Started by user rhaas
Building on master in workspace /var/lib/jenkins/workspace/Cactus
Updating https://github.com/rhaas80/SWTools-BWCI/trunk/EinsteinToolkit@HEAD at revision HEAD
UU        2016_05/cle5.2_gnu5.1.0/retest
At revision 35

[Cactus] $ /bin/sh -xe /tmp/hudson1729873512952474863.sh
+ /usr/local/bin/jenkins_sync /var/lib/jenkins/workspace/Cactus/EinsteinToolkit
NCSA JYC System 
Access status: User Access UnRestricted.

Access by OTP or Two Factor Certificate Authority only.
Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access.
gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access.

cannot delete non-empty directory: EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/ET_2016_05/repos/einsteininitialdata
cannot delete non-empty directory: EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/ET_2016_05/repos
cannot delete non-empty directory: EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/ET_2016_05/repos
cannot delete non-empty directory: EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/ET_2016_05
executing script:
SW_CONFIG="/scratch/system/bwjenkins/sw_config"
PYTHONPATH="/sw/tools/bin:/sw/tools/bin:$PYTHONPATH"
SW_WORKDIR="/scratch/system/bwjenkins/sw_workdir"
SW_ROOT="/scratch/system/bwjenkins/tests"
PATH="/sw/tools/bin:/sw/tools/bin:$PATH"

echo $PATH $SW_CONFIG $PYTHONPATH > /dev/null
export SW_CONFIG=$SW_CONFIG

export SW_WORKDIR=$SW_WORKDIR

cd $SW_ROOT
cd EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
pwd -P
swbuildwait
ls -l
/u/staff/rhaas/bin/swtestwait || true
ls -l
# echo -n "YVALUE=" >builderrorcount  && ( grep --count '^error:' <make.log >>builderrorcount || [ $? -eq 1 ] )
# echo -n "YVALUE=" >buildwarningcount  && ( grep --count '^warning:' <make.log >>buildwarningcount || [ $? -eq 1 ] )
/mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
swbuild -s -a EinsteinToolkit -v 2016_05 -b cle5.2_gnu5.1.0
set -e # abort on errors
# clear out old installation to prevent potential libtool chmod 
# commands from failing when reinstalled by another person
rm -rf $ET_SRCDIR
rm: cannot remove `ET_2016_05/repos/carpet/CarpetEvolutionMask/test/CarpetEvolutionMask_test_off': Directory not empty
++ readlink -f .
+ realpath=/mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
++ basename /mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
+ build=cle5.2_gnu5.1.0
++ dirname /mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
+ version_dir=/mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05
++ basename /mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05
+ version=2016_05
++ dirname /mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05
+ app_dir=/mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit
++ basename /mnt/abc/scratch/system/bwjenkins/tests/EinsteinToolkit
+ app=EinsteinToolkit
+ pwd
+ swtest -a EinsteinToolkit -v 2016_05 -b cle5.2_gnu5.1.0 -s --debug
+ tee test.log
['/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05']
/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/rebuild : failed (1)
total 17
-rw-rw-r-- 1 bwjenkins BW_System  439 Sep  1 19:38 build.log
-rw-rw-r-- 1 bwjenkins BW_System  391 Aug 23 09:20 build-notes
drwxrwxr-x 3 bwjenkins BW_System 4096 Sep  1 19:38 ET_2016_05
-rwxrwxr-x 1 bwjenkins BW_System 2550 Aug 30 19:26 rebuild
lrwxrwxrwx 1 bwjenkins BW_System    7 Aug 23 09:20 relink -> rebuild
-rw-rw-r-- 1 bwjenkins BW_System  447 Aug 30 17:18 remodule
-rwxrwxr-x 1 bwjenkins BW_System 2090 Sep  1 19:38 retest
/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0
+ ls -l
+ '[' '!' -e .running ']'
+ echo '.running file does not exist. Failing the test.'
+ exit -1
#clear out status file since re-testing
rm -f status

#cd ${SW_WORKDIR}
cd $ET_SRCDIR
: ${TESTJOBNAME=$ET_VER-swretest-$(date +%s)-$$}
date +%s
simfactory/bin/sim submit --machine bluewaters --testsuite --select-test=CactusWave/WaveToyC --walltime 4:0:0 --procs 8 --num-threads 4 --define SW_BLDDIR $SW_BLDDIR $TESTJOBNAME >submit.log && \
gawk -vrc=1 '/^Submit finished, job id is/{print $6;rc=0;exit} END{exit rc}' <submit.log >$SW_BLDDIR/.running
/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/retest: line 48: simfactory/bin/sim: No such file or directory
cd ..

# qsub returns 0 on successful job launch, so if failure return 1
if [ $? -ne 0 ]; then
  echo "Error submitting job"
  rm -f $SW_BLDDIR/.running
  exit 1
else
  echo "Job submitted"
  cat submit.log
  exit 2
fi
Job submitted
cat: submit.log: No such file or directory
['/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05']
/scratch/system/bwjenkins/tests/EinsteinToolkit/2016_05/cle5.2_gnu5.1.0/retest : batch submitted (2)
total 18
-rw-rw-r-- 1 bwjenkins BW_System  439 Sep  1 19:38 build.log
-rw-rw-r-- 1 bwjenkins BW_System  391 Aug 23 09:20 build-notes
drwxrwxr-x 3 bwjenkins BW_System 4096 Sep  1 19:38 ET_2016_05
-rwxrwxr-x 1 bwjenkins BW_System 2550 Aug 30 19:26 rebuild
lrwxrwxrwx 1 bwjenkins BW_System    7 Aug 23 09:20 relink -> rebuild
-rw-rw-r-- 1 bwjenkins BW_System  447 Aug 30 17:18 remodule
-rwxrwxr-x 1 bwjenkins BW_System 2090 Sep  1 19:38 retest
-rw-rw-r-- 1 bwjenkins BW_System 1022 Sep  1 19:38 test.log
.running file does not exist. Failing the test.
total 18
-rw-rw-r-- 1 bwjenkins BW_System  439 Sep  1 19:38 build.log
-rw-rw-r-- 1 bwjenkins BW_System  391 Aug 23 09:20 build-notes
drwxrwxr-x 3 bwjenkins BW_System 4096 Sep  1 19:38 ET_2016_05
-rwxrwxr-x 1 bwjenkins BW_System 2550 Aug 30 19:26 rebuild
lrwxrwxrwx 1 bwjenkins BW_System    7 Aug 23 09:20 relink -> rebuild
-rw-rw-r-- 1 bwjenkins BW_System  447 Aug 30 17:18 remodule
-rwxrwxr-x 1 bwjenkins BW_System 2090 Sep  1 19:38 retest
-rw-rw-r-- 1 bwjenkins BW_System 1022 Sep  1 19:38 test.log
[SSH] exit-status: 0
[Cactus] $ /bin/sh -xe /tmp/hudson4908692693871518502.sh
Recording plot data
Saving plot series data from: /var/lib/jenkins/workspace/Cactus/builderrorcount
Saving plot series data from: /var/lib/jenkins/workspace/Cactus/buildwarningcount
Finished: SUCCESS