Started by user arnoldg
Building on master in workspace /var/lib/jenkins/workspace/rmg-spp
executing script:
PATH="/sw/tools/bin:/sw/tools/bin:$PATH"
set -v
# specify installation directory
export INSTDIR=~/rmg-spp
#rm -rf $INSTDIR
mkdir $INSTDIR
module swap PrgEnv-cray PrgEnv-gnu
module swap gcc gcc/4.9.3
module load boost
module load cmake/3.1.3
module load fftw
export CRAYPE_LINK_TYPE=dynamic
export CRAY_ADD_RPATH=yes
# install openbabel library
cd $INSTDIR
wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
tar zxvf openbabel-2.3.2.tar.gz
cd openbabel-2.3.2/
mkdir build
cd build/
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install ..
nice make -j8
make install
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib
export CC=cc
export CXX=CC
export FC=ftn
# install plplot library
cd $INSTDIR
git clone git://git.code.sf.net/p/plplot/plplot plplot.git
cd plplot.git/
mkdir build
cd build
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install ..
make
make install
# install CPU-version of RMG
cd $INSTDIR
wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
tar zxvf rmg-release_2.1.tar.gz
cd rmg-release_2.1
mkdir build-cpu; cd build-cpu
cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so ..
nice make -j12 rmg-cpu
rm -rf ~/scratch/rmg-spp
mkdir -p ~/scratch/rmg-spp
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/
cd ~/scratch/rmg-spp
cat run.pbs | grep -v aprun > myrun.pbs
echo "aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs
cat -n myrun.pbs
MYJOBID=`qsub myrun.pbs`
echo MYJOBID=$MYJOBID
~arnoldg/ior/wait_for.sh $MYJOBID
tail *.log > ~/rmg-spp/rmg.logtail.txt
# specify installation directory
export INSTDIR=~/rmg-spp
#rm -rf $INSTDIR
mkdir $INSTDIR
mkdir: cannot create directory `/u/system/bwjenkins/rmg-spp': File exists
module swap PrgEnv-cray PrgEnv-gnu
${MODULESHOME}/bin/modulecmd bash $*
ATP_HOME=/opt/cray/atp/2.0.1 ;export ATP_HOME;ATP_IGNORE_SIGTERM=1 ;export ATP_IGNORE_SIGTERM;ATP_MRNET_COMM_PATH=/opt/cray/atp/2.0.1/libexec/atp_mrnet_commnode_wrapper ;export ATP_MRNET_COMM_PATH;ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/2.0.1/libApp/\ ;export ATP_POST_LINK_OPTS;CRAYOS_VERSION=5.2.82 ;export CRAYOS_VERSION;CRAYPE_DIR=/opt/cray/craype/2.5.4 ;export CRAYPE_DIR;CRAYPE_NETWORK_TARGET=gemini ;export CRAYPE_NETWORK_TARGET;CRAYPE_VERSION=2.5.4 ;export CRAYPE_VERSION;CRAY_ALPS_INCLUDE_OPTS=-I/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/include ;export CRAY_ALPS_INCLUDE_OPTS;CRAY_ALPS_POST_LINK_OPTS=-L/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64 ;export CRAY_ALPS_POST_LINK_OPTS;CRAY_CPU_TARGET=interlagos ;export CRAY_CPU_TARGET;CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/include\ -I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include\ ;export CRAY_DMAPP_INCLUDE_OPTS;CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64 ;export CRAY_DMAPP_POST_LINK_OPTS;CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include ;export CRAY_GNI_HEADERS_INCLUDE_OPTS;CRAY_LD_LIBRARY_PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/16.03.1 ;export CRAY_LIBSCI_BASE_DIR;CRAY_LIBSCI_DIR=/opt/cray/libsci/16.03.1 ;export CRAY_LIBSCI_DIR;CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/16.03.1/GNU/4.9/x86_64 ;export CRAY_LIBSCI_PREFIX_DIR;CRAY_LIBSCI_VERSION=16.03.1 ;export CRAY_LIBSCI_VERSION;CRAY_MPICH2_DIR=/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9 ;export CRAY_MPICH2_DIR;CRAY_MPICH2_VER=7.3.3 ;export CRAY_MPICH2_VER;CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.3.3/gni ;export CRAY_MPICH_BASEDIR;CRAY_MPICH_DIR=/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9 ;export CRAY_MPICH_DIR;CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.3.3 ;export CRAY_MPICH_ROOTDIR;CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/include ;export CRAY_PMI_INCLUDE_OPTS;CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64 ;export CRAY_PMI_POST_LINK_OPTS;CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini ;export CRAY_PRE_COMPILE_OPTS;CRAY_PRGENVGNU=loaded ;export CRAY_PRGENVGNU;CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/include\ -I/opt/cray/krca/1.0.0-2.0502.63139.4.30.gem/include\ -I/opt/cray-hss-devel/7.2.0/include\ ;export CRAY_RCA_INCLUDE_OPTS;CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64\ -lrca\ ;export CRAY_RCA_POST_LINK_OPTS;CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/include ;export CRAY_UDREG_INCLUDE_OPTS;CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64 ;export CRAY_UDREG_POST_LINK_OPTS;CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/include ;export CRAY_UGNI_INCLUDE_OPTS;CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64 ;export CRAY_UGNI_POST_LINK_OPTS;CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/include ;export CRAY_XPMEM_INCLUDE_OPTS;CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64 ;export CRAY_XPMEM_POST_LINK_OPTS;DMAPP_ABORT_ON_ERROR=1 ;export DMAPP_ABORT_ON_ERROR;DVS_INCLUDE_OPTS=-I/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/include ;export DVS_INCLUDE_OPTS;DVS_VERSION=0.9.0 ;export DVS_VERSION;GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LIBSCI_BASE_DIR=/opt/cray/libsci/16.03.1 ;export LIBSCI_BASE_DIR;LIBSCI_VERSION=16.03.1 ;export LIBSCI_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:cray-mpich/7.3.3:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/mpt/7.3.3/gni/man/mpich:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;MODULEPATH=/sw/bw/modulefiles:/sw/xe/modulefiles:/usr/local/modulefiles:/opt/cray/gem/modulefiles:/opt/cray/craype/2.5.4/modulefiles:/opt/cray/modulefiles:/opt/modulefiles ;export MODULEPATH;MPICH_ABORT_ON_ERROR=1 ;export MPICH_ABORT_ON_ERROR;MPICH_DIR=/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9 ;export MPICH_DIR;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/mpt/7.3.3/gni/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_ACML_DEFAULT_DIR_CRAY=gfortran64 ;export PE_ACML_DEFAULT_DIR_CRAY;PE_ACML_DEFAULT_DIR_DEFAULT64=_int64 ;export PE_ACML_DEFAULT_DIR_DEFAULT64;PE_ACML_DEFAULT_DIR_GNU=gfortran64 ;export PE_ACML_DEFAULT_DIR_GNU;PE_ACML_DEFAULT_DIR_INTEL=ifort64 ;export PE_ACML_DEFAULT_DIR_INTEL;PE_ACML_DEFAULT_DIR_OPENMP=_mp ;export PE_ACML_DEFAULT_DIR_OPENMP;PE_ACML_DEFAULT_DIR_PGI=pgi64 ;export PE_ACML_DEFAULT_DIR_PGI;PE_ACML_DEFAULT_TARGET_interlagos=_fma4 ;export PE_ACML_DEFAULT_TARGET_interlagos;PE_ACML_DEFAULT_TARGET_x86_64= ;export PE_ACML_DEFAULT_TARGET_x86_64;PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/acml/5.3.1/@PE_ACML_DEFAULT_DIR@@PE_ACML_DEFAULT_TARGET@@PE_ACML_DEFAULT_DIR_OPENMP@@PE_ACML_DEFAULT_DIR_DEFAULT64@/lib/pkgconfig ;export PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf/4.4.0/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.8.16/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5/1.8.16/CRAY/8.3/lib/pkgconfig:/opt/cray/ga/5.3.0.6/CRAY/8.3/lib/pkgconfig ;export PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH;PE_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_CXX_PKGCONFIG_LIBS;PE_ENV=GNU ;export PE_ENV;PE_FFTW_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_DEFAULT_REQUIRED_PRODUCTS;PE_FFTW_DEFAULT_TARGET_broadwell=broadwell ;export PE_FFTW_DEFAULT_TARGET_broadwell;PE_FFTW_DEFAULT_TARGET_haswell=haswell ;export PE_FFTW_DEFAULT_TARGET_haswell;PE_FFTW_DEFAULT_TARGET_interlagos=interlagos ;export PE_FFTW_DEFAULT_TARGET_interlagos;PE_FFTW_DEFAULT_TARGET_mic_knl=mic_knl ;export PE_FFTW_DEFAULT_TARGET_mic_knl;PE_FFTW_DEFAULT_TARGET_sandybridge=sandybridge ;export PE_FFTW_DEFAULT_TARGET_sandybridge;PE_FFTW_DEFAULT_TARGET_x86_64=x86_64 ;export PE_FFTW_DEFAULT_TARGET_x86_64;PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.7/@PE_FFTW_DEFAULT_TARGET@/lib/pkgconfig ;export PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_FORTRAN_PKGCONFIG_LIBS;PE_GA_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_GA_DEFAULT_FIXED_PRGENV;PE_GA_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_GA_DEFAULT_GENCOMPILERS_GNU;PE_GA_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_GA_DEFAULT_GENCOMPS_GNU;PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/ga/5.3.0.6/@PRGENV@/@PE_GA_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_GA_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_GA_DEFAULT_VOLATILE_PRGENV;PE_HDF5_DEFAULT_FIXED_PRGENV=CRAY\ PGI ;export PE_HDF5_DEFAULT_FIXED_PRGENV;PE_HDF5_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_DEFAULT_GENCOMPILERS_INTEL=15.0\ 14.0 ;export PE_HDF5_DEFAULT_GENCOMPILERS_INTEL;PE_HDF5_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_DEFAULT_GENCOMPS_GNU;PE_HDF5_DEFAULT_GENCOMPS_INTEL=150\ 140 ;export PE_HDF5_DEFAULT_GENCOMPS_INTEL;PE_HDF5_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5/1.8.16/@PRGENV@/@PE_HDF5_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_DEFAULT_VOLATILE_PRGENV=GNU\ INTEL ;export PE_HDF5_DEFAULT_VOLATILE_PRGENV;PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI ;export PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_INTEL=15.0\ 14.0 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_INTEL;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_INTEL=150\ 140 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_INTEL;PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5-parallel/1.8.16/@PRGENV@/@PE_HDF5_PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU\ INTEL ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf/4.4.0/INTEL/15.0/lib/pkgconfig:/opt/cray/mpt/7.3.3/gni/mpich-intel/15.0/lib/pkgconfig:/opt/cray/ga/5.3.0.6/INTEL/15.0/lib/pkgconfig ;export PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64=4.9 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64=49 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20=nv20 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35=nv35 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35;PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_@accelerator@ ;export PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci_acc/16.03.1/@PRGENV@/@PE_LIBSCI_ACC_DEFAULT_GENCOMPS@/@PE_LIBSCI_ACC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64;PE_LIBSCI_DEFAULT_OMP_REQUIRES= ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES;PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp;PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_DEFAULT_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.03.1/@PRGENV@/@PE_LIBSCI_DEFAULT_GENCOMPS@/@PE_LIBSCI_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_GENCOMPS_CRAY_x86_64;PE_LIBSCI_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_GENCOMPS_GNU_mic_knl;PE_LIBSCI_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_GENCOMPS_GNU_x86_64;PE_LIBSCI_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_GENCOMPS_INTEL_x86_64;PE_LIBSCI_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_GENCOMPS_PGI_x86_64;PE_LIBSCI_MODULE_NAME=cray-libsci/16.03.1 ;export PE_LIBSCI_MODULE_NAME;PE_LIBSCI_OMP_REQUIRES= ;export PE_LIBSCI_OMP_REQUIRES;PE_LIBSCI_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_OMP_REQUIRES_openmp;PE_LIBSCI_PKGCONFIG_LIBS=libsci_mpi:libsci ;export PE_LIBSCI_PKGCONFIG_LIBS;PE_LIBSCI_PKGCONFIG_VARIABLES=PE_LIBSCI_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_PKGCONFIG_VARIABLES;PE_LIBSCI_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_REQUIRED_PRODUCTS;PE_LIBSCI_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.03.1/@PRGENV@/@PE_LIBSCI_GENCOMPS@/@PE_LIBSCI_TARGET@/lib/pkgconfig ;export PE_LIBSCI_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_VOLATILE_PRGENV;PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_MPICH_CXX_PKGCONFIG_LIBS;PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64;PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64;PE_MPICH_DEFAULT_FIXED_PRGENV=INTEL ;export PE_MPICH_DEFAULT_FIXED_PRGENV;PE_MPICH_DEFAULT_GENCOMPILERS_CRAY=8.