.2/data/mmffdef.par openbabel-2.3.2/data/mmffdfsb.par openbabel-2.3.2/data/mmffoop.par openbabel-2.3.2/data/mmffpbci.par openbabel-2.3.2/data/mmffprop.par openbabel-2.3.2/data/mmffs_oop.par cd openbabel-2.3.2/ mkdir build mkdir: cannot create directory `build': File exists cd build/ cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install .. openbabel-2.3.2/data/mmffs_tor.par openbabel-2.3.2/data/mmffstbn.par openbabel-2.3.2/data/mmfftor.par openbabel-2.3.2/data/mmffvdw.par openbabel-2.3.2/data/mpC.txt openbabel-2.3.2/data/mr.txt openbabel-2.3.2/data/patterns.txt openbabel-2.3.2/data/phmodel.txt openbabel-2.3.2/data/phmodeldata.h openbabel-2.3.2/data/plugindefines.txt openbabel-2.3.2/data/psa.txt openbabel-2.3.2/data/qeq.txt openbabel-2.3.2/data/resdata.h openbabel-2.3.2/data/resdata.txt openbabel-2.3.2/data/ringtyp.txt openbabel-2.3.2/data/SMARTS_InteLigand.txt openbabel-2.3.2/data/space-groups.txt openbabel-2.3.2/data/space-groups.xsl openbabel-2.3.2/data/splash.png openbabel-2.3.2/data/superatom.txt openbabel-2.3.2/data/svgformat.script openbabel-2.3.2/data/templates.sdf openbabel-2.3.2/data/torlib.h openbabel-2.3.2/data/torlib.txt openbabel-2.3.2/data/types.h openbabel-2.3.2/data/types.txt openbabel-2.3.2/data/UFF.prm openbabel-2.3.2/cmake/modules/ openbabel-2.3.2/cmake/modules/FindCairo.cmake openbabel-2.3.2/cmake/modules/FindEigen2.cmake openbabel-2.3.2/cmake/modules/FindEigen3.cmake openbabel-2.3.2/cmake/modules/FindInchi.cmake openbabel-2.3.2/cmake/modules/MacroEnsureVersion.cmake openbabel-2.3.2/cmake/modules/UsePythonTest.cmake -- Using included inchi library. -- Could NOT find wxWidgets (missing: wxWidgets_FOUND) -- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0") -- Could NOT find Eigen2 (missing: EIGEN2_INCLUDE_DIR EIGEN2_VERSION_OK) (Required is at least version "2.0.0") -- Cairo found. PNG output will be supported. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at test/CMakeLists.txt:171 (include): Syntax Warning in cmake code at /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39 Argument not separated from preceding token by whitespace. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. -- Attempting to build the GUI -- wxWidgets not found => GUI will not be built CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE): Policy CMP0053 is not set: Simplify variable reference and escape sequence evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For input: ' SET(ENV{PYTHONPATH} ${pyenv}) SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} ${ob_libdir}) SET(ENV{BABEL_DATADIR} ${ob_datadir}) MESSAGE(\"${pyenv}\") EXECUTE_PROCESS( COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn} #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' the old evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py #WORKING_DIRECTORY RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' but the new evaluation rules produce: ' SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH}) SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib) SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data) MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib") EXECUTE_PROCESS( COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py #WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@ RESULT_VARIABLE import_res OUTPUT_VARIABLE import_output ERROR_VARIABLE import_output ) # Pass the output back to ctest IF(import_output) MESSAGE(' Using the old result for compatibility since the policy is not set. Call Stack (most recent call first): test/CMakeLists.txt:182 (ADD_PYTHON_TEST) This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done nice make -j8 -- Build files have been written to: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build [ 28%] Built target inchi [ 33%] Built target openbabel [ 35%] [ 35%] Built target CSRformat Built target plugin_descriptors [ 37%] [ 37%] [ 37%] [ 37%] Built target plugin_charges Built target APIInterface Built target MCDLformat Built target plugin_fingerprints [ 43%] Built target plugin_ops [ 44%] [ 44%] Built target PQSformat Built target acrformat [ 45%] Built target MNAformat [ 45%] [ 46%] [ 46%] Built target adfformat Built target acesformat Built target abinitformat [ 47%] Built target alchemyformat [ 48%] [ 48%] Built target amberformat [ 49%] Built target balstformat Built target bgfformat [ 49%] [ 49%] [ 49%] Built target boxformat Built target cacaoformat Built target asciiformat [ 50%] Built target cacheformat [ 50%] Built target castepformat [ 50%] Built target carformat [ 50%] [ 50%] Built target cccformat [ 51%] Built target chem3dformat [ 52%] Built target cdxmlformat [ 52%] Built target chemdrawcdx Built target chemdrawct [ 52%] [ 52%] Built target plugin_forcefields Built target chemkinformat [ 54%] [ 54%] Built target cmlformat [ 55%] Built target cifformat [ 55%] Built target copyformat [ 55%] Built target crkformat Built target cmlreactformat [ 55%] Built target chemtoolformat [ 56%] Built target cssrformat [ 56%] Built target crystal09format [ 56%] [ 56%] Built target dlpolyformat Built target fastaformat [ 57%] [ 57%] [ 57%] Built target fastsearchformat [ 57%] Built target dmolformat Built target fchkformat Built target featformat [ 58%] Built target fhformat [ 58%] Built target fhiaimsformat [ 59%] [ 59%] Built target fingerprintformat Built target freefracformat [ 60%] Built target gamessukformat [ 60%] [ 60%] [ 60%] Built target gaussformat Built target gamessformat Built target gausscubeformat [ 61%] Built target gausszmatformat [ 61%] Built target fpsformat [ 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target pqrformat Built target qchemformat [ 72%] Built target posformat [ 72%] [ 72%] Built target reportformat [ 72%] [ 72%] Built target rsmiformat Built target rxnformat Built target pwscfformat [ 73%] [ 73%] Built target smilesformat Built target shelxformat [ 74%] [ 74%] Built target textformat Built target svgformat [ 74%] [ 75%] Built target turbomoleformat [ 75%] [ 75%] Built target titleformat Built target tinkerformat Built target unichemformat [ 76%] Built target xedformat [ 76%] [ 76%] Built target thermoformat Built target viewmolformat [ 76%] [ 76%] Built target xsfformat [ 77%] [ 78%] [ 78%] Built target xyzformat [ 78%] Built target xmlformat Built target xtcformat Built target vaspformat Built target yasaraformat [ 79%] [ 79%] Built target zindoformat Built target babel [ 79%] Built target obabel [ 80%] [ 80%] [ 80%] [ 80%] Built target obconformer Built target obchiral