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_CRAY;PE_MPICH_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_MPICH_DEFAULT_GENCOMPILERS_GNU;PE_MPICH_DEFAULT_GENCOMPILERS_PGI=15.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_PGI;PE_MPICH_DEFAULT_GENCOMPS_CRAY=83 ;export PE_MPICH_DEFAULT_GENCOMPS_CRAY;PE_MPICH_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_MPICH_DEFAULT_GENCOMPS_GNU;PE_MPICH_DEFAULT_GENCOMPS_PGI=153 ;export PE_MPICH_DEFAULT_GENCOMPS_PGI;PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.3.3/gni/mpich-@PRGENV@@PE_MPICH_DEFAULT_DIR_DEFAULT64@/@PE_MPICH_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_MPICH_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ PGI ;export PE_MPICH_DEFAULT_VOLATILE_PRGENV;PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_MPICH_FORTRAN_PKGCONFIG_LIBS;PE_MPICH_MODULE_NAME=cray-mpich ;export PE_MPICH_MODULE_NAME;PE_MPICH_MULTITHREADED_LIBS_multithreaded=_mt ;export PE_MPICH_MULTITHREADED_LIBS_multithreaded;PE_MPICH_NV_LIBS= ;export PE_MPICH_NV_LIBS;PE_MPICH_NV_LIBS_nvidia20=-lcudart ;export PE_MPICH_NV_LIBS_nvidia20;PE_MPICH_NV_LIBS_nvidia35=-lcudart ;export PE_MPICH_NV_LIBS_nvidia35;PE_MPICH_PKGCONFIG_LIBS=mpich ;export PE_MPICH_PKGCONFIG_LIBS;PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_MULTITHREADED_LIBS_@multithreaded@ ;export PE_MPICH_PKGCONFIG_VARIABLES;PE_MPICH_TARGET_VAR_nvidia20=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia20;PE_MPICH_TARGET_VAR_nvidia35=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia35;PE_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_DEFAULT_FIXED_PRGENV;PE_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_DEFAULT_GENCOMPS_GNU;PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5 ;export PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf/4.4.0/@PRGENV@/@PE_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5_PARALLEL:PE_MPICH ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf-hdf5parallel/4.4.0/@PRGENV@/@PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_PAPI_DEFAULT_ACCEL_LIBS= ;export PE_PAPI_DEFAULT_ACCEL_LIBS;PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35;PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES=PE_PAPI_ACCEL_LIBS_@accelerator@ ;export PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES;PE_PAPI_DEFAULT_TARGET_VAR_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_TARGET_VAR_nvidia35;PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/@PRGENV@/@PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64;PE_PETSC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI:PE_HDF5_PARALLEL:PE_TPSL ;export PE_PETSC_DEFAULT_REQUIRED_PRODUCTS;PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/petsc/3.6.3.0/complex/@PRGENV@/@PE_PETSC_DEFAULT_GENCOMPS@/@PE_PETSC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PETSC_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_PETSC_DEFAULT_VOLATILE_PRGENV;PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf/4.4.0/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.8.16/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5/1.8.16/PGI/15.3/lib/pkgconfig:/opt/cray/ga/5.3.0.6/PGI/15.3/lib/pkgconfig ;export PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH;PE_PKGCONFIG_DEFAULT_PRODUCTS=PE_TRILINOS:PE_TPSL_64:PE_TPSL:PE_PETSC:PE_PARALLEL_NETCDF:PE_NETCDF_HDF5PARALLEL:PE_NETCDF:PE_MPICH:PE_LIBSCI_ACC:PE_LIBSCI:PE_HDF5_PARALLEL:PE_HDF5:PE_GA:PE_FFTW:PE_ACML ;export PE_PKGCONFIG_DEFAULT_PRODUCTS;PE_PKGCONFIG_LIBS=AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;PE_PKGCONFIG_PRODUCTS_DEFAULT=PE_PAPI ;export PE_PKGCONFIG_PRODUCTS_DEFAULT;PE_PKG_CONFIG_PATH=/opt/cray/cti/1.0.4/lib/pkgconfig ;export PE_PKG_CONFIG_PATH;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS ;export PE_PRODUCT_LIST;PE_SMA_DEFAULT_COMPFLAG= ;export PE_SMA_DEFAULT_COMPFLAG;PE_SMA_DEFAULT_COMPFLAG_GNU=-fcray-pointer ;export PE_SMA_DEFAULT_COMPFLAG_GNU;PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64;PE_SMA_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_PGI_DEFAULT64;PE_SMA_DEFAULT_PKGCONFIG_VARIABLES=PE_SMA_COMPFLAG_@prgenv@ ;export PE_SMA_DEFAULT_PKGCONFIG_VARIABLES;PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.3.3/gni/sma@PE_SMA_DEFAULT_DIR_DEFAULT64@/lib64/pkgconfig ;export PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.03.1/@PRGENV@64/@PE_TPSL_64_DEFAULT_GENCOMPS@/@PE_TPSL_64_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_64_DEFAULT_VOLATILE_PRGENV;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.03.1/@PRGENV@/@PE_TPSL_DEFAULT_GENCOMPS@/@PE_TPSL_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_DEFAULT_VOLATILE_PRGENV;PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.4 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64=84 ;export PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TRILINOSmodule swap gcc gcc/4.9.3
module load boost
module load cmake/3.1.3
module load fftw
export CRAYPE_LINK_TYPE=dynamic
export CRAY_ADD_RPATH=yes
# install openbabel library
cd $INSTDIR
wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
--2016-12-14 09:25:41-- http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
Resolving downloads.sourceforge.net... 216.34.181.59
Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz [following]
--2016-12-14 09:25:41-- https://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
Resolving superb-sea2.dl.sourceforge.net... 209.160.57.180
Connecting to superb-sea2.dl.sourceforge.net|209.160.57.180|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 20509105 (20M) [application/x-gzip]
Saving to: `openbabel-2.3.2.tar.gz.1'
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8900K .......... .......... .......... .......... .......... 44% 61.6M 1s
8950K .......... .......... .......... .......... .......... 44% 45.1M 1s
9000K .......... .......... .......... .......... .......... 45% 83.5M 1s
9050K .......... .......... .......... .......... .......... 45% 53.1M 1s
9100K .......... .......... .......... .......... .......... 45% 72.1M 1s
9150K .......... .......... .......... .......... .......... 45% 47.9M 1s
9200K .......... .......... .......... .......... .......... 46% 1.62M 1s
9250K .......... .......... .......... .......... .......... 46% 87.6M 1s
9300K .......... .......... .......... .......... .......... 46% 90.0M 1s
9350K .......... .......... .......... .......... .......... 46% 86.2M 1s
9400K .......... .......... .......... .......... .......... 47% 53.3M 1s
9450K .......... .......... .......... .......... .......... 47% 41.2M 1s
9500K .......... .......... .......... .......... .......... 47% 75.1M 1s
9550K .......... .......... .......... .......... .......... 47% 43.1M 1s
9600K .......... .......... .......... .......... .......... 48% 48.9M 1s
9650K .......... .......... .......... .......... .......... 48% 24.2M 1s
9700K .......... .......... .......... .......... .......... 48% 79.5M 1s
9750K .......... .......... .......... .......... .......... 48% 74.7M 1s
9800K .......... .......... .......... .......... .......... 49% 76.3M 1s
9850K .......... .......... .......... .......... .......... 49% 56.9M 1s
9900K .......... .......... .......... .......... .......... 49% 83.5M 1s
9950K .......... .......... .......... .......... .......... 49% 28.6M 1s
10000K .......... .......... .......... .......... .......... 50% 83.0M 1s
10050K .......... .......... .......... .......... .......... 50% 37.1M 1s
10100K .......... .......... .......... .......... .......... 50% 42.3M 1s
10150K .......... .......... .......... .......... .......... 50% 56.9M 1s
10200K .......... .......... .......... .......... .......... 51% 46.1M 1s
10250K .......... .......... .......... .......... .......... 51% 79.0M 1s
10300K .......... .......... .......... .......... .......... 51% 46.4M 1s
10350K .......... .......... .......... .......... .......... 51% 1.98M 1s
10400K .......... .......... .......... .......... .......... 52% 76.3M 1s
10450K .......... .......... .......... .......... .......... 52% 87.4M 1s
10500K .......... .......... .......... .......... .......... 52% 86.8M 1s
10550K .......... .......... .......... .......... .......... 52% 26.1M 1s
10600K .......... .......... .......... .......... .......... 53% 58.8M 1s
10650K .......... .......... .......... .......... .......... 53% 53.9M 1s
10700K .......... .......... .......... .......... .......... 53% 50.3M 1s
10750K .......... .......... .......... .......... .......... 53% 28.2M 1s
10800K .......... .......... .......... .......... .......... 54% 67.7M 1s
10850K .......... .......... .......... .......... .......... 54% 40.5M 1s
10900K .......... .......... .......... .......... .......... 54% 62.0M 1s
10950K .......... .......... .......... .......... .......... 54% 46.9M 1s
11000K .......... .......... .......... .......... .......... 55% 42.7M 1s
11050K .......... .......... .......... .......... .......... 55% 49.4M 1s
11100K .......... .......... .......... .......... .......... 55% 50.8M 1s
11150K .......... .......... .......... .......... .......... 55% 21.4M 1s
11200K .......... .......... .......... .......... .......... 56% 58.6M 1s
11250K .......... .......... .......... .......... .......... 56% 2.82M 1s
11300K .......... .......... .......... .......... .......... 56% 83.6M 1s
11350K .......... .......... .......... .......... .......... 56% 93.7M 1s
11400K .......... .......... .......... .......... .......... 57% 1.49M 1s
11450K .......... .......... .......... .......... .......... 57% 50.2M 1s
11500K .......... .......... .......... .......... .......... 57% 57.8M 1s
11550K .......... .......... .......... .......... .......... 57% 55.0M 1s
11600K .......... .......... .......... .......... .......... 58% 3.30M 1s
11650K .......... .......... .......... .......... .......... 58% 76.6M 1s
11700K .......... .......... .......... .......... .......... 58% 84.3M 1s
11750K .......... .......... .......... .......... .......... 58% 81.9M 1s
11800K .......... .......... .......... .......... .......... 59% 87.5M 1s
11850K .......... .......... .......... .......... .......... 59% 81.8M 1s
11900K .......... .......... .......... .......... .......... 59% 92.6M 1s
11950K .......... .......... .......... .......... .......... 59% 60.1M 1s
12000K .......... .......... .......... .......... .......... 60% 83.2M 1s
12050K .......... .......... .......... .......... .......... 60% 78.1M 1s
12100K .......... .......... .......... .......... .......... 60% 78.9M 1s
12150K .......... .......... .......... .......... .......... 60% 86.8M 1s
12200K .......... .......... .......... .......... .......... 61% 79.8M 1s
12250K .......... .......... .......... .......... .......... 61% 68.4M 1s
12300K .......... .......... .......... .......... .......... 61% 69.3M 1s
12350K .......... .......... .......... .......... .......... 61% 61.3M 1s
12400K .......... .......... .......... .......... .......... 62% 87.3M 1s
12450K .......... .......... .......... .......... .......... 62% 89.8M 1s
12500K .......... .......... .......... .......... .......... 62% 81.0M 1s
12550K .......... .......... .......... .......... .......... 62% 63.4M 1s
12600K .......... .......... .......... .......... .......... 63% 66.6M 1s
12650K .......... .......... .......... .......... .......... 63% 75.5M 1s
12700K .......... .......... .......... .......... .......... 63% 79.8M 1s
12750K .......... .......... .......... .......... .......... 63% 66.0M 1s
12800K .......... .......... .......... .......... .......... 64% 88.4M 1s
12850K .......... .......... .......... .......... .......... 64% 68.6M 1s
12900K .......... .......... .......... .......... .......... 64% 75.2M 1s
12950K .......... .......... .......... .......... .......... 64% 1.62M 1s
13000K .......... .......... .......... .......... .......... 65% 47.2M 1s
13050K .......... .......... .......... .......... .......... 65% 40.9M 1s
13100K .......... .......... .......... .......... .......... 65% 35.2M 1s
13150K .......... .......... .......... .......... .......... 65% 40.6M 1s
13200K .......... .......... .......... .......... .......... 66% 39.3M 1s
13250K .......... .......... .......... .......... .......... 66% 34.9M 1s
13300K .......... ._DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TRILINOS_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_HDF5_PARALLEL:PE_NETCDF_HDF5PARALLEL:PE_LIBSCI:PE_TPSL ;export PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS;PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/trilinos/12.2.1.0/@PRGENV@/@PE_TRILINOS_DEFAULT_GENCOMPS@/@PE_TRILINOS_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TRILINOS_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL ;export PE_TRILINOS_DEFAULT_VOLATILE_PRGENV;PKGCONFIG_ENABLED=1 ;export PKGCONFIG_ENABLED;PKG_CONFIG_PATH=/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/pkgconfig:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/pkgconfig:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64/pkgconfig:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64/pkgconfig:/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/lib64/pkgconfig:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64/pkgconfig:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64/pkgconfig:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64/pkgconfig:/opt/cray/craype/2.5.4/pkg-config:/opt/cray/iobuf/2.0.6/lib/pkgconfig:/opt/cray/atp/2.0.1/lib/pkgconfig ;export PKG_CONFIG_PATH;PKG_CONFIG_PATH_DEFAULT=/opt/cray/papi/5.4.3.1/lib64/pkgconfig ;export PKG_CONFIG_PATH_DEFAULT;SHMEM_ABORT_ON_ERROR=1 ;export SHMEM_ABORT_ON_ERROR;XTOS_VERSION=5.2.82 ;export XTOS_VERSION;XTPE_NETWORK_TARGET=gemini ;export XTPE_NETWORK_TARGET;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-mpich/7.3.3:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;unset ASSEMBLER_X86_64;unset CC_X86_64;unset CRAYLIBS_X86_64;unset CRAYLMD_LICENSE_FILE;unset CRAY_BINUTILS_BIN;unset CRAY_BINUTILS_ROOT;unset CRAY_BINUTILS_VERSION;unset CRAY_CC_VERSION;unset CRAY_CXX_IPA_LIBS;unset CRAY_FTN_VERSION;unset CRAY_PE_TARGET;unset CRAY_PRGENVCRAY;unset FORTRAN_SYSTEM_MODULE_NAMES;unset FTN_X86_64;unset GCC_X86_64;unset INCLUDE_PATH_X86_64;unset LINKER_X86_64;unset NLSPATH;unset PE_LEVEL;
${MODULESHOME}/bin/modulecmd bash $*
GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:cray-mpich/7.3.3:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/mpt/7.3.3/gni/man/mpich:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/mpt/7.3.3/gni/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-mpich/7.3.3:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
BOOST_ROOT=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2 ;export BOOST_ROOT;CRAY_BOOST_DIR=/sw/xe/boost/1.53.0 ;export CRAY_BOOST_DIR;CRAY_BOOST_INCLUDE_OPTS=-I/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/include ;export CRAY_BOOST_INCLUDE_OPTS;CRAY_BOOST_POST_LINK_OPTS=-L/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib ;export CRAY_BOOST_POST_LINK_OPTS;CRAY_BOOST_VERSION=1.53.0 ;export CRAY_BOOST_VERSION;LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib:/usr/local/globus-5.2.5/lib64:/opt/torque/6.0.1-end/lib:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:cray-mpich/7.3.3:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0 ;export LOADEDMODULES;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS:CRAY_BOOST ;export PE_PRODUCT_LIST;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-mpich/7.3.3:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:cray-mpich/7.3.3:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3 ;export LOADEDMODULES;PATH=/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/mpt/7.3.3/gni/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-mpich/7.3.3:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
CRAY_FFTW_VERSION=3.3.4.7 ;export CRAY_FFTW_VERSION;CRAY_LD_LIBRARY_PATH=/opt/cray/fftw/3.3.4.7/interlagos/lib:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;FFTW_DIR=/opt/cray/fftw/3.3.4.7/interlagos/lib ;export FFTW_DIR;FFTW_INC=/opt/cray/fftw/3.3.4.7/interlagos/include ;export FFTW_INC;FFTW_VERSION=3.3.4.7 ;export FFTW_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1278.0:gcc/4.9.3:craype-network-gemini:craype-interlagos:craype/2.5.4:cray-mpich/7.3.3:torque/6.0.1:moab/9.0.2.TAS2-1477409647_6706986-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:darshan/2.3.0.1:scripts:user-paths:xalt/0.7.6:cray-libsci/16.03.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.1:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3:fftw/3.3.4.7 ;export LOADEDMODULES;MANPATH=/opt/cray/fftw/3.3.4.7/share/man:/opt/cray/atp/2.0.1/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.03.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.0.2t2/share/man/:/opt/torque/6.0.1-end/share/man:/opt/cray/mpt/7.3.3/gni/man/mpich:/opt/cray/craype/2.5.4/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.0.2t2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/fftw/3.3.4.7/interlagos/bin:/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/libexec:/sw/xe_xk_cle5.2UP02_pe2.3.0/xalt/0.7.6/sles11.3/bin:/sw/admin/scripts:/sw/user/scripts:/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.0.2t2/sbin:/opt/torque/6.0.1-end/sbin:/opt/torque/6.0.1-end/bin:/opt/cray/mpt/7.3.3/gni/bin:/opt/cray/craype/2.5.4/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.0.2t2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_FFTW_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_REQUIRED_PRODUCTS;PE_FFTW_TARGET_broadwell=broadwell ;export PE_FFTW_TARGET_broadwell;PE_FFTW_TARGET_haswell=haswell ;export PE_FFTW_TARGET_haswell;PE_FFTW_TARGET_interlagos=interlagos ;export PE_FFTW_TARGET_interlagos;PE_FFTW_TARGET_mic_knl=mic_knl ;export PE_FFTW_TARGET_mic_knl;PE_FFTW_TARGET_sandybridge=sandybridge ;export PE_FFTW_TARGET_sandybridge;PE_FFTW_TARGET_x86_64=x86_64 ;export PE_FFTW_TARGET_x86_64;PE_FFTW_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.7/@PE_FFTW_TARGET@/lib/pkgconfig ;export PE_FFTW_VOLATILE_PKGCONFIG_PATH;PE_PKGCONFIG_LIBS=fftw3f_mpi:fftw3f_threads:fftw3f:fftw3_mpi:fftw3_threads:fftw3:AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_FFTW:PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1278.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.4/modulefiles/craype-network-gemini:/opt/cray/craype/2.5.4/modulefiles/craype-interlagos:/opt/cray/modulefiles/craype/2.5.4:/opt/cray/modulefiles/cray-mpich/7.3.3:/opt/modulefiles/torque/6.0.1:/opt/modulefiles/moab/9.0.2.TAS2-1477409647_6706986-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/sw/xe/modulefiles/darshan/2.3.0.1:/sw/xe/modulefiles/scripts:/sw/xe/modulefiles/user-paths:/sw/bw/modulefiles/xalt/0.7.6:/opt/cray/modulefiles/cray-libsci/16.03.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.1:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3:/opt/cray/modulefiles/fftw/3.3.4.7 ;export _LMFILES_;
......... .......... .......... .......... 66% 2.71M 1s
13350K .......... .......... .......... .......... .......... 66% 79.0M 1s
13400K .......... .......... .......... .......... .......... 67% 77.7M 1s
13450K .......... .......... .......... .......... .......... 67% 81.4M 1s
13500K .......... .......... .......... .......... .......... 67% 78.7M 1s
13550K .......... .......... .......... .......... .......... 67% 61.3M 1s
13600K .......... .......... .......... .......... .......... 68% 83.9M 1s
13650K .......... .......... .......... .......... .......... 68% 79.3M 1s
13700K .......... .......... .......... .......... .......... 68% 83.1M 1s
13750K .......... .......... .......... .......... .......... 68% 3.32M 1s
13800K .......... .......... .......... .......... .......... 69% 27.0M 1s
13850K .......... .......... .......... .......... .......... 69% 49.4M 1s
13900K .......... .......... .......... .......... .......... 69% 59.0M 1s
13950K .......... .......... .......... .......... .......... 69% 38.1M 1s
14000K .......... .......... .......... .......... .......... 70% 44.1M 1s
14050K .......... .......... .......... .......... .......... 70% 25.7M 1s
14100K .......... .......... .......... .......... .......... 70% 2.75M 1s
14150K .......... .......... .......... .......... .......... 70% 77.2M 1s
14200K .......... .......... .......... .......... .......... 71% 79.0M 1s
14250K .......... .......... .......... .......... .......... 71% 936K 1s
14300K .......... .......... .......... .......... .......... 71% 48.8M 1s
14350K .......... .......... .......... .......... .......... 71% 29.5M 1s
14400K .......... .......... .......... .......... .......... 72% 16.9M 1s
14450K .......... .......... .......... .......... .......... 72% 86.5M 1s
14500K .......... .......... .......... .......... .......... 72% 92.5M 1s
14550K .......... .......... .......... .......... .......... 72% 69.2M 1s
14600K .......... .......... .......... .......... .......... 73% 29.6M 1s
14650K .......... .......... .......... .......... .......... 73% 35.0M 1s
14700K .......... .......... .......... .......... .......... 73% 43.7M 1s
14750K .......... .......... .......... .......... .......... 73% 2.08M 1s
14800K .......... .......... .......... .......... .......... 74% 43.0M 1s
14850K .......... .......... .......... .......... .......... 74% 29.9M 1s
14900K .......... .......... .......... .......... .......... 74% 46.1M 1s
14950K .......... .......... .......... .......... .......... 74% 53.0M 1s
15000K .......... .......... .......... .......... .......... 75% 31.8M 1s
15050K .......... .......... .......... .......... .......... 75% 12.0M 1s
15100K .......... .......... .......... .......... .......... 75% 61.9M 0s
15150K .......... .......... .......... .......... .......... 75% 26.1M 0s
15200K .......... .......... .......... .......... .......... 76% 19.0M 0s
15250K .......... .......... .......... .......... .......... 76% 7.58M 0s
15300K .......... .......... .......... .......... .......... 76% 33.9M 0s
15350K .......... .......... .......... .......... .......... 76% 49.7M 0s
15400K .......... .......... .......... .......... .......... 77% 44.0M 0s
15450K .......... .......... .......... .......... .......... 77% 39.7M 0s
15500K .......... .......... .......... .......... .......... 77% 38.1M 0s
15550K .......... .......... .......... .......... .......... 77% 2.86M 0s
15600K .......... .......... .......... .......... .......... 78% 44.8M 0s
15650K .......... .......... .......... .......... .......... 78% 25.4M 0s
15700K .......... .......... .......... .......... .......... 78% 40.2M 0s
15750K .......... .......... .......... .......... .......... 78% 55.6M 0s
15800K .......... .......... .......... .......... .......... 79% 50.7M 0s
15850K .......... .......... .......... .......... .......... 79% 11.6M 0s
15900K .......... .......... .......... .......... .......... 79% 53.6M 0s
15950K .......... .......... .......... .......... .......... 79% 25.3M 0s
16000K .......... .......... .......... .......... .......... 80% 20.1M 0s
16050K .......... .......... .......... .......... .......... 80% 7.77M 0s
16100K .......... .......... .......... .......... .......... 80% 50.3M 0s
16150K .......... .......... .......... .......... .......... 80% 19.3M 0s
16200K .......... .......... .......... .......... .......... 81% 36.1M 0s
16250K .......... .......... .......... .......... .......... 81% 73.3M 0s
16300K .......... .......... .......... .......... .......... 81% 22.4M 0s
16350K .......... .......... .......... .......... .......... 81% 1.41M 0s
16400K .......... .......... .......... .......... .......... 82% 77.2M 0s