Built target obfit Built target obenergy [ 81%] [ 81%] [ 81%] Built target obgrep Built target obgen Built target obminimize [ 83%] [ 83%] [ 83%] [ 83%] Built target obrotamer Built target obrotate Built target obspectrophore Built target obprop [ 85%] [ 85%] [ 85%] Built target roundtrip Built target test_aromatest Built target test_atom make install [ 85%] Built target obprobe [ 86%] [ 86%] Built target test_bond Built target test_builder [ 87%] [ 87%] Built target test_canonstable Built target test_canonconsistent [ 87%] [ 87%] [ 87%] Built target test_cansmi Built target test_charge-gasteiger Built target test_automorphism [ 87%] Built target test_charge-mmff94 [ 89%] [ 89%] Built target test_cistrans [ 89%] [ 89%] Built target test_conversion [ 89%] Built target test_ffghemical [ 89%] [ 90%] Built target test_ffmmff94 Built target test_formalcharge Built target test_datatest Built target test_ffuff [ 90%] [ 90%] [ 91%] Built target test_format Built target test_ffgaff Built target test_formula [ 91%] [ 91%] [ 92%] Built target test_implicitH Built target test_internalcoord Built target test_inchiwrite [ 92%] Built target test_graphsym [ 93%] [ 93%] Built target test_isomorphism Built target test_invalidsmiles [ 93%] [ 94%] Built target test_iterators [ 94%] Built target test_logp_psa Built target test_math [ 94%] [ 95%] [ 95%] Built target test_invalidsmarts Built target test_mol Built target test_lssr [ 95%] [ 95%] Built target test_residue Built target test_phmodel [ 96%] [ 96%] [ 96%] Built target test_ringtest Built target test_shuffle Built target test_rotor [ 96%] [ 96%] Built target test_smiles Built target test_smartstest [ 97%] [ 98%] Built target test_smartsparse Built target test_smilesmatch [ 98%] Built target test_spectrophore [ 98%] Built target test_squareplanar [ 99%] [ 99%] [ 99%] Built target test_stereoperception Built target test_tetranonplanar Built target test_tetrahedral [100%] [100%] Built target test_tetraplanar Built target test_uniqueid [100%] Built target test_unitcell [100%] Built target test_stereo [ 20%] Built target openbabel [ 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/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obfit -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgen -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obminimize -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprobe -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprop -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotamer -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotate -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obspectrophore -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgrep -- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/roundtrip export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib export CC=cc export CXX=CC export FC=ftn # install plplot library cd $INSTDIR git clone git://git.code.sf.net/p/plplot/plplot plplot.git fatal: destination path 'plplot.git' already exists and is not an empty directory. cd plplot.git/ mkdir build mkdir: cannot create directory `build': File exists cd build cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install .. -- CMake version = 3.1.3 -- CMAKE_SYSTEM_NAME = Linux -- SH_EXECUTABLE = /bin/bash -- Checking whether system has ANSI C header files -- ANSI C header files - found -- SWIG_VERSION = 3.0.7 -- WARNING: Perl module XML::DOM not found -- Looking for pkg-config - found -- cxx_compiler_library_pathname_list = /opt/cray/atp/2.0.4/libApp/libAtpSigHandler.so;/opt/cray/atp/2.0.4/libApp/libAtpSigHCommData.a;/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/librca.so;/usr/lib64/libz.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3.so;/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib/libsci_gnu_49_mpi.so;/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib/libsci_gnu_49.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpich_gnu_49.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpichcxx_gnu_49.so;/opt/gcc/4.9.3/snos/lib64/libgfortran.so;/opt/gcc/4.9.3/snos/lib64/libquadmath.so;/usr/lib64/libm.so;/usr/lib64/libpthread.so;/opt/gcc/4.9.3/snos/lib64/libstdc++.so;/usr/lib64/libm.so;/usr/lib64/libc.so -- X11_FOUND = 1 -- X11_INCLUDE_DIR = /usr/include -- X11_COMPILE_FLAGS = -I/usr/include -- X11_LIBRARIES = /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so -- NOTICE: Found: /opt/cray/craype/2.5.8/bin/ftn -- PYTHON_VERSION = 2.6.9 -- Building Python binding with plsmem() support -- Start determining consistent system data for Tcl and friends -- Looking for Tcl - found -- TCL_INCLUDE_PATH = /usr/include -- TCL_LIBRARY = /usr/lib64/libtcl8.5.so -- TCL_STUB_LIBRARY = /usr/lib64/libtclstub8.5.a -- TCL_LIBRARY_PATH = /usr/lib64 -- Looking for tclsh - found -- TCL_TCLSH = /usr/bin/tclsh -- PLPLOT_TCL_VERSION = 8.5.5 -- WARNING: Because Tk is disabled must disable Itk as well -- Finished determining consistent system data for Tcl and friends -- Check for NaN awareness in C compiler -- Check for NaN awareness in C compiler - found -- checking for module 'pango' -- found pango, version 1.26.2 -- checking for module 'pangoft2' -- found pangoft2, version 1.26.2 -- Found LTDL: /usr/lib64/libltdl.so -- LTDL_INCLUDE_DIR = /usr/include -- LTDL_LIBRARY_DIR = /usr/lib64 -- LTDL_LIBRARIES = /usr/lib64/libltdl.so -- checking for module 'pangocairo' -- found pangocairo, version 1.26.2 -- WARNING: ENABLE_wxwidgets is OFF so setting all wxwidgets devices to OFF. -- WARNING: ENABLE_ocaml is OFF so disabling Plcairo module and lablgtk2 support -- WARNING: validate target will not be available to check for syntax issues in the PLplot DocBook documentation because onsgmls (or env) was not found. pc_libplplot_LINK_FLAGS = /usr/lib64/libltdl.so;/usr/lib64/libm.so;-lcsirocsa;-lqsastime -- WARNING: Perl modules XML::Parser and/or XML::DOM not available so cannot check that swig_documentation.i is up to date. -- ENABLE_itcl: OFF -- Itcl libraries: plplot;/usr/lib64/libtcl8.5.so -- TEST_ENVIRONMENT = EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/examples SRC_EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/examples OUTPUT_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/ctest_examples_output_dir VC_CTEST_DIRECTORY= -- Determine compile and link flags for extXdrawable_demo -- checking for module 'gtk+-x11-2.0' -- found gtk+-x11-2.0, version 2.18.9 -- Determine compile and link flags for ext-cairo-test -- checking for module 'cairo' -- found