16450K .......... .......... .......... .......... .......... 82% 86.6M 0s
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2016-12-14 09:25:44 (10.7 MB/s) - `openbabel-2.3.2.tar.gz.1' saved [20509105/20509105]
tar zxvf openbabel-2.3.2.tar.gz
openbabel-2.3.2/
openbabel-2.3.2/AUTHORS
openbabel-2.3.2/ChangeLog
openbabel-2.3.2/ChangeLog.1.x
openbabel-2.3.2/cmake/
openbabel-2.3.2/CMakeLists.txt
openbabel-2.3.2/COPYING
openbabel-2.3.2/CTestConfig.cmake
openbabel-2.3.2/data/
openbabel-2.3.2/doc/
openbabel-2.3.2/Doxyfile
openbabel-2.3.2/include/
openbabel-2.3.2/INSTALL
openbabel-2.3.2/NEWS
openbabel-2.3.2/openbabel-2.0.pc.cmake
openbabel-2.3.2/OpenBabel2Config.cmake.in
openbabel-2.3.2/OpenBabel2ConfigVersion.cmake.in
openbabel-2.3.2/README
openbabel-2.3.2/scripts/
openbabel-2.3.2/src/
openbabel-2.3.2/test/
openbabel-2.3.2/THANKS
openbabel-2.3.2/tools/
openbabel-2.3.2/windows-vc2008/
openbabel-2.3.2/windows-vc2008/default_build.bat
openbabel-2.3.2/windows-vc2008/Distribution/
openbabel-2.3.2/windows-vc2008/include/
openbabel-2.3.2/windows-vc2008/libs/
openbabel-2.3.2/windows-vc2008/minimal_build.bat
openbabel-2.3.2/windows-vc2008/obdepict.bat
openbabel-2.3.2/windows-vc2008/sdf.bat
openbabel-2.3.2/windows-vc2008/x64_default_build.bat
openbabel-2.3.2/windows-vc2008/libs/i386/
openbabel-2.3.2/windows-vc2008/libs/x64/
openbabel-2.3.2/windows-vc2008/libs/x64/env.bat
openbabel-2.3.2/windows-vc2008/libs/x64/libiconv.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libinchi.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libinchi.lib
openbabel-2.3.2/windows-vc2008/libs/x64/libxml2.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libxml2.lib
openbabel-2.3.2/windows-vc2008/libs/x64/readme.txt
openbabel-2.3.2/windows-vc2008/libs/x64/zlib1.dll
openbabel-2.3.2/windows-vc2008/libs/x64/zlib1.lib
openbabel-2.3.2/windows-vc2008/libs/i386/cairo.lib
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openbabel-2.3.2/windows-vc2008/libs/i386/freetype6.dll
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openbabel-2.3.2/windows-vc2008/libs/i386/libinchi.lib
openbabel-2.3.2/windows-vc2008/libs/i386/libpng14-14.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libxml2.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libxml2.lib
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openbabel-2.3.2/windows-vc2008/libs/i386/xdr-0.dll
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openbabel-2.3.2/windows-vc2008/libs/i386/zlib1.dll
openbabel-2.3.2/windows-vc2008/libs/i386/zlib1.lib
openbabel-2.3.2/windows-vc2008/include/cairo/
openbabel-2.3.2/windows-vc2008/include/inttypes.h
openbabel-2.3.2/windows-vc2008/include/rpc/
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openbabel-2.3.2/windows-vc2008/include/rpc/types.h
openbabel-2.3.2/windows-vc2008/include/rpc/xdr.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-deprecated.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-features.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-ft.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-gobject.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-pdf.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-ps.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-script-interpreter.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-svg.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-version.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-win32.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo.h
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openbabel-2.3.2/windows-vc2008/Distribution/NSISScriptToCreateInstaller.nsi
openbabel-2.3.2/windows-vc2008/Distribution/obdotnet.snk
openbabel-2.3.2/windows-vc2008/Distribution/OBDotNetAssemblyInfo.cs
openbabel-2.3.2/windows-vc2008/Distribution/Python/
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openbabel-2.3.2/tools/babel.cpp
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openbabel-2.3.2/tools/getopt.c
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openbabel-2.3.2/tools/obchiral.cpp
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openbabel-2.3.2/tools/obdoc.cpp
openbabel-2.3.2/tools/obenergy.cpp
openbabel-2.3.2/tools/obfit.cpp
openbabel-2.3.2/tools/obfragment.cpp
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openbabel-2.3.2/tools/obgrep.cpp
openbabel-2.3.2/tools/obminimize.cpp
openbabel-2.3.2/tools/obmm.cpp
openbabel-2.3.2/tools/obprobe.cpp
openbabel-2.3.2/tools/obprop.cpp
openbabel-2.3.2/tools/obrms.cpp
openbabel-2.3.2/tools/obrotamer.cpp
openbabel-2.3.2/tools/obrotate.cpp
openbabel-2.3.2/tools/obseq.cpp
openbabel-2.3.2/tools/obspectrophore.cpp
openbabel-2.3.2/tools/obsym.cpp
openbabel-2.3.2/tools/obxyz.cpp
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openbabel-2.3.2/test/automorphismtest.cpp
openbabel-2.3.2/test/bond.cpp
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openbabel-2.3.2/test/canonconsistenttest.cpp
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openbabel-2.3.2/test/ffgaff.cpp
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openbabel-2.3.2/test/internalcoord.cpp
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openbabel-2.3.2/test/files/ziptest.sdf.gz
openbabel-2.3.2/test/files/stereo/adamantanediol.mol
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cd openbabel-2.3.2/
mkdir build
mkdir: cannot create directory `build': File exists
cd build/
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install ..
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openbabel-2.3.2/doc/API/html/search/variables_64.html
openbabel-2.3.2/doc/API/html/search/variables_65.html
openbabel-2.3.2/doc/API/html/search/variables_66.html
openbabel-2.3.2/doc/API/html/search/variables_67.html
openbabel-2.3.2/doc/API/html/search/variables_68.html
openbabel-2.3.2/doc/API/html/search/variables_69.html
openbabel-2.3.2/doc/API/html/search/variables_6c.html
openbabel-2.3.2/doc/API/html/search/variables_6d.html
openbabel-2.3.2/doc/API/html/search/variables_6e.html
openbabel-2.3.2/doc/API/html/search/variables_6f.html
openbabel-2.3.2/doc/API/html/search/variables_70.html
openbabel-2.3.2/doc/API/html/search/variables_71.html
openbabel-2.3.2/doc/API/html/search/variables_72.html
openbabel-2.3.2/doc/API/html/search/variables_73.html
openbabel-2.3.2/doc/API/html/search/variables_74.html
openbabel-2.3.2/doc/API/html/search/variables_76.html
openbabel-2.3.2/doc/API/html/search/variables_77.html
openbabel-2.3.2/doc/API/html/search/variables_78.html
openbabel-2.3.2/doc/API/html/search/variables_79.html
openbabel-2.3.2/doc/API/html/search/variables_7a.html
openbabel-2.3.2/data/aromatic.h
openbabel-2.3.2/data/aromatic.txt
openbabel-2.3.2/data/atomtyp.h
openbabel-2.3.2/data/atomtyp.txt
openbabel-2.3.2/data/babel_povray3.inc
openbabel-2.3.2/data/bin2hex.pl
openbabel-2.3.2/data/bondtyp.h
openbabel-2.3.2/data/bondtyp.txt
openbabel-2.3.2/data/CMakeLists.txt
openbabel-2.3.2/data/element.h
openbabel-2.3.2/data/element.txt
openbabel-2.3.2/data/fragments.txt
openbabel-2.3.2/data/gaff.dat
openbabel-2.3.2/data/gaff.prm
openbabel-2.3.2/data/genheaders.sh
openbabel-2.3.2/data/ghemical.prm
openbabel-2.3.2/data/isotope-small.txt
openbabel-2.3.2/data/isotope.h
openbabel-2.3.2/data/isotope.txt
openbabel-2.3.2/data/logp.txt
openbabel-2.3.2/data/MACCS.txt
openbabel-2.3.2/data/mm2.prm
openbabel-2.3.2/data/mmff94.ff
openbabel-2.3.2/data/mmff94s.ff
openbabel-2.3.2/data/mmffang.par
openbabel-2.3.2/data/mmffbndk.par
openbabel-2.3.2/data/mmffbond.par
openbabel-2.3.2/data/mmffchg.par
openbabel-2.3.2/data/mmffdef.par
openbabel-2.3.2/data/mmffdfsb.par
openbabel-2.3.2/data/mmffoop.par
openbabel-2.3.2/data/mmffpbci.par
openbabel-2.3.2/data/mmffprop.par
openbabel-2.3.2/data/mmffs_oop.par
openbabel-2.3.2/data/mmffs_tor.par
openbabel-2.3.2/data/mmffstbn.par
openbabel-2.3.2/data/mmfftor.par
openbabel-2.3.2/data/mmffvdw.par
openbabel-2.3.2/data/mpC.txt
openbabel-2.3.2/data/mr.txt
openbabel-2.3.2/data/patterns.txt
openbabel-2.3.2/data/phmodel.txt
openbabel-2.3.2/data/phmodeldata.h
openbabel-2.3.2/data/plugindefines.txt
openbabel-2.3.2/data/psa.txt
openbabel-2.3.2/data/qeq.txt
openbabel-2.3.2/data/resdata.h
openbabel-2.3.2/data/resdata.txt
openbabel-2.3.2/data/ringtyp.txt
openbabel-2.3.2/data/SMARTS_InteLigand.txt
openbabel-2.3.2/data/space-groups.txt
openbabel-2.3.2/data/space-groups.xsl
openbabel-2.3.2/data/splash.png
openbabel-2.3.2/data/superatom.txt
openbabel-2.3.2/data/svgformat.script
openbabel-2.3.2/data/templates.sdf
openbabel-2.3.2/data/torlib.h
openbabel-2.3.2/data/torlib.txt
openbabel-2.3.2/data/types.h
openbabel-2.3.2/data/types.txt
openbabel-2.3.2/data/UFF.prm
openbabel-2.3.2/cmake/modules/
openbabel-2.3.2/cmake/modules/FindCairo.cmake
openbabel-2.3.2/cmake/modules/FindEigen2.cmake
openbabel-2.3.2/cmake/modules/FindEigen3.cmake
openbabel-2.3.2/cmake/modules/FindInchi.cmake
openbabel-2.3.2/cmake/modules/MacroEnsureVersion.cmake
openbabel-2.3.2/cmake/modules/UsePythonTest.cmake
-- Using included inchi library.
-- Could NOT find wxWidgets (missing: wxWidgets_FOUND)
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
-- Could NOT find Eigen2 (missing: EIGEN2_INCLUDE_DIR EIGEN2_VERSION_OK) (Required is at least version "2.0.0")
-- Cairo found. PNG output will be supported.
CMake Warning (dev) at test/CMakeLists.txt:171 (include):
Syntax Warning in cmake code at
/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14
Argument not separated from preceding token by whitespace.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at test/CMakeLists.txt:171 (include):
Syntax Warning in cmake code at
/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31
Argument not separated from preceding token by whitespace.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at test/CMakeLists.txt:171 (include):
Syntax Warning in cmake code at
/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25
Argument not separated from preceding token by whitespace.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at test/CMakeLists.txt:171 (include):
Syntax Warning in cmake code at
/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39
Argument not separated from preceding token by whitespace.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
Policy CMP0053 is not set: Simplify variable reference and escape sequence
evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the
cmake_policy command to set the policy and suppress this warning.
For input:
'
SET(ENV{PYTHONPATH} ${pyenv})
SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} ${ob_libdir})
SET(ENV{BABEL_DATADIR} ${ob_datadir})
MESSAGE(\"${pyenv}\")
EXECUTE_PROCESS(
COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
the old evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py
#WORKING_DIRECTORY
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
but the new evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
Policy CMP0053 is not set: Simplify variable reference and escape sequence
evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the
cmake_policy command to set the policy and suppress this warning.
For input:
'
SET(ENV{PYTHONPATH} ${pyenv})
SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} ${ob_libdir})
SET(ENV{BABEL_DATADIR} ${ob_datadir})
MESSAGE(\"${pyenv}\")
EXECUTE_PROCESS(
COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
the old evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py
#WORKING_DIRECTORY
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
but the new evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Attempting to build the GUI
-- wxWidgets not found => GUI will not be built
CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
Policy CMP0053 is not set: Simplify variable reference and escape sequence
evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the
cmake_policy command to set the policy and suppress this warning.
For input:
'
SET(ENV{PYTHONPATH} ${pyenv})
SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} ${ob_libdir})
SET(ENV{BABEL_DATADIR} ${ob_datadir})
MESSAGE(\"${pyenv}\")
EXECUTE_PROCESS(
COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
the old evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py
#WORKING_DIRECTORY
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
but the new evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
Policy CMP0053 is not set: Simplify variable reference and escape sequence
evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the
cmake_policy command to set the policy and suppress this warning.
For input:
'
SET(ENV{PYTHONPATH} ${pyenv})
SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} ${ob_libdir})
SET(ENV{BABEL_DATADIR} ${ob_datadir})
MESSAGE(\"${pyenv}\")
EXECUTE_PROCESS(
COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
the old evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py
#WORKING_DIRECTORY
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
but the new evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
Policy CMP0053 is not set: Simplify variable reference and escape sequence
evaluation. Run "cmake --help-policy CMP0053" for policy details. Use the
cmake_policy command to set the policy and suppress this warning.
For input:
'
SET(ENV{PYTHONPATH} ${pyenv})
SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} ${ob_libdir})
SET(ENV{BABEL_DATADIR} ${ob_datadir})
MESSAGE(\"${pyenv}\")
EXECUTE_PROCESS(
COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
the old evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py
#WORKING_DIRECTORY
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
but the new evaluation rules produce:
'
SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
EXECUTE_PROCESS(
COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py
#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
RESULT_VARIABLE import_res
OUTPUT_VARIABLE import_output
ERROR_VARIABLE import_output
)
# Pass the output back to ctest
IF(import_output)
MESSAGE('
Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring done
nice make -j8
-- Generating done
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build
[ 31%] Built target inchi
[ 33%] Built target openbabel
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make install
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Install the project...
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/babelconfig.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/pkgconfig/openbabel-2.0.pc
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2_EXPORTS-relwithdebinfo.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2Config.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/inchi/inchi_api.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chemdrawcdx.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bond.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/isomorphism.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/conformersearch.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/pointgroup.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/residue.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/xml.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/optransform.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/atomclass.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/format.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/matrix.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/builder.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/ring.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/groupcontrib.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/reaction.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/griddata.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/spectrophore.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/generic.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bitvec.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/oberror.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/mcdlutil.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chains.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/base.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/lineend.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chiral.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/descriptor.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/internalcoord.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/grid.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/molchrg.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/kinetics.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/text.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/parsmart.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rotamer.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/canon.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/shared_ptr.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/inchiformat.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obmolecformat.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rotor.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/atom.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/locale.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/graphsym.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obconversion.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/mol.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/tokenst.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/plugin.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chargemodel.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/fingerprint.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/patty.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/dlhandler.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rand.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/forcefield.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/alias.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/query.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obutil.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/op.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obiter.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/phmodel.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/data.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/typer.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bondtyper.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/transform3d.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/vector3.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/matrix3x3.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/erf.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/align.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/spacegroup.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/tetrahedral.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/tetraplanar.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/squareplanar.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/cistrans.h
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/unichemformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/viewmolformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xedformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xyzformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/yasaraformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rxnformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemdrawcdx.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemkinformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rsmiformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xtcformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/png2format.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cdxmlformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pubchem.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xmlformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlreactformat.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so.0.4.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so.0
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/babel
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obabel
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obchiral
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obconformer
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obenergy
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obfit
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgen
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obminimize
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprobe
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprop
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotamer
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib
export CC=cc
export CXX=CC
export FC=ftn
# install plplot library
cd $INSTDIR
git clone git://git.code.sf.net/p/plplot/plplot plplot.git
fatal: destination path 'plplot.git' already exists and is not an empty directory.
cd plplot.git/
mkdir build
mkdir: cannot create directory `build': File exists
cd build
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install ..
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotate
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obspectrophore
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgrep
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/roundtrip
-- CMake version = 3.1.3
-- CMAKE_SYSTEM_NAME = Linux
-- SH_EXECUTABLE = /bin/bash
-- Checking whether system has ANSI C header files
-- ANSI C header files - found
-- SWIG_VERSION = 3.0.7
-- WARNING: Perl module XML::DOM not found
-- Looking for pkg-config - found
-- cxx_compiler_library_pathname_list = /opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3f_mpi.so;/opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3f_threads.so;/opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3f.so;/opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3_mpi.so;/opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3_threads.so;/opt/cray/fftw/3.3.4.7/interlagos/lib/libfftw3.so;/opt/cray/atp/2.0.1/libApp/libAtpSigHandler.so;/opt/cray/atp/2.0.1/libApp/libAtpSigHCommData.a;/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/librca.so;/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib/libfmpich.so;/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib/libmpichcxx.so;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-mpi-io.a;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-posix.a;/sw/xe/darshan/2.3.0/darshan-2.3.0_cle52/lib/libdarshan-stubs.a;/usr/lib64/libz.so;/usr/lib64/librt.so;/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib/libsci_gnu_49_mpi.so;/opt/cray/libsci/16.03.1/GNU/4.9/x86_64/lib/libsci_gnu_49.so;/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib/libmpich_gnu_49.so;/opt/cray/mpt/7.3.3/gni/mpich-gnu/4.9/lib/libmpichcxx_gnu_49.so;/opt/gcc/4.9.3/snos/lib64/libgfortran.so;/opt/gcc/4.9.3/snos/lib64/libquadmath.so;/usr/lib64/libm.so;/usr/lib64/libpthread.so;/opt/gcc/4.9.3/snos/lib64/libstdc++.so;/usr/lib64/libm.so;/usr/lib64/libc.so
-- X11_FOUND = 1
-- X11_INCLUDE_DIR = /usr/include
-- X11_COMPILE_FLAGS = -I/usr/include
-- X11_LIBRARIES = /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so
-- NOTICE: Found: /opt/cray/craype/2.5.4/bin/ftn
-- PYTHON_VERSION = 2.6.9
-- Building Python binding with plsmem() support
-- Start determining consistent system data for Tcl and friends
-- Looking for Tcl - found
-- TCL_INCLUDE_PATH = /usr/include
-- TCL_LIBRARY = /usr/lib64/libtcl8.5.so
-- TCL_STUB_LIBRARY = /usr/lib64/libtclstub8.5.a
-- TCL_LIBRARY_PATH = /usr/lib64
-- Looking for tclsh - found
-- TCL_TCLSH = /usr/bin/tclsh
-- PLPLOT_TCL_VERSION = 8.5.5
-- WARNING: Because Tk is disabled must disable Itk as well
-- Finished determining consistent system data for Tcl and friends
-- checking for module 'pango'
-- found pango, version 1.26.2
-- checking for module 'pangoft2'
-- found pangoft2, version 1.26.2
-- Found LTDL: /usr/lib64/libltdl.so
-- LTDL_INCLUDE_DIR = /usr/include
-- LTDL_LIBRARY_DIR = /usr/lib64
-- LTDL_LIBRARIES = /usr/lib64/libltdl.so
-- checking for module 'pangocairo'
-- found pangocairo, version 1.26.2
-- WARNING: ENABLE_wxwidgets is OFF so setting all wxwidgets devices to OFF.
-- WARNING: ENABLE_ocaml is OFF so disabling Plcairo module and lablgtk2 support
libplplot_LINK_FLAGS = /usr/lib64/libltdl.so;/usr/lib64/libm.so;-lcsirocsa;-lqsastime
-- WARNING: validate target will not be available to check for syntax issues in the PLplot DocBook documentation because onsgmls (or env) was not found.
-- WARNING: Perl modules XML::Parser and/or XML::DOM not available
so cannot check that swig_documentation.i is up to date.
-- ENABLE_itcl: OFF
-- Itcl libraries: plplot;/usr/lib64/libtcl8.5.so
-- TEST_ENVIRONMENT = EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/examples SRC_EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/examples OUTPUT_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/ctest_examples_output_dir VC_CTEST_DIRECTORY=
-- Determine compile and link flags for extXdrawable_demo
-- checking for module 'gtk+-x11-2.0'
-- found gtk+-x11-2.0, version 2.18.9
-- Determine compile and link flags for ext-cairo-test
-- checking for module 'cairo'
-- found cairo, version 1.8.8
Summary of CMake build system results for PLplot
Install location variables which can be set by the user:
CMAKE_INSTALL_PREFIX: /u/system/bwjenkins/rmg-spp/plplot.git/install
CMAKE_INSTALL_EXEC_PREFIX /u/system/bwjenkins/rmg-spp/plplot.git/install
CMAKE_INSTALL_BINDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/bin
CMAKE_INSTALL_DATADIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share
CMAKE_INSTALL_LIBDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib
CMAKE_INSTALL_INCLUDEDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/include
CMAKE_INSTALL_INFODIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/info
CMAKE_INSTALL_MANDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man
Derived install location variables:
DATA_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1
LIB_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib
INCLUDE_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot
BIN_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/bin
TCL_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/tcl
ADA_INCLUDE_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/ada/adainclude/plplotada
ADA_LIB_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/ada/adalib/plplotada
PYTHON_INSTDIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib64/python2.6/site-packages
DRV_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/plplot5.11.1/drivers
DOC_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot
MAN_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man
INFO_DIR /u/system/bwjenkins/rmg-spp/plplot.git/install/share/info
Other important CMake variables:
CMAKE_SYSTEM_NAME: Linux
UNIX: 1
WIN32:
APPLE:
MSVC: (MSVC_VERSION: )
MINGW:
MSYS:
CYGWIN:
BORLAND:
WATCOM:
SWIG_FOUND: 1
PERL_FOUND: TRUE
X11_FOUND: 1
CMAKE_BUILD_TYPE:
CMAKE_C_COMPILER CMAKE_C_FLAGS: /opt/cray/craype/2.5.4/bin/cc
CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS: /opt/cray/craype/2.5.4/bin/CC
CMAKE_Fortran_COMPILER CMAKE_Fortran_FLAGS: /opt/cray/craype/2.5.4/bin/ftn
Target Fortran:
PYTHON_EXECUTABLE: /usr/bin/python
PYTHON_INCLUDE_PATH: /usr/include/python2.6
PYTHON_LIBRARIES: /usr/lib64/libpython2.6.so
NUMPY_INCLUDE_PATH: /usr/lib64/python2.6/site-packages/numpy/core/include/numpy
ENABLE_DYNDRIVERS: ON
DRIVERS_LIST: cairo;mem;null;ps;svg;xfig;xwin
DEVICES_LIST: memcairo;extcairo;pdfcairo;pngcairo;pscairo;epscairo;svgcairo;xcairo;mem;null;ps;svg;xfig;xwin
Library options:
BUILD_SHARED_LIBS: ON PL_DOUBLE: ON
Optional libraries:
PL_HAVE_QHULL: OFF WITH_CSA: ON
PL_HAVE_FREETYPE: PL_HAVE_PTHREAD: ON
HAVE_AGG: HAVE_SHAPELIB: OFF
Language Bindings:
ENABLE_ada: OFF
ENABLE_cxx: ON
ENABLE_d: OFF
ENABLE_f95: ON
ENABLE_java: ON
ENABLE_lua: OFF
ENABLE_ocaml: OFF
ENABLE_octave: OFF
ENABLE_pdl: OFF
ENABLE_python: ON
ENABLE_qt: OFF
ENABLE_pyqt4: OFF
ENABLE_pyqt5: OFF
ENABLE_tcl: ON
ENABLE_itcl: OFF
ENABLE_tk: OFF
ENABLE_itk: OFF
ENABLE_wxwidgets: OFF
-- Configuring done
make
-- Generating done
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/plplot.git/build
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Linking C shared library libplplot.so
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Scanning dependencies of target plplotcxx
[ 14%] Building CXX object bindings/c++/CMakeFiles/plplotcxx.dir/plstream.cc.o
Linking CXX shared library libplplotcxx.so
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make install
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Install the project...