cairo, version 1.8.8 Summary of CMake build system results for PLplot Install location variables which can be set by the user: CMAKE_INSTALL_PREFIX: /u/system/bwjenkins/rmg-spp/plplot.git/install CMAKE_INSTALL_EXEC_PREFIX /u/system/bwjenkins/rmg-spp/plplot.git/install CMAKE_INSTALL_BINDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/bin CMAKE_INSTALL_DATADIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share CMAKE_INSTALL_LIBDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib CMAKE_INSTALL_INCLUDEDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/include CMAKE_INSTALL_INFODIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/info CMAKE_INSTALL_MANDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man Derived install location variables: DATA_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0 LIB_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib INCLUDE_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot BIN_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/bin TCL_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/tcl ADA_INCLUDE_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/ada/adainclude/plplotada ADA_LIB_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/ada/adalib/plplotada PYTHON_INSTDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib64/python2.6/site-packages DRV_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/plplot5.12.0/drivers DOC_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot MAN_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man INFO_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/info Other important CMake variables: CMAKE_SYSTEM_NAME: Linux UNIX: 1 WIN32: APPLE: MSVC: (MSVC_VERSION: ) MINGW: MSYS: CYGWIN: BORLAND: WATCOM: SWIG_FOUND: 1 PERL_FOUND: TRUE X11_FOUND: 1 CMAKE_BUILD_TYPE: CMAKE_C_COMPILER CMAKE_C_FLAGS: /opt/cray/craype/2.5.8/bin/cc CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS: /opt/cray/craype/2.5.8/bin/CC CMAKE_Fortran_COMPILER CMAKE_Fortran_FLAGS: /opt/cray/craype/2.5.8/bin/ftn Target Fortran: PYTHON_EXECUTABLE: /usr/bin/python PYTHON_INCLUDE_PATH: /usr/include/python2.6 PYTHON_LIBRARIES: /usr/lib64/libpython2.6.so NUMPY_INCLUDE_PATH: /usr/lib64/python2.6/site-packages/numpy/core/include/numpy ENABLE_DYNDRIVERS: ON DRIVERS_LIST: cairo;mem;null;ps;svg;xfig;xwin DEVICES_LIST: memcairo;extcairo;pdfcairo;pngcairo;pscairo;epscairo;svgcairo;xcairo;mem;null;ps;svg;xfig;xwin Library options: BUILD_SHARED_LIBS: ON PL_DOUBLE: ON Optional libraries: PL_HAVE_QHULL: OFF WITH_CSA: ON PL_HAVE_FREETYPE: PL_HAVE_PTHREAD: ON HAVE_AGG: HAVE_SHAPELIB: OFF Language Bindings: ENABLE_ada: OFF ENABLE_cxx: ON ENABLE_d: OFF ENABLE_f95: ON ENABLE_java: ON ENABLE_lua: OFF ENABLE_ocaml: OFF ENABLE_octave: OFF ENABLE_pdl: OFF ENABLE_python: ON ENABLE_qt: OFF ENABLE_pyqt4: OFF ENABLE_pyqt5: OFF ENABLE_tcl: ON ENABLE_itcl: OFF ENABLE_tk: OFF ENABLE_itk: OFF ENABLE_wxwidgets: OFF -- Configuring done -- Generating done make -- Build files have been written to: /u/system/bwjenkins/rmg-spp/plplot.git/build [ 0%] Built target csirocsa [ 1%] Built target deltaT-gen [ 1%] Built target deltaT.h_built [ 2%] Built target tai-utc-gen [ 2%] Built target tai-utc.h_built [ 2%] Built target qsastime [ 2%] Built target plhershey-unicode-gen [ 3%] Built target plhershey-unicode.h_built [ 13%] Built target plplot [ 13%] Built target concatenate_pkgIndex.tcl [ 13%] Built target plplotcxx [ 14%] Built target plplotf95 [ 14%] Built target plplot.tcl_target [ 15%] Built target tclmatrix [ 15%] Built target plplottcltk [ 16%] Built target plplottcltk_Main [ 16%] Built target pltcl [ 16%] Built target tclIndex_tcl [ 16%] Built target _plplotcmodule [ 16%] Built target _plplotcmodule_fixed [ 17%] Built target plplotjavac_wrap [ 21%] Built target plplot_core [ 22%] Built target cairo [ 22%] Built target mem [ 23%] Built target null [ 24%] Built target ps [ 24%] Built target svg [ 24%] Built target test-drv-info [ 25%] Built target xwin [ 25%] Built target test_xwin_dyndriver [ 26%] Built target test_cairo_dyndriver [ 26%] Built target test_mem_dyndriver [ 26%] Built target test_null_dyndriver [ 26%] Built target test_ps_dyndriver [ 28%] Built target test_svg_dyndriver [ 28%] Built target xfig [ 28%] Built target test_xfig_dyndriver [ 28%] Built target test_dyndrivers [ 28%] Built target parity_bit_check [ 28%] Built target pltek [ 28%] Built target workaround_file_generate_bug [ 28%] Built target plf95demolib [ 28%] Built target x33j [ 29%] Built target x00j [ 29%] Built target x01j [ 29%] Built target x02j [ 29%] Built target x03j [ 30%] Built target x04j [ 30%] Built target x05j [ 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Built target x30j [ 38%] Built target x31j [ 47%] Built target plplot_examples [ 57%] Built target plplot_jar [ 78%] Built target tcl_examples [100%] Built target tclIndex_examples_tcl Install the project... -- Install configuration: "" -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ABOUT -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/AUTHORS -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/COPYING.LIB -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ChangeLog.release -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/Copyright -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/FAQ -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/NEWS -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/PROBLEMS -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.release -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.cumulated_release -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.testing -- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libcsirocsa.so.0.0.1 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libcsirocsa.so.0 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libcsirocsa.so -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.csa -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.1st.csa -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/qsastime.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/qsastimedll.h -- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libqsastime.so.0.0.1 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libqsastime.so.0 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libqsastime.so -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/disptab.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/drivers.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/pdf.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/pldebug.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/pldll.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plevent.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plplot.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plplotP.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plstrm.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plxwd.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plConfig.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plDevs.h -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplot.so.14.0.0 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplot.so.14 -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplot.so -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/cmake/plplot/export_plplot.cmake -- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/cmake/plplot/export_plplot-noconfig.cmake -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/cmake/plplot/plplotConfig.cmake -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/pkgconfig/plplot.pc -- Up-to-date: 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/u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x24.tcl -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x25.tcl -- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/pl # install CPU-version of RMG cd $INSTDIR wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz --2018-01-25 10:15:58-- http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz Resolving downloads.sourceforge.net... 216.34.181.59 Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected. HTTP request sent, awaiting response... 302 Found Location: https://superb-sea2.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz [following] --2018-01-25 10:15:58-- https://superb-sea2.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz Resolving superb-sea2.dl.sourceforge.net... 209.160.57.180 Connecting to superb-sea2.dl.sourceforge.net|209.160.57.180|:443... connected. 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.......... .......... .......... .......... .......... 14% 85.6M 8s 6200K .......... .......... .......... .......... .......... 15% 84.6M 7s 6250K .......... .......... .......... .......... .......... 15% 86.6M 7s 6300K .......... .......... .......... .......... .......... 15% 83.6M 7s 6350K .......... .......... .......... .......... .......... 15% 61.5M 7s 6400K .......... .......... .......... .......... .......... 15% 87.4M 7s 6450K .......... .......... .......... .......... .......... 15% 89.2M 7s 6500K .......... .......... .......... .......... .......... 15% 84.2M 7s 6550K .......... .......... .......... .......... .......... 15% 89.0M 7s 6600K .......... .......... .......... .......... .......... 16% 81.2M 7s 6650K .......... .......... .......... .......... .......... 16% 89.0M 7s 6700K .......... .......... .......... .......... .......... 16% 86.8M 7s 6750K .......... .......... .......... .......... .......... 16% 75.4M 7s 6800K .......... .......... .......... .......... .......... 16% 1.63M 7s 6850K .......... .......... .......... .......... .......... 16% 3.48M 7s 6900K .......... .......... .......... .......... .......... 16% 78.0M 7s 6950K .......... .......... .......... .......... .......... 16% 46.8M 7s 7000K .......... .......... .......... .......... .......... 17% 83.9M 7s 7050K .......... .......... .......... .......... .......... 17% 75.7M 7s 7100K .......... .......... .......... .......... .......... 17% 81.7M 7s 7150K .......... .......... .......... .......... .......... 17% 65.4M 7s 7200K .......... .......... .......... .......... .......... 17% 87.2M 7s 7250K .......... .......... .......... .......... .......... 17% 80.0M 6s 7300K .......... .......... .......... .......... .......... 17% 83.7M 6s 7350K .......... .......... .......... .......... .......... 17% 87.0M 6s 7400K .......... .......... .......... .......... .......... 18% 86.8M 6s 7450K .......... .......... .......... .......... .......... 18% 87.5M 6s 7500K .......... .......... .......... .......... .......... 18% 80.6M 6s 7550K .......... .......... .......... .......... .......... 18% 68.1M 6s 7600K .......... .......... .......... .......... .......... 18% 88.3M 6s 7650K .......... .......... .......... .......... .......... 18% 86.3M 6s 7700K .......... .......... .......... .......... .......... 18% 84.6M 6s 7750K .......... .......... .......... .......... .......... 18% 96.0M 6s 7800K .......... .......... .......... .......... .......... 18% 92.5M 6s 7850K .......... .......... .......... .......... .......... 19% 89.8M 6s 7900K .......... .......... .......... .......... .......... 19% 95.2M 6s 7950K .......... .......... .......... .......... .......... 19% 1.50M 6s 8000K .......... .......... .......... .......... .......... 19% 4.85M 6s 8050K .......... .......... .......... .......... .......... 19% 88.7M 6s 8100K .......... .......... .......... .......... .......... 19% 57.6M 6s 8150K .......... .......... .......... .......... .......... 19% 70.3M 6s 8200K .......... .......... .......... .......... .......... 19% 79.2M 6s 8250K .......... .......... .......... .......... .......... 20% 81.6M 6s 8300K .......... .......... .......... .......... .......... 20% 86.9M 6s 8350K .......... .......... .......... .......... .......... 20% 64.8M 6s 8400K .......... .......... .......... .......... .......... 20% 92.9M 6s 8450K .......... .......... .......... .......... .......... 20% 79.0M 6s 8500K .......... .......... .......... .......... .......... 20% 81.6M 6s 8550K .......... .......... .......... .......... .......... 20% 86.8M 5s 8600K .......... .......... .......... .......... .......... 20% 85.5M 5s 8650K .......... .......... .......... .......... .......... 21% 87.8M 5s 8700K .......... .......... .......... .......... .......... 21% 84.5M 5s 8750K .......... .......... .......... .......... .......... 21% 60.9M 5s 8800K .......... .......... .......... .......... .......... 21% 81.0M 5s 8850K .......... .......... .......... .......... .......... 21% 84.9M 5s 8900K .......... .......... .......... .......... .......... 21% 87.8M 5s 8950K .......... .......... .......... .......... .......... 21% 84.3M 5s 9000K .......... .......... .......... .......... .......... 21% 77.6M 5s 9050K .......... .......... .......... .......... .......... 21% 93.4M 5s 9100K .......... .......... .......... .......... .......... 22% 97.5M 5s 9150K .......... .......... .......... .......... .......... 