-- Install configuration: ""
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ABOUT
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/AUTHORS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/COPYING.LIB
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ChangeLog.release
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/Copyright
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/FAQ
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/NEWS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/PROBLEMS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.release
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.testing
-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libcsirocsa.so.0.0.1
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.csa
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-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libqsastime.so.0.0.1
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-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplot.so.13.1.2
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-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplotcxx.so.12.0.0
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libplplotcxx.so.12
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot/plstream.h
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/pkgconfig/plplot-tcl.pc
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/tcl/plplot.tcl
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/pkgconfig/plplot-tcl_Main.pc
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-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib64/python2.6/site-packages/_plplotcmodule.so
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/tclIndex
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/README.tcldemos
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/plgrid.tcl
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x21
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x22
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x23
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x24
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x25
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x26
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x27
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x28
--
# install CPU-version of RMG
cd $INSTDIR
wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
--2016-12-14 09:29:17-- http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
Resolving downloads.sourceforge.net... 216.34.181.59
Connecting to downloads.sourceforge.net|216.34.181.59|:80... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://iweb.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz [following]
--2016-12-14 09:29:17-- https://iweb.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
Resolving iweb.dl.sourceforge.net... 192.175.120.182, 2607:f748:10:12::5f:2
Connecting to iweb.dl.sourceforge.net|192.175.120.182|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 42363399 (40M) [application/x-gzip]
Saving to: `rmg-release_2.1.tar.gz.1'
0K .......... .......... .......... .......... .......... 0% 781K 53s
50K .......... .......... .......... .......... .......... 0% 1.49M 40s
100K .......... .......... .......... .......... .......... 0% 1.51M 35s
150K .......... .......... .......... .......... .......... 0% 1.54M 33s
200K .......... .......... .......... .......... .......... 0% 43.4M 27s
250K ...... Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x29
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x30
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x31
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/x33
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/pltcl_standard_examples.in
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/tclsh_standard_examples.in
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/CMakeLists.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.11.1/examples/tcl/mktclIndex
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/pltek.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/plserver.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/pltcl.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.pkg-config
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14450K .......... .......... .......... .......... .......... 35% 82.1M 1s
14500K .......... .......... .......... .......... .......... 35% 81.6M 1s
14550K .......... .......... .......... .......... .......... 35% 87.1M 1s
14600K .......... .......... .......... .......... .......... 35% 82.2M 1s
14650K .......... .......... .......... .......... .......... 35% 66.8M 1s
14700K .......... .......... .......... .......... .......... 35% 69.6M 1s
14750K .......... .......... .......... .......... .......... 35% 59.7M 1s
14800K .......... .......... .......... .......... .......... 35% 49.7M 1s
14850K .......... .......... .......... .......... .......... 36% 80.8M 1s
14900K .......... .......... .......... .......... .......... 36% 85.8M 1s
14950K .......... .......... .......... .......... .......... 36% 86.7M 1s
15000K .......... .......... .......... .......... .......... 36% 85.1M 1s
15050K .......... .......... .......... .......... .......... 36% 77.2M 1s
15100K .......... .......... .......... .......... .......... 36% 83.3M 1s
15150K .......... .......... .......... .......... .......... 36% 85.2M 1s
15200K .......... .......... .......... .......... .......... 36% 64.5M 1s
15250K .......... .......... .......... .......... .......... 36% 60.2M 1s
15300K .......... .......... .......... .......... .......... 37% 87.2M 1s
15350K .......... .......... .......... .......... .......... 37% 102M 1s
15400K .......... .......... .......... .......... .......... 37% 108M 1s
15450K .......... .......... .......... .......... .......... 37% 110M 1s
15500K .......... .......... .......... .......... .......... 37% 110M 1s
15550K .......... .......... .......... .......... .......... 37% 2.27M 1s
15600K .......... .......... .......... .......... .......... 37% 63.9M 1s
15650K .......... .......... .......... .......... .......... 37% 86.1M 1s
15700K .......... .......... .......... .......... .......... 38% 82.8M 1s
15750K .......... .......... .......... .......... .......... 38% 84.9M 1s
15800K .......... .......... .......... .......... .......... 38% 62.6M 1s
15850K .......... .......... .......... .......... .......... 38% 78.4M 1s
15900K .......... .......... .......... .......... .......... 38% 80.9M 1s
15950K .......... .......... .......... .......... .......... 38% 78.1M 1s
16000K .......... .......... .......... .......... .......... 38% 58.1M 1s
16050K .......... .......... .......... .......... .......... 38% 76.8M 1s
16100K .......... .......... .......... .......... .......... 39% 79.2M 1s
16150K .......... .......... .......... .......... .......... 39% 79.1M 1s
16200K .......... .......... .......... .......... .......... 39% 79.0M 1s
16250K .......... .......... .......... .......... .......... 39% 84.2M 1s
16300K .......... .......... .......... .......... .......... 39% 73.1M 1s
16350K .......... .......... .......... .......... .......... 39% 76.8M 1s
16400K .......... .......... .......... .......... .......... 39% 57.0M 1s
16450K .......... .......... .......... .......... .......... 39% 79.5M 1s
16500K .......... .......... .......... .......... .......... 40% 80.4M 1s
16550K .......... .......... .......... .......... .......... 40% 77.0M 1s
16600K .......... .......... .......... .......... .......... 40% 75.2M 1s
16650K .......... .......... .......... .......... .......... 40% 78.5M 1s
16700K .......... .......... .......... .......... .......... 40% 84.9M 1s
16750K .......... .......... .......... .......... .......... 40% 88.9M 1s
16800K .......... .......... .......... .......... .......... 40% 2.30M 1s
16850K .......... .......... .......... .......... .......... 40% 71.7M 1s
16900K .......... .......... .......... .......... .......... 40% 74.4M 1s
16950K .......... .......... .......... .......... .......... 41% 69.2M 1s
17000K .......... .......... .......... .......... .......... 41% 82.3M 1s
17050K .......... .......... .......... .......... .......... 41% 81.5M 1s
17100K .......... .......... .......... .......... .......... 41% 80.1M 1s
17150K .......... .......... .......... .......... .......... 41% 79.9M 1s
17200K .......... .......... .......... .......... .......... 41% 57.6M 1s
17250K .......... .......... .......... .......... .......... 41% 79.1M 1s
17300K .......... .......... .......... .......... .......... 41% 78.7M 1s
17350K .......... .......... .......... .......... .......... 42% 80.4M 1s
17400K .......... .......... .......... .......... .......... 42% 77.2M 1s
17450K .......... .......... .......... .......... .......... 42% 79.7M 1s
17500K .......... .......... .......... .......... .......... 42% 69.2M 1s
17550K .......... .......... .......... .......... .......... 42% 80.7M 1s
17600K .......... .......... .......... .......... .......... 42% 59.3M 1s
17650K .......... .......... .......... .......... .......... 42% 79.4M 1s
17700K .......... .......... .......... .......... .......... 42% 79.4M 1s
17750K .......... .......... .......... .......... .......... 43% 75.3M 1s
17800K .......... .......... .......... .......... .......... 43% 81.0M 1s
17850K .......... .......... .......... .......... .......... 43% 78.7M 1s
17900K .......... .......... .......... .......... .......... 43% 88.9M 1s
17950K .......... .......... .......... .......... .......... 43% 87.0M 1s
18000K .......... .......... .......... .......... .......... 43% 68.2M 1s
18050K .......... .......... .......... .......... .......... 43% 88.2M 1s
18100K .......... .......... .......... .......... .......... 43% 2.34M 1s
18150K .......... .......... .......... .......... .......... 43% 75.6M 1s
18200K .......... .......... .......... .......... .......... 44% 71.1M 1s
18250K .......... .......... .......... .......... .......... 44% 76.8M 1s
18300K .......... .......... .......... .......... .......... 44% 79.0M 1s
18350K .......... .......... .......... .......... .......... 44% 82.3M 1s
18400K .......... .......... .......... .......... .......... 44% 58.4M 1s
18450K .......... .......... .......... .......... .......... 44% 72.0M 1s
18500K .......... .......... .......... .......... .......... 44% 75.9M 1s
18550K .......... .......... .......... .......... .......... 44% 76.3M 1s
18600K .......... .......... .......... .......... .......... 45% 78.2M 1s
18650K .......... .......... .......... .......... .......... 45% 78.1M 1s
18700K .......... .......... .......... .......... .......... 45% 79.2M 1s
18750K .......... .......... .......... .......... .......... 45% 74.0M 1s
18800K .......... .......... .......... .......... .......... 45% 60.5M 1s
18850K .......... .......... .......... .......... .......... 45% 78.2M 1s
18900K .......... .......... .......... .......... .......... 45% 79.3M 1s
18950K .......... .......... .......... .......... .......... 45% 79.6M 1s
19000K .......... .......... .......... .......... .......... 46% 72.3M 1s
19050K .......... .......... .......... .......... .......... 46% 79.2M 1s
19100K .......... .......... .......... .......... .......... 46% 79.0M 1s
19150K .......... .......... .......... .......... .......... 46% 76.4M 1s
19200K .......... .......... .......... .......... .......... 46% 66.3M 1s
19250K .......... .......... .......... .......... .......... 46% 93.3M 1s
19300K .......... .......... .......... .......... .......... 46% 87.2M 1s
19350K .......... .......... .......... .......... .......... 46% 89.0M 1s
19400K .......... .......... .......... .......... .......... 47% 2.30M 1s
19450K .......... .......... .......... .......... .......... 47% 72.1M 1s
19500K .......... .......... .......... .......... .......... 47% 83.7M 1s
19550K .......... .......... .......... .......... .......... 47% 77.1M 1s
19600K .......... .......... .......... .......... .......... 47% 61.9M 1s
19650K .......... .......... .......... .......... .......... 47% 77.3M 1s