22% 72.0M 5s 9200K .......... .......... .......... .......... .......... 22% 1.75M 5s 9250K .......... .......... .......... .......... .......... 22% 40.1M 5s 9300K .......... .......... .......... .......... .......... 22% 4.07M 5s 9350K .......... .......... .......... .......... .......... 22% 85.4M 5s 9400K .......... .......... .......... .......... .......... 22% 85.1M 5s 9450K .......... .......... .......... .......... .......... 22% 83.2M 5s 9500K .......... .......... .......... .......... .......... 23% 21.1M 5s 9550K .......... .......... .......... .......... .......... 23% 64.3M 5s 9600K .......... .......... .......... .......... .......... 23% 81.0M 5s 9650K .......... .......... .......... .......... .......... 23% 75.5M 5s 9700K .......... .......... .......... .......... .......... 23% 57.1M 5s 9750K .......... .......... .......... .......... .......... 23% 87.8M 5s 9800K .......... .......... .......... .......... .......... 23% 85.9M 5s 9850K .......... .......... .......... .......... .......... 23% 79.4M 5s 9900K .......... .......... .......... .......... .......... 24% 82.5M 5s 9950K .......... .......... .......... .......... .......... 24% 63.7M 5s 10000K .......... .......... .......... .......... .......... 24% 83.7M 5s 10050K .......... .......... .......... .......... .......... 24% 87.0M 5s 10100K .......... .......... .......... .......... .......... 24% 79.3M 5s 10150K .......... .......... .......... .......... .......... 24% 85.0M 5s 10200K .......... .......... .......... .......... .......... 24% 86.0M 5s 10250K .......... .......... .......... .......... .......... 24% 84.6M 5s 10300K .......... .......... .......... .......... .......... 25% 89.7M 4s 10350K .......... .......... .......... .......... .......... 25% 69.7M 4s 10400K .......... .......... .......... .......... .......... 25% 95.4M 4s 10450K .......... .......... .......... .......... .......... 25% 91.9M 4s 10500K .......... .......... .......... .......... .......... 25% 92.5M 4s 10550K .......... .......... .......... .......... .......... 25% 96.6M 4s 10600K .......... .......... .......... .......... .......... 25% 98.1M 4s 10650K .......... .......... .......... .......... .......... 25% 89.0M 4s 10700K .......... .......... .......... .......... .......... 25% 92.6M 4s 10750K .......... .......... .......... .......... .......... 26% 1.67M 4s 10800K .......... .......... .......... .......... .......... 26% 6.39M 4s 10850K .......... .......... .......... .......... .......... 26% 87.2M 4s 10900K .......... .......... .......... .......... .......... 26% 91.3M 4s 10950K .......... .......... .......... .......... .......... 26% 62.9M 4s 11000K .......... .......... .......... .......... .......... 26% 82.9M 4s 11050K .......... .......... .......... .......... .......... 26% 91.3M 4s 11100K .......... .......... .......... .......... .......... 26% 32.0M 4s 11150K .......... .......... .......... .......... .......... 27% 64.3M 4s 11200K .......... .......... .......... .......... .......... 27% 88.1M 4s 11250K .......... .......... .......... .......... .......... 27% 89.3M 4s 11300K .......... .......... .......... .......... .......... 27% 78.8M 4s 11350K .......... .......... .......... .......... .......... 27% 82.7M 4s 11400K .......... .......... .......... .......... .......... 27% 85.1M 4s 11450K .......... .......... .......... .......... .......... 27% 83.9M 4s 11500K .......... .......... .......... .......... .......... 27% 80.9M 4s 11550K .......... .......... .......... .......... .......... 28% 63.8M 4s 11600K .......... .......... .......... .......... .......... 28% 88.7M 4s 11650K .......... .......... .......... .......... .......... 28% 85.9M 4s 11700K .......... .......... .......... .......... .......... 28% 84.5M 4s 11750K .......... .......... .......... .......... .......... 28% 86.7M 4s 11800K .......... .......... .......... .......... .......... 28% 79.7M 4s 11850K .......... .......... .......... .......... .......... 28% 83.3M 4s 11900K .......... .......... .......... .......... .......... 28% 88.0M 4s 11950K .......... .......... .......... .......... .......... 29% 65.0M 4s 12000K .......... .......... .......... .......... .......... 29% 79.7M 4s 12050K .......... .......... .......... .......... .......... 29% 88.6M 4s 12100K .......... .......... .......... .......... .......... 29% 91.0M 4s 12150K .......... .......... .......... .......... .......... 29% 87.5M 4s 12200K .......... .......... .......... .......... .......... 29% 86.5M 4s 12250K .......... .......... .......... .......... .......... 29% 88.5M 4s 12300K .......... .......... .......... .......... .......... 29% 92.7M 4s 12350K .......... .......... .......... .......... .......... 29% 68.9M 4s 12400K .......... .......... .......... .......... .......... 30% 2.07M 4s 12450K .......... .......... .......... .......... .......... 30% 6.97M 4s 12500K .......... .......... .......... .......... .......... 30% 9.36M 4s 12550K .......... .......... .......... .......... .......... 30% 81.2M 4s 12600K .......... .......... .......... .......... .......... 30% 94.6M 4s 12650K .......... .......... .......... .......... .......... 30% 91.5M 4s 12700K .......... .......... .......... .......... .......... 30% 91.4M 4s 12750K .......... .......... .......... .......... .......... 30% 69.7M 4s 12800K .......... .......... .......... .......... .......... 31% 39.0M 4s 12850K .......... .......... .......... .......... .......... 31% 84.9M 4s 12900K .......... .......... .......... .......... .......... 31% 82.4M 4s 12950K .......... .......... .......... .......... .......... 31% 86.5M 3s 13000K .......... .......... .......... .......... .......... 31% 86.5M 3s 13050K .......... .......... .......... .......... .......... 31% 85.6M 3s 13100K .......... .......... .......... .......... .......... 31% 81.9M 3s 13150K .......... .......... .......... .......... .......... 31% 61.7M 3s 13200K .......... .......... .......... .......... .......... 32% 89.5M 3s 13250K .......... .......... .......... .......... .......... 32% 93.5M 3s 13300K .......... .......... .......... .......... .......... 32% 97.1M 3s 13350K .......... .......... .......... .......... .......... 32% 88.2M 3s 13400K .......... .......... .......... .......... .......... 32% 80.9M 3s 13450K .......... .......... .......... .......... .......... 32% 77.5M 3s 13500K .......... .......... .......... .......... .......... 32% 86.4M 3s 13550K .......... .......... .......... .......... .......... 32% 64.1M 3s 13600K .......... .......... .......... .......... .......... 32% 61.0M 3s 13650K .......... .......... .......... .......... .......... 33% 59.4M 3s 13700K .......... .......... .......... .......... .......... 33% 85.7M 3s 13750K .......... .......... .......... .......... .......... 33% 82.5M 3s 13800K .......... .......... .......... .......... .......... 33% 84.9M 3s 13850K .......... .......... .......... .......... .......... 33% 87.1M 3s 13900K .......... .......... .......... .......... .......... 33% 81.4M 3s 13950K .......... .......... .......... .......... .......... 33% 65.1M 3s 14000K .......... .......... .......... .......... .......... 33% 92.9M 3s 14050K .......... .......... .......... .......... .......... 34% 95.1M 3s 14100K .......... .......... .......... .......... .......... 34% 95.6M 3s 14150K .......... .......... .......... .......... .......... 34% 96.9M 3s 14200K .......... .......... .......... .......... .......... 34% 96.1M 3s 14250K .......... .......... .......... .......... .......... 34% 97.3M 3s 14300K .......... .......... .......... .......... .......... 34% 76.9M 3s 14350K .......... .......... .......... .......... .......... 34% 2.03M 3s 14400K .......... .......... .......... .......... .......... 34% 5.41M 3s 14450K .......... .......... .......... .......... .......... 35% 78.3M 3s 14500K .......... .......... .......... .......... .......... 35% 81.6M 3s 14550K .......... .......... .......... .......... .......... 35% 86.5M 3s 14600K .......... .......... .......... .......... .......... 35% 90.8M 3s 14650K .......... .......... .......... .......... .......... 35% 87.8M 3s 14700K .......... .......... .......... .......... .......... 35% 86.6M 3s 14750K .......... .......... .......... .......... .......... 35% 64.5M 3s 14800K .......... .......... .......... .......... .......... 35% 88.6M 3s 14850K .......... .......... .......... .......... .......... 36% 87.9M 3s 14900K .......... .......... .......... .......... .......... 36% 86.0M 3s 14950K .......... .......... .......... .......... .......... 36% 87.6M 3s 15000K .......... .......... .......... .......... .......... 36% 86.6M 3s 15050K .......... .......... .......... .......... .......... 36% 80.3M 3s 15100K .......... .......... .......... .......... .......... 36% 86.4M 3s 15150K .......... .......... .......... .......... .......... 36% 60.3M 3s 15200K .......... .......... .......... .......... .......... 36% 87.6M 3s 15250K .......... .......... .......... .......... .......... 36% 87.2M 3s 15300K .......... .......... .......... .......... .......... 37% 82.0M 3s 15350K .......... .......... .......... .......... .......... 37% 92.0M 3s 15400K .......... .......... .......... .......... .......... 37% 91.8M 3s 15450K .......... .......... .......... .......... .......... 37% 82.7M 3s 15500K .......... 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.......... .......... 39% 89.9M 3s 16200K .......... .......... .......... .......... .......... 39% 95.8M 3s 16250K .......... .......... .......... .......... .......... 39% 100M 3s 16300K .......... .......... .......... .......... .......... 39% 97.1M 3s 16350K .......... .......... .......... .......... .......... 39% 70.3M 3s 16400K .......... .......... .......... .......... .......... 39% 90.6M 3s 16450K .......... .......... .......... .......... .......... 39% 91.9M 3s 16500K .......... .......... .......... .......... .......... 40% 2.55M 3s 16550K .......... .......... .......... .......... .......... 40% 8.49M 3s 16600K .......... .......... .......... .......... .......... 40% 14.8M 3s 16650K .......... .......... .......... .......... .......... 40% 15.0M 3s 16700K .......... .......... .......... .......... .......... 40% 86.8M 3s 16750K .......... .......... .......... .......... .......... 40% 63.9M 3s 16800K .......... .......... .......... .......... .......... 40% 83.5M 2s 16850K .......... .......... .......... .......... .......... 40% 84.5M 2s 16900K .......... .......... .......... .......... .......... 40% 81.5M 2s 16950K .......... .......... .......... .......... .......... 41% 90.8M 2s 17000K .......... .......... .......... .......... .......... 41% 87.5M 2s 17050K .......... .......... .......... .......... .......... 41% 72.3M 2s 17100K .......... .......... .......... .......... .......... 41% 63.3M 2s 17150K .......... .......... .......... .......... .......... 41% 56.0M 2s 17200K .......... .......... .......... .......... .......... 41% 89.0M 2s 17250K .......... .......... .......... .......... .......... 41% 86.9M 2s 17300K .......... .......... .......... .......... .......... 41% 86.8M 2s 17350K .......... .......... .......... .......... .......... 42% 84.4M 2s 17400K .......... .......... .......... .......... .......... 42% 80.0M 2s 17450K .......... .......... .......... .......... .......... 42% 86.4M 2s 17500K .......... .......... .......... .......... .......... 42% 76.4M 2s 17550K .......... .......... .......... .......... .......... 42% 58.0M 2s 17600K .......... .......... .......... .......... .......... 42% 77.1M 2s 17650K .......... .......... .......... .......... .......... 42% 83.9M 2s 17700K .......... .......... .......... .......... .......... 42% 87.9M 2s 17750K .......... .......... .......... .......... .......... 43% 85.9M 2s 17800K .......... .......... .......... .......... .......... 43% 87.7M 2s 17850K .......... .......... .......... .......... .......... 43% 87.1M 2s 17900K .......... .......... .......... .......... .......... 43% 76.8M 2s 17950K .......... .......... .......... .......... .......... 43% 63.5M 2s 18000K .......... .......... .......... .......... .......... 43% 85.3M 2s 18050K .......... .......... .......... .......... .......... 43% 88.8M 2s 18100K .......... .......... .......... .......... .......... 43% 86.6M 2s 18150K .......... .......... 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.......... 45% 94.0M 2s 18850K .......... .......... .......... .......... .......... 45% 97.8M 2s 18900K .......... .......... .......... .......... .......... 45% 90.9M 2s 18950K .......... .......... .......... .......... .......... 45% 2.75M 2s 19000K .......... .......... .......... .......... .......... 46% 23.3M 2s 19050K .......... .......... .......... .......... .......... 46% 12.7M 2s 19100K .......... .......... .......... .......... .......... 