19700K .......... .......... .......... .......... .......... 47% 85.7M 1s
19750K .......... .......... .......... .......... .......... 47% 85.8M 1s
19800K .......... .......... .......... .......... .......... 47% 86.5M 1s
19850K .......... .......... .......... .......... .......... 48% 87.1M 1s
19900K .......... .......... .......... .......... .......... 48% 81.0M 1s
19950K .......... .......... .......... .......... .......... 48% 77.8M 1s
20000K .......... .......... .......... .......... .......... 48% 59.4M 1s
20050K .......... .......... .......... .......... .......... 48% 88.8M 1s
20100K .......... .......... .......... .......... .......... 48% 73.8M 1s
20150K .......... .......... .......... .......... .......... 48% 72.9M 1s
20200K .......... .......... .......... .......... .......... 48% 74.3M 1s
20250K .......... .......... .......... .......... .......... 49% 74.7M 1s
20300K .......... .......... .......... .......... .......... 49% 81.9M 1s
20350K .......... .......... .......... .......... .......... 49% 76.9M 1s
20400K .......... .......... .......... .......... .......... 49% 57.1M 1s
20450K .......... .......... .......... .......... .......... 49% 83.6M 1s
20500K .......... .......... .......... .......... .......... 49% 89.3M 1s
20550K .......... .......... .......... .......... .......... 49% 84.3M 1s
20600K .......... .......... .......... .......... .......... 49% 85.8M 1s
20650K .......... .......... .......... .......... .......... 50% 87.5M 1s
20700K .......... .......... .......... .......... .......... 50% 2.31M 1s
20750K .......... .......... .......... .......... .......... 50% 74.1M 1s
20800K .......... .......... .......... .......... .......... 50% 53.9M 1s
20850K .......... .......... .......... .......... .......... 50% 76.2M 1s
20900K .......... .......... .......... .......... .......... 50% 76.4M 1s
20950K .......... .......... .......... .......... .......... 50% 70.3M 1s
21000K .......... .......... .......... .......... .......... 50% 78.5M 1s
21050K .......... .......... .......... .......... .......... 51% 80.0M 1s
21100K .......... .......... .......... .......... .......... 51% 79.1M 1s
21150K .......... .......... .......... .......... .......... 51% 77.4M 1s
21200K .......... .......... .......... .......... .......... 51% 54.8M 1s
21250K .......... .......... .......... .......... .......... 51% 77.5M 1s
21300K .......... .......... .......... .......... .......... 51% 77.4M 1s
21350K .......... .......... .......... .......... .......... 51% 77.7M 1s
21400K .......... .......... .......... .......... .......... 51% 79.6M 1s
21450K .......... .......... .......... .......... .......... 51% 81.5M 1s
21500K .......... .......... .......... .......... .......... 52% 69.6M 1s
21550K .......... .......... .......... .......... .......... 52% 79.9M 1s
21600K .......... .......... .......... .......... .......... 52% 64.5M 1s
21650K .......... .......... .......... .......... .......... 52% 88.9M 1s
21700K .......... .......... .......... .......... .......... 52% 88.7M 1s
21750K .......... .......... .......... .......... .......... 52% 86.7M 1s
21800K .......... .......... .......... .......... .......... 52% 83.2M 1s
21850K .......... .......... .......... .......... .......... 52% 89.4M 1s
21900K .......... .......... .......... .......... .......... 53% 87.3M 1s
21950K .......... .......... .......... .......... .......... 53% 88.3M 1s
22000K .......... .......... .......... .......... .......... 53% 2.54M 1s
22050K .......... .......... .......... .......... .......... 53% 83.0M 1s
22100K .......... .......... .......... .......... .......... 53% 79.5M 1s
22150K .......... .......... .......... .......... .......... 53% 85.3M 1s
22200K .......... .......... .......... .......... .......... 53% 87.7M 1s
22250K .......... .......... .......... .......... .......... 53% 78.2M 1s
22300K .......... .......... .......... .......... .......... 54% 81.7M 1s
22350K .......... .......... .......... .......... .......... 54% 78.4M 1s
22400K .......... .......... .......... .......... .......... 54% 61.7M 1s
22450K .......... .......... .......... .......... .......... 54% 87.0M 1s
22500K .......... .......... .......... .......... .......... 54% 83.7M 1s
22550K .......... .......... .......... .......... .......... 54% 87.4M 1s
22600K .......... .......... .......... .......... .......... 54% 83.4M 1s
22650K .......... .......... .......... .......... .......... 54% 86.7M 1s
22700K .......... .......... .......... .......... .......... 54% 83.3M 1s
22750K .......... .......... .......... .......... .......... 55% 84.6M 1s
22800K .......... .......... .......... .......... .......... 55% 65.0M 1s
22850K .......... .......... .......... .......... .......... 55% 84.5M 1s
22900K .......... .......... .......... .......... .......... 55% 84.2M 1s
22950K .......... .......... .......... .......... .......... 55% 80.5M 1s
23000K .......... .......... .......... .......... .......... 55% 70.5M 1s
23050K .......... .......... .......... .......... .......... 55% 104M 1s
23100K .......... .......... .......... .......... .......... 55% 107M 1s
23150K .......... .......... .......... .......... .......... 56% 109M 1s
23200K .......... .......... .......... .......... .......... 56% 81.0M 1s
23250K .......... .......... .......... .......... .......... 56% 2.21M 1s
23300K .......... .......... .......... .......... .......... 56% 87.1M 1s
23350K .......... .......... .......... .......... .......... 56% 93.5M 1s
23400K .......... .......... .......... .......... .......... 56% 89.9M 1s
23450K .......... .......... .......... .......... .......... 56% 100M 1s
23500K .......... .......... .......... .......... .......... 56% 104M 1s
23550K .......... .......... .......... .......... .......... 57% 93.9M 1s
23600K .......... .......... .......... .......... .......... 57% 70.2M 1s
23650K .......... .......... .......... .......... .......... 57% 95.1M 1s
23700K .......... .......... .......... .......... .......... 57% 98.0M 1s
23750K .......... .......... .......... .......... .......... 57% 105M 1s
23800K .......... .......... .......... .......... .......... 57% 102M 1s
23850K .......... .......... .......... .......... .......... 57% 69.1M 1s
23900K .......... .......... .......... .......... .......... 57% 78.4M 1s
23950K .......... .......... .......... .......... .......... 58% 71.7M 1s
24000K .......... .......... .......... .......... .......... 58% 58.8M 1s
24050K .......... .......... .......... .......... .......... 58% 78.3M 1s
24100K .......... .......... .......... .......... .......... 58% 79.5M 1s
24150K .......... .......... .......... .......... .......... 58% 79.2M 1s
24200K .......... .......... .......... .......... .......... 58% 68.2M 1s
24250K .......... .......... .......... .......... .......... 58% 78.3M 1s
24300K .......... .......... .......... .......... .......... 58% 79.2M 1s
24350K .......... .......... .......... .......... .......... 58% 84.0M 1s
24400K .......... .......... .......... .......... .......... 59% 68.4M 1s
24450K .......... .......... .......... .......... .......... 59% 86.7M 1s
24500K .......... .......... .......... .......... .......... 59% 86.1M 1s
24550K .......... .......... .......... .......... .......... 59% 2.20M 1s
24600K .......... .......... .......... .......... .......... 59% 75.1M 1s
24650K .......... .......... .......... .......... .......... 59% 77.3M 1s
24700K .......... .......... .......... .......... .......... 59% 77.6M 1s
24750K .......... .......... .......... .......... .......... 59% 79.2M 1s
24800K .......... .......... .......... .......... .......... 60% 57.4M 1s
24850K .......... .......... .......... .......... .......... 60% 78.5M 1s
24900K .......... .......... .......... .......... .......... 60% 79.1M 1s
24950K .......... .......... .......... .......... .......... 60% 79.2M 1s
25000K .......... .......... .......... .......... .......... 60% 77.2M 1s
25050K .......... .......... .......... .......... .......... 60% 71.1M 1s
25100K .......... .......... .......... .......... .......... 60% 77.2M 1s
25150K .......... .......... .......... .......... .......... 60% 77.3M 1s
25200K .......... .......... .......... .......... .......... 61% 59.4M 1s
25250K .......... .......... .......... .......... .......... 61% 77.7M 1s
25300K .......... .......... .......... .......... .......... 61% 75.2M 1s
25350K .......... .......... .......... .......... .......... 61% 70.1M 1s
25400K .......... .......... .......... .......... .......... 61% 74.9M 1s
25450K .......... .......... .......... .......... .......... 61% 76.3M 1s
25500K .......... .......... .......... .......... .......... 61% 77.1M 1s
25550K .......... .......... .......... .......... .......... 61% 74.0M 1s
25600K .......... .......... .......... .......... .......... 62% 64.7M 1s
25650K .......... .......... .......... .......... .......... 62% 87.8M 1s
25700K .......... .......... .......... .......... .......... 62% 87.6M 1s
25750K .......... .......... .......... .......... .......... 62% 89.0M 1s
25800K .......... .......... .......... .......... .......... 62% 87.8M 1s
25850K .......... .......... .......... .......... .......... 62% 2.35M 1s
25900K .......... .......... .......... .......... .......... 62% 81.4M 1s
25950K .......... .......... .......... .......... .......... 62% 78.7M 1s
26000K .......... .......... .......... .......... .......... 62% 59.7M 1s
26050K .......... .......... .......... .......... .......... 63% 82.2M 1s
26100K .......... .......... .......... .......... .......... 63% 85.5M 1s
26150K .......... .......... .......... .......... .......... 63% 85.2M 1s
26200K .......... .......... .......... .......... .......... 63% 89.4M 1s
26250K .......... .......... .......... .......... .......... 63% 91.7M 1s
26300K .......... .......... .......... .......... .......... 63% 81.5M 1s
26350K .......... .......... .......... .......... .......... 63% 80.0M 1s
26400K .......... .......... .......... .......... .......... 63% 63.7M 1s
26450K .......... .......... .......... .......... .......... 64% 85.8M 1s
26500K .......... .......... .......... .......... .......... 64% 87.4M 1s
26550K .......... .......... .......... .......... .......... 64% 86.1M 1s
26600K .......... .......... .......... .......... .......... 64% 78.7M 1s
26650K .......... .......... .......... .......... .......... 64% 82.1M 1s
26700K .......... .......... .......... .......... .......... 64% 87.1M 1s
26750K .......... .......... .......... .......... .......... 64% 82.0M 1s
26800K .......... .......... .......... .......... .......... 64% 63.9M 1s
26850K .......... .......... .......... .......... .......... 65% 86.2M 1s
26900K .......... .......... .......... .......... .......... 65% 90.5M 1s
26950K .......... .......... .......... .......... .......... 65% 88.1M 1s
27000K .......... .......... .......... .......... .......... 65% 87.5M 1s
27050K .......... .......... .......... .......... .......... 65% 89.3M 1s
27100K .......... .......... .......... .......... .......... 65% 87.4M 1s
27150K .......... .......... .......... .......... .......... 65% 2.19M 1s
27200K .......... .......... .......... .......... .......... 65% 51.9M 1s
27250K .......... .......... .......... .......... .......... 65% 76.6M 1s
27300K .......... .......... .......... .......... .......... 66% 75.2M 1s
27350K .......... .......... .......... .......... .......... 66% 76.6M 1s
27400K .......... .......... .......... .......... .......... 66% 73.8M 1s
27450K .......... .......... .......... .......... .......... 66% 66.9M 1s
27500K .......... .......... .......... .......... .......... 66% 77.7M 1s
27550K .......... .......... .......... .......... .......... 66% 80.0M 1s
27600K .......... .......... .......... .......... .......... 66% 59.6M 1s
27650K .......... .......... .......... .......... .......... 66% 78.3M 1s
27700K .......... .......... .......... .......... .......... 67% 77.2M 1s
27750K .......... .......... .......... .......... .......... 67% 71.4M 1s