46% 11.1M 2s 19150K .......... .......... .......... .......... .......... 46% 63.9M 2s 19200K .......... .......... .......... .......... .......... 46% 83.9M 2s 19250K .......... .......... .......... .......... .......... 46% 85.8M 2s 19300K .......... .......... .......... .......... .......... 46% 86.3M 2s 19350K .......... .......... .......... .......... .......... 46% 82.3M 2s 19400K .......... .......... .......... .......... .......... 47% 86.1M 2s 19450K .......... .......... .......... .......... .......... 47% 86.7M 2s 19500K .......... .......... .......... .......... .......... 47% 87.6M 2s 19550K .......... .......... .......... .......... .......... 47% 64.6M 2s 19600K .......... .......... .......... .......... .......... 47% 86.7M 2s 19650K .......... .......... .......... .......... .......... 47% 78.8M 2s 19700K .......... .......... .......... .......... .......... 47% 84.8M 2s 19750K .......... .......... .......... .......... .......... 47% 85.6M 2s 19800K .......... .......... .......... .......... .......... 47% 87.0M 2s 19850K .......... .......... .......... .......... .......... 48% 85.8M 2s 19900K .......... .......... .......... .......... .......... 48% 79.5M 2s 19950K .......... .......... .......... .......... .......... 48% 64.9M 2s 20000K .......... .......... .......... .......... .......... 48% 88.9M 2s 20050K .......... .......... .......... .......... .......... 48% 86.5M 2s 20100K .......... .......... .......... .......... .......... 48% 81.5M 2s 20150K .......... .......... .......... .......... .......... 48% 81.0M 2s 20200K .......... .......... .......... .......... .......... 48% 88.4M 2s 20250K .......... .......... .......... .......... .......... 49% 85.3M 2s 20300K .......... .......... .......... .......... .......... 49% 84.2M 2s 20350K .......... .......... .......... .......... .......... 49% 63.9M 2s 20400K .......... .......... .......... .......... .......... 49% 81.3M 2s 20450K .......... .......... .......... .......... .......... 49% 82.0M 2s 20500K .......... .......... .......... .......... .......... 49% 83.3M 2s 20550K .......... .......... .......... .......... .......... 49% 90.2M 2s 20600K .......... .......... .......... .......... .......... 49% 90.3M 2s 20650K .......... .......... .......... .......... .......... 50% 87.6M 2s 20700K .......... .......... .......... .......... .......... 50% 89.2M 2s 20750K .......... .......... .......... .......... .......... 50% 69.4M 2s 20800K .......... .......... .......... .......... .......... 50% 89.8M 2s 20850K .......... .......... .......... .......... .......... 50% 89.0M 2s 20900K .......... .......... .......... .......... .......... 50% 89.0M 2s 20950K .......... .......... .......... .......... .......... 50% 60.2M 2s 21000K .......... .......... .......... .......... .......... 50% 89.8M 2s 21050K .......... .......... .......... .......... .......... 51% 82.6M 2s 21100K .......... .......... .......... .......... .......... 51% 43.2M 2s 21150K .......... .......... .......... .......... .......... 51% 30.6M 2s 21200K .......... .......... .......... .......... .......... 51% 38.6M 2s 21250K .......... .......... .......... .......... .......... 51% 41.7M 2s 21300K .......... .......... .......... .......... .......... 51% 41.0M 2s 21350K .......... .......... .......... .......... .......... 51% 39.0M 2s 21400K .......... .......... .......... .......... .......... 51% 40.3M 2s 21450K .......... .......... .......... .......... .......... 51% 46.1M 2s 21500K .......... .......... .......... .......... .......... 52% 39.6M 2s 21550K .......... .......... .......... .......... .......... 52% 30.8M 2s 21600K .......... .......... .......... .......... .......... 52% 7.38M 2s 21650K .......... .......... .......... .......... .......... 52% 12.4M 2s 21700K .......... .......... .......... .......... .......... 52% 12.8M 2s 21750K .......... .......... .......... .......... .......... 52% 25.4M 2s 21800K .......... .......... .......... .......... .......... 52% 15.6M 2s 21850K .......... .......... .......... .......... .......... 52% 82.7M 2s 21900K .......... .......... .......... .......... .......... 53% 79.6M 2s 21950K .......... .......... .......... .......... .......... 53% 64.8M 2s 22000K .......... .......... .......... .......... .......... 53% 85.9M 2s 22050K .......... .......... .......... .......... .......... 53% 85.8M 2s 22100K .......... .......... .......... .......... .......... 53% 86.7M 2s 22150K .......... .......... .......... .......... .......... 53% 81.2M 2s 22200K .......... .......... .......... .......... .......... 53% 86.6M 2s 22250K .......... .......... .......... .......... .......... 53% 81.4M 2s 22300K .......... .......... .......... .......... .......... 54% 87.8M 2s 22350K .......... .......... .......... .......... .......... 54% 65.1M 2s 22400K .......... .......... .......... .......... .......... 54% 80.6M 2s 22450K .......... .......... .......... .......... .......... 54% 82.3M 2s 22500K .......... .......... .......... .......... .......... 54% 54.4M 2s 22550K .......... .......... .......... .......... .......... 54% 78.6M 2s 22600K .......... .......... .......... .......... .......... 54% 93.4M 2s 22650K .......... .......... .......... .......... .......... 54% 81.0M 2s 22700K .......... .......... .......... .......... .......... 54% 82.0M 1s 22750K .......... .......... .......... .......... .......... 55% 64.0M 1s 22800K .......... .......... 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rmg-release_2.1/RmgLib/include/vhartree.h rmg-release_2.1/RmgLib/include/BaseThreadControl.h rmg-release_2.1/RmgLib/Makefile rmg-release_2.1/RmgLib/CREDITS rmg-release_2.1/RmgLib/CMakeLists.txt rmg-release_2.1/RmgLib/examples/ rmg-release_2.1/RmgLib/examples/Poisson/ rmg-release_2.1/RmgLib/examples/Poisson/poisson_pbc.cpp rmg-release_2.1/RmgLib/src/ rmg-release_2.1/RmgLib/src/app_grad_driver.cpp rmg-release_2.1/RmgLib/src/RmgTimer.cpp rmg-release_2.1/RmgLib/src/Mgrid.cpp rmg-release_2.1/RmgLib/src/FiniteDiff.cpp rmg-release_2.1/RmgLib/src/BaseThread.cpp rmg-release_2.1/RmgLib/src/rmg_error.cpp rmg-release_2.1/RmgLib/src/TradeImages.cpp rmg-release_2.1/RmgLib/src/app_cir_driver.cpp rmg-release_2.1/RmgLib/src/RmgLib.cpp rmg-release_2.1/RmgLib/src/app_cil_driver.cpp rmg-release_2.1/RmgLib/src/RmgMaxAll.cpp cd rmg-release_2.1 mkdir build-cpu; cd build-cpu mkdir: cannot create directory `build-cpu': File exists cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so .. rmg-release_2.1/RmgLib/src/get_vh.cpp rmg-release_2.1/RmgLib/src/packfuncs.cpp rmg-release_2.1/RmgLib/src/Lattice.cpp rmg-release_2.1/RmgLib/src/app_cil_driver_threaded.cpp rmg-release_2.1/RmgLib/src/BaseGrid.cpp rmg-release_2.1/RmgLib/src/RmgPrintTimings.cpp rmg-release_2.1/RmgLib/src/app_del2_driver.cpp rmg-release_2.1/RmgLib/src/RmgSumAll.cpp rmg-release_2.1/RmgLib/CMakeFiles/ rmg-release_2.1/RmgLib/CMakeFiles/CMakeDirectoryInformation.cmake rmg-release_2.1/RmgLib/CMakeFiles/poisson_pbc.dir/ rmg-release_2.1/RmgLib/CMakeFiles/poisson_pbc.dir/depend.make rmg-release_2.1/RmgLib/CMakeFiles/poisson_pbc.dir/build.make 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rmg-release_2.1/Headers/RmgGemm.h rmg-release_2.1/Headers/init_var.h rmg-release_2.1/Headers/CheckValue.h rmg-release_2.1/Headers/svn-commit.tmp rmg-release_2.1/Headers/Solvers.h rmg-release_2.1/Headers/rmg_control.h rmg-release_2.1/Headers/svnrev.h rmg-release_2.1/Headers/BesselRoots.h rmg-release_2.1/Headers/RmgShm.h rmg-release_2.1/Headers/Subdiag.h rmg-release_2.1/Headers/mg.h rmg-release_2.1/Headers/pe_control.h rmg-release_2.1/Headers/rmgtypedefs.h rmg-release_2.1/Headers/input.h rmg-release_2.1/Headers/pack_3d.h rmg-release_2.1/Headers/Pw.h rmg-release_2.1/Headers/RmgException.h rmg-release_2.1/Headers/cnpy.h rmg-release_2.1/Headers/BesselRoots.h.sav rmg-release_2.1/Headers/blas.h rmg-release_2.1/Headers/RmgInputFile.h rmg-release_2.1/Headers/Atomic.h rmg-release_2.1/Headers/rmgthreads.h rmg-release_2.1/Headers/grid.h rmg-release_2.1/Headers/lbfgs.h rmg-release_2.1/Headers/common_prototypes.h rmg-release_2.1/Headers/macros.h rmg-release_2.1/Headers/make_conf.h rmg-release_2.1/Headers/GpuAlloc.h rmg-release_2.1/Headers/InternalPseudo.h rmg-release_2.1/Headers/common_prototypes1.h rmg-release_2.1/Headers/State.h rmg-release_2.1/Headers/main.h rmg-release_2.1/Headers/rmg_alloc.h rmg-release_2.1/Headers/const.h rmg-release_2.1/Headers/typedefs.h rmg-release_2.1/Headers/remap_3d.h rmg-release_2.1/Headers/InputOpts.h rmg-release_2.1/Headers/Scalapack.h rmg-release_2.1/Headers/RmgThread.h rmg-release_2.1/Headers/MapElements.h rmg-release_2.1/Headers/AtomicInterpolate.h rmg-release_2.1/Headers/params.h -- Boost version: 1.53.0 -- Found the following Boost libraries: -- thread -- system -- iostreams -- program_options -- filesystem CMake Warning (dev) at SubprojectIncludes/CMakeLists.txt.rmg.inc:5 (add_dependencies): Policy CMP0046 is not set: Error on non-existent dependency in add_dependencies. Run "cmake --help-policy CMP0046" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The dependency target "libspg" of target "rmg-cpu" does not exist. Call Stack (most recent call first): CMakeLists.txt:589 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done nice make -j12 rmg-cpu -- Generating done -- Build files have been written to: /u/system/bwjenkins/rmg-spp/rmg-release_2.1/build-cpu [ 1%] [ 1%] Built target InternalPseudo Built target MG [ 5%] Built target XC1 [ 7%] Built target Force [ 8%] Built target RMG_Spin [ 13%] Built target XC [ 20%] Built target RmgLib [ 24%] Built target RMG_Subdiag [ 29%] Built target Finite_diff [ 34%] Built target Input [ 40%] Built target RMG_Spin_XC [ 49%] Built target US_PP [ 72%] Built target Misc rm -rf ~/scratch/rmg-spp [ 98%] Built target RMG_Common [100%] Built target rmg-cpu mkdir -p ~/scratch/rmg-spp cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/ cd ~/scratch/rmg-spp cat run.pbs | grep -v aprun > myrun.pbs echo "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/rmg-spp/openbabel-2.3.2/install/lib" >> myrun.pbs echo "time aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs cat -n myrun.pbs MYJOBID=`qsub myrun.pbs` qsub myrun.pbs 1 #!/bin/bash 2 #PBS -N z302water_cpu100 3 #PBS -j oe 4 #PBS -l walltime=00:59:00 5 #PBS -l nodes=100:ppn=32:xe 6 #PBS -q normal 7 8 source /opt/modules/default/init/bash 9 module list 10 11 cd $PBS_O_WORKDIR 12 13 export MPICH_MAX_THREAD_SAFETY=serialized 14 export OMP_WAIT_POLICY=passive 15 export MPICH_ENV_DISPLAY=1 16 ulimit -a 17 export MPICH_GNI_MBOX_PLACEMENT=nic 18 export MPICH_GNI_RDMA_THRESHOLD=1024 19 export MPICH_GNI_NUM_BUFS=512 20 export MPICH_GNI_MAX_EAGER_MSG_SIZE=65536 21 export OMP_NUM_THREADS=4 22 23 24 export LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib:~/rmg-spp/openbabel-2.3.2/install/lib 25 time aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu INFO: Job submitted to account: jnc echo MYJOBID=$MYJOBID ~arnoldg/ior/wait_for.sh $MYJOBID MYJOBID=8111100.bw === RUNNING /u/staff/arnoldg/ior/wait_for.sh === Thu Jan 25 10:16:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:21:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:26:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:31:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:36:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:41:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:46:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:51:29 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 10:56:30 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 11:01:30 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 11:06:30 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 11:11:30 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 11:16:30 CST 2018: waiting for 8111100.bw to finish Thu Jan 25 11:21:30 CST 2018: waiting for 8111100.bw to finish qstat: Unknown Job Id Error 8111100.bw tail *.log > ~/rmg-spp/rmg.logtail.txt grep "real" z302water_cpu100.o* MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1 echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime cat -n ~/rmg-spp/rmg.realtime 8111100.bw finished real-time priority (-r) 0 real 51m35.740s 1 YVALUE= 51 [SSH] exit-status: 0 [rmg-spp] $ /bin/sh -xe /tmp/jenkins1362202936119201592.sh + scp 'BW_REMOTE:~/rmg-spp/*.txt' /var/lib/jenkins/workspace/rmg-spp Access by OTP or Two Factor Certificate Authority only. Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access. gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access. Blue Waters Admin Team + scp 'BW_REMOTE:~/rmg-spp/rmg.realtime' /var/lib/jenkins/workspace/rmg-spp Access by OTP or Two Factor Certificate Authority only. Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access. gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access. Blue Waters Admin Team Recording plot data Saving plot series data from: /var/lib/jenkins/workspace/rmg-spp/rmg.realtime Finished: SUCCESS