27800K .......... .......... .......... .......... .......... 67% 77.9M 1s
27850K .......... .......... .......... .......... .......... 67% 78.8M 1s
27900K .......... .......... .......... .......... .......... 67% 72.6M 1s
27950K .......... .......... .......... .......... .......... 67% 79.6M 1s
28000K .......... .......... .......... .......... .......... 67% 59.9M 1s
28050K .......... .......... .......... .......... .......... 67% 82.7M 1s
28100K .......... .......... .......... .......... .......... 68% 86.5M 1s
28150K .......... .......... .......... .......... .......... 68% 88.2M 1s
28200K .......... .......... .......... .......... .......... 68% 89.9M 1s
28250K .......... .......... .......... .......... .......... 68% 89.2M 1s
28300K .......... .......... .......... .......... .......... 68% 90.2M 1s
28350K .......... .......... .......... .......... .......... 68% 84.5M 1s
28400K .......... .......... .......... .......... .......... 68% 2.32M 1s
28450K .......... .......... .......... .......... .......... 68% 57.2M 1s
28500K .......... .......... .......... .......... .......... 69% 73.4M 1s
28550K .......... .......... .......... .......... .......... 69% 72.5M 1s
28600K .......... .......... .......... .......... .......... 69% 70.6M 1s
28650K .......... .......... .......... .......... .......... 69% 64.6M 1s
28700K .......... .......... .......... .......... .......... 69% 66.4M 1s
28750K .......... .......... .......... .......... .......... 69% 63.2M 1s
28800K .......... .......... .......... .......... .......... 69% 47.9M 1s
28850K .......... .......... .......... .......... .......... 69% 60.8M 1s
28900K .......... .......... .......... .......... .......... 69% 65.5M 1s
28950K .......... .......... .......... .......... .......... 70% 62.4M 1s
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39750K .......... .......... .......... .......... .......... 96% 78.0M 0s
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39950K .......... .......... .......... .......... .......... 96% 72.9M 0s
40000K .......... .......... .......... .......... .......... 96% 2.90M 0s
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40900K .......... .......... .......... .......... .......... 98% 76.9M 0s
40950K .......... .......... .......... .......... .......... 99% 30.0M 0s
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41300K .......... .......... .......... .......... .......... 99% 2.91M 0s
41350K .......... .......... 100% 100M=1.5s
2016-12-14 09:29:19 (26.1 MB/s) - `rmg-release_2.1.tar.gz.1' saved [42363399/42363399]
tar zxvf rmg-release_2.1.tar.gz
rmg-release_2.1/
rmg-release_2.1/XC/
rmg-release_2.1/XC/erf.f90
rmg-release_2.1/XC/vdW_kernel_table
rmg-release_2.1/XC/kind.f90
rmg-release_2.1/XC/lsda_functionals.F90
rmg-release_2.1/XC/matches.f90
rmg-release_2.1/XC/vdw_correlation.cpp
rmg-release_2.1/XC/Functional.cpp
rmg-release_2.1/XC/io_global.f90
rmg-release_2.1/XC/capital.f90
rmg-release_2.1/XC/Makefile
rmg-release_2.1/XC/funct.f90
rmg-release_2.1/XC/constants.f90
rmg-release_2.1/XC/CMakeLists.txt
rmg-release_2.1/XC/expint.f90
rmg-release_2.1/XC/more_functionals.F90
rmg-release_2.1/XC/functionals.F90
rmg-release_2.1/XC/metagga.F90
rmg-release_2.1/XC/CMakeFiles/
rmg-release_2.1/XC/CMakeFiles/CMakeDirectoryInformation.cmake
rmg-release_2.1/XC/CMakeFiles/XC1.dir/
rmg-release_2.1/XC/CMakeFiles/XC1.dir/kind.f90.o.provides.build
rmg-release_2.1/XC/CMakeFiles/XC1.dir/depend.make
rmg-release_2.1/XC/CMakeFiles/XC1.dir/build.make
rmg-release_2.1/XC/CMakeFiles/XC1.dir/flags.make
rmg-release_2.1/XC/CMakeFiles/XC1.dir/CXX.includecache
rmg-release_2.1/XC/CMakeFiles/XC1.dir/funct.f90.o.provides.build
rmg-release_2.1/XC/CMakeFiles/XC1.dir/link.txt
rmg-release_2.1/XC/CMakeFiles/XC1.dir/cmake_clean_target.cmake
rmg-release_2.1/XC/CMakeFiles/XC1.dir/progress.make
rmg-release_2.1/XC/CMakeFiles/XC1.dir/cmake_clean.cmake
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rmg-release_2.1/XC/CMakeFiles/XC1.dir/depend.internal
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rmg-release_2.1/XC/CMakeFiles/XC1.dir/vdw_splines.f90.o.provides.build
rmg-release_2.1/XC/CMakeFiles/XC1.dir/cmake_clean_Fortran.cmake
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rmg-release_2.1/XC/CMakeFiles/progress.marks
rmg-release_2.1/XC/cmake_install.cmake
rmg-release_2.1/XC/vdw_splines.f90
rmg-release_2.1/rmgwin.bat
rmg-release_2.1/make_conf.h.in
rmg-release_2.1/lib/
rmg-release_2.1/lib/spglib-1.6.3.tar.gz
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mkdir build-cpu; cd build-cpu
mkdir: cannot create directory `build-cpu': File exists
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rmg-release_2.1/RmgLib/include/BaseThreadControl.h
rmg-release_2.1/RmgLib/Makefile
rmg-release_2.1/RmgLib/CREDITS
rmg-release_2.1/RmgLib/CMakeLists.txt
rmg-release_2.1/RmgLib/examples/
rmg-release_2.1/RmgLib/examples/Poisson/
rmg-release_2.1/RmgLib/examples/Poisson/poisson_pbc.cpp
rmg-release_2.1/RmgLib/src/
rmg-release_2.1/RmgLib/src/app_grad_driver.cpp
rmg-release_2.1/RmgLib/src/RmgTimer.cpp
rmg-release_2.1/RmgLib/src/Mgrid.cpp
rmg-release_2.1/RmgLib/src/FiniteDiff.cpp
rmg-release_2.1/RmgLib/src/BaseThread.cpp
rmg-release_2.1/RmgLib/src/rmg_error.cpp
rmg-release_2.1/RmgLib/src/TradeImages.cpp
rmg-release_2.1/RmgLib/src/app_cir_driver.cpp
rmg-release_2.1/RmgLib/src/RmgLib.cpp
rmg-release_2.1/RmgLib/src/app_cil_driver.cpp
rmg-release_2.1/RmgLib/src/RmgMaxAll.cpp
rmg-release_2.1/RmgLib/src/get_vh.cpp
rmg-release_2.1/RmgLib/src/packfuncs.cpp
rmg-release_2.1/RmgLib/src/Lattice.cpp
rmg-release_2.1/RmgLib/src/app_cil_driver_threaded.cpp
rmg-release_2.1/RmgLib/src/BaseGrid.cpp
rmg-release_2.1/RmgLib/src/RmgPrintTimings.cpp
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rmg-release_2.1/Finite_diff/app_grad.c
rmg-release_2.1/Finite_diff/AppCilrDriver.cpp
rmg-release_2.1/Finite_diff/app_cir_ortho.c
rmg-release_2.1/Finite_diff/AppCilrSixth.cpp
rmg-release_2.1/Finite_diff/app_cir_bcc.cpp
rmg-release_2.1/Finite_diff/AppCilrFourth.cpp
rmg-release_2.1/Finite_diff/Makefile
rmg-release_2.1/Finite_diff/app_cir_fcc.c
rmg-release_2.1/Finite_diff/CMakeLists.txt
rmg-release_2.1/Finite_diff/ApplyLaplacian.cpp
rmg-release_2.1/Finite_diff/app_cir_bcc.c
rmg-release_2.1/Finite_diff/app_cir_fcc.cpp
rmg-release_2.1/Finite_diff/ApplyAOperator.cpp
rmg-release_2.1/Finite_diff/ApplyBOperator.cpp
rmg-release_2.1/Finite_diff/app_cir_beta_sixth.c
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rmg-release_2.1/Finite_diff/cmake_install.cmake
rmg-release_2.1/Finite_diff/FiniteDiff_Cbindings.cpp
rmg-release_2.1/Force/
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rmg-release_2.1/Force/iiforce.c
rmg-release_2.1/Force/CorrectForces.cpp
rmg-release_2.1/Force/Nlccforce.cpp
rmg-release_2.1/Force/CMakeLists.txt
rmg-release_2.1/Force/Lforce.cpp
rmg-release_2.1/Force/constrain.c
rmg-release_2.1/Force/Force.cpp
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rmg-release_2.1/Headers/
rmg-release_2.1/Headers/Functional.h
rmg-release_2.1/Headers/my_mpi.h
rmg-release_2.1/Headers/GlobalSums.h
rmg-release_2.1/Headers/rmg_xc.h
rmg-release_2.1/Headers/blacs.h
rmg-release_2.1/Headers/BlasWrappers.h
rmg-release_2.1/Headers/vdW.h
rmg-release_2.1/Headers/InputKey.h
rmg-release_2.1/Headers/transition.h
rmg-release_2.1/Headers/fastonebigheader.h
rmg-release_2.1/Headers/ErrorFuncs.h
rmg-release_2.1/Headers/RmgParallelFft.h
rmg-release_2.1/Headers/species.h
rmg-release_2.1/Headers/Kpoint.h
rmg-release_2.1/Headers/portability.h
rmg-release_2.1/Headers/my_scalapack.h
rmg-release_2.1/Headers/Plots.h
rmg-release_2.1/Headers/RmgGemm.h
rmg-release_2.1/Headers/init_var.h
rmg-release_2.1/Headers/CheckValue.h
rmg-release_2.1/Headers/svn-commit.tmp
rmg-release_2.1/Headers/Solvers.h
rmg-release_2.1/Headers/rmg_control.h
rmg-release_2.1/Headers/svnrev.h
rmg-release_2.1/Headers/BesselRoots.h
rmg-release_2.1/Headers/RmgShm.h
rmg-release_2.1/Headers/Subdiag.h
rmg-release_2.1/Headers/mg.h
rmg-release_2.1/Headers/pe_control.h
rmg-release_2.1/Headers/rmgtypedefs.h
rmg-release_2.1/Headers/input.h
rmg-release_2.1/Headers/pack_3d.h
rmg-release_2.1/Headers/Pw.h
rmg-release_2.1/Headers/RmgException.h
rmg-release_2.1/Headers/cnpy.h
rmg-release_2.1/Headers/BesselRoots.h.sav
rmg-release_2.1/Headers/blas.h
rmg-release_2.1/Headers/RmgInputFile.h
rmg-release_2.1/Headers/Atomic.h
rmg-release_2.1/Headers/rmgthreads.h
rmg-release_2.1/Headers/grid.h
rmg-release_2.1/Headers/lbfgs.h
rmg-release_2.1/Headers/common_prototypes.h
rmg-release_2.1/Headers/macros.h
rmg-release_2.1/Headers/make_conf.h
rmg-release_2.1/Headers/GpuAlloc.h
rmg-release_2.1/Headers/InternalPseudo.h
rmg-release_2.1/Headers/common_prototypes1.h
rmg-release_2.1/Headers/State.h
rmg-release_2.1/Headers/main.h
rmg-release_2.1/Headers/rmg_alloc.h
rmg-release_2.1/Headers/const.h
rmg-release_2.1/Headers/typedefs.h
rmg-release_2.1/Headers/remap_3d.h
rmg-release_2.1/Headers/InputOpts.h
rmg-release_2.1/Headers/Scalapack.h
rmg-release_2.1/Headers/RmgThread.h
rmg-release_2.1/Headers/MapElements.h
rmg-release_2.1/Headers/AtomicInterpolate.h
rmg-release_2.1/Headers/params.h
CMake Warning (dev) at SubprojectIncludes/CMakeLists.txt.rmg.inc:5 (add_dependencies):
Policy CMP0046 is not set: Error on non-existent dependency in
add_dependencies. Run "cmake --help-policy CMP0046" for policy details.
Use the cmake_policy command to set the policy and suppress this warning.
The dependency target "libspg" of target "rmg-cpu" does not exist.
Call Stack (most recent call first):
CMakeLists.txt:589 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Boost version: 1.53.0
-- Found the following Boost libraries:
-- thread
-- system
-- iostreams
-- program_options
-- filesystem
-- Configuring done
nice make -j12 rmg-cpu
-- Generating done
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/rmg-release_2.1/build-cpu
[ 1%] [ 1%] Built target InternalPseudo
Built target MG
[ 7%] [ 7%] Built target XC1
Built target Force
[ 11%] Built target RMG_Spin
[ 15%] Built target RmgLib
[ 20%] Built target XC
[ 24%] Built target RMG_Subdiag
[ 29%] Built target Finite_diff
[ 34%] Built target Input
[ 40%] Built target RMG_Spin_XC
[ 49%] Built target US_PP
[ 72%] Built target Misc
[ 98%] Built target RMG_Common
Linking CXX executable rmg-cpu
rm -rf ~/scratch/rmg-spp
[100%] Built target rmg-cpu
mkdir -p ~/scratch/rmg-spp
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/
cd ~/scratch/rmg-spp
cat run.pbs | grep -v aprun > myrun.pbs
echo "aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs
cat -n myrun.pbs
MYJOBID=`qsub myrun.pbs`
qsub myrun.pbs
1 #!/bin/bash
2 #PBS -N z302water_cpu100
3 #PBS -j oe
4 #PBS -l walltime=00:59:00
5 #PBS -l nodes=100:ppn=32:xe
6 #PBS -q normal
7
8 source /opt/modules/default/init/bash
9 module list
10
11 cd $PBS_O_WORKDIR
12
13 export MPICH_MAX_THREAD_SAFETY=serialized
14 export OMP_WAIT_POLICY=passive
15 export MPICH_ENV_DISPLAY=1
16 ulimit -a
17 export MPICH_GNI_MBOX_PLACEMENT=nic
18 export MPICH_GNI_RDMA_THRESHOLD=1024
19 export MPICH_GNI_NUM_BUFS=512
20 export MPICH_GNI_MAX_EAGER_MSG_SIZE=65536
21 export OMP_NUM_THREADS=4
22
23 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/u/staff/anisimov/rmg/openbabel-2.3.2/build/lib
24
25
26 aprun -n 400 -N 4 -d 8 -cc numa_node ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu
Job submitted to account: jnc
echo MYJOBID=$MYJOBID
~arnoldg/ior/wait_for.sh $MYJOBID
MYJOBID=5882908.bw
=== RUNNING /u/staff/arnoldg/ior/wait_for.sh ===
Wed Dec 14 09:29:55 CST 2016: waiting for 5882908.bw to finish
Wed Dec 14 09:34:55 CST 2016: waiting for 5882908.bw to finish
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Wed Dec 14 14:20:21 CST 2016: waiting for 5882908.bw to finish
qstat: Unknown Job Id Error 5882908.bw
tail *.log > ~/rmg-spp/rmg.logtail.txt
5882908.bw finished
[SSH] exit-status: 0
[rmg-spp] $ /bin/sh -xe /tmp/hudson6956427030145841578.sh
+ scp 'BW_REMOTE:~/rmg-spp/*.txt' /var/lib/jenkins/workspace/rmg-spp
Access by OTP or Two Factor Certificate Authority only.
Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access.
gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access.
Blue Water Admin Team
Finished: SUCCESS