Started by timer Running as SYSTEM Building in workspace /var/lib/jenkins/jobs/osu_reduce/workspace [SSH] script: ~arnoldg/ior/myenv.sh mkdir osureduce-jenkins cd osureduce-jenkins rm -rf * # 1-20-2017 rebuilt osu_reduce below without darshan and with the "profiler" undocumented module echo "#!/bin/bash" > osureduce.pbs echo "#PBS -lnodes=16:ppn=16:xe,walltime=00:05:00 -Nosureduce" >> osureduce.pbs echo "cd ~/osureduce-jenkins; module unload xalt darshan" >> osureduce.pbs echo "aprun -n 256 ~arnoldg/osu-micro-benchmarks-4.2/mpi/collective/osu_reduce -M 4000000 -m 4000000 > osu_reduce.out" >> osureduce.pbs echo "grep 524288 osu_reduce.out | tr -s '[ ]' | cut -d' ' -f2 > osureduce.datB" >> osureduce.pbs echo "echo YVALUE= > osureduce.datA" >> osureduce.pbs echo "paste osureduce.datA osureduce.datB > osureduce.dat" >> osureduce.pbs echo "aprun -n 16 -N 1 hostname > stream-compute-node" >> osureduce.pbs cat -n osureduce.pbs MYJOBID=`qsub osureduce.pbs` echo MYJOBID=$MYJOBID ~arnoldg/ior/wait_for.sh $MYJOBID echo "=== JOB RAN ON ===" cat ~/osureduce-jenkins/stream-compute-node rm -f ~/osureduce-jenkins/stream-compute-node [SSH] executing... mkdir: cannot create directory `osureduce-jenkins': File exists === RUNNING /u/staff/arnoldg/ior/myenv.sh === HOST=jyc1 HOME=/u/system/bwjenkins SCRATCH=/u/system/bwjenkins/scratch ls SCRATCH: mdtest setsm_benchmark SPP-PPM stripe8 sw_config sw_workdir test.log tests my id: uid=49294(bwjenkins) gid=16228(BW_System) groups=16228(BW_System),999(login_user),1000(ie_user),1001(hpss_user),1009(swtools),16237(jnd) Currently Loaded Modulefiles: 1) modules/3.2.10.5 2) nodestat/2.2-1.0502.60539.1.31.gem 3) sdb/1.1-1.0502.63652.4.27.gem 4) alps/5.2.4-2.0502.9774.31.12.gem 5) lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.45.1-1.0502.21728.75.4 6) udreg/2.3.2-1.0502.10518.2.17.gem 7) ugni/6.0-1.0502.10863.8.28.gem 8) gni-headers/4.0-1.0502.10859.9.27.gem 9) dmapp/7.0.1-1.0502.11080.8.74.gem 10) xpmem/0.1-2.0502.64982.7.27.gem 11) hss-llm/7.2.0 12) Base-opts/1.0.2-1.0502.60680.2.4.gem 13) cce/8.7.7 14) craype-network-gemini 15) craype/2.5.16 16) cray-libsci/18.12.1 17) pmi/5.0.11 18) rca/1.0.0-2.0502.60530.1.63.gem 19) atp/2.1.0 20) PrgEnv-cray/5.2.82 21) moab/9.1.2.h6-sles11 22) torque/6.1.2 23) craype-interlagos 24) cray-mpich/7.7.4 25) openssh/7.5p1 26) xalt/0.7.6.local 27) scripts 28) OpenSSL/1.0.2m 29) cURL/7.59.0 30) git/2.17.0 31) wget/1.19.4 32) user-paths 33) gnuplot/5.0.5 34) darshan/3.1.3-longusername 1 #!/bin/bash 2 #PBS -lnodes=16:ppn=16:xe,walltime=00:05:00 -Nosureduce 3 cd ~/osureduce-jenkins; module unload xalt darshan 4 aprun -n 256 ~arnoldg/osu-micro-benchmarks-4.2/mpi/collective/osu_reduce -M 4000000 -m 4000000 > osu_reduce.out 5 grep 524288 osu_reduce.out | tr -s '[ ]' | cut -d' ' -f2 > osureduce.datB 6 echo YVALUE= > osureduce.datA 7 paste osureduce.datA osureduce.datB > osureduce.dat 8 aprun -n 16 -N 1 hostname > stream-compute-node INFO: Job submitted to account: jnc MYJOBID=597246.jyc === RUNNING /u/staff/arnoldg/ior/wait_for.sh === Tue Nov 30 14:15:03 CST 2021: waiting for 597246.jyc to finish Tue Nov 30 14:20:03 CST 2021: waiting for 597246.jyc to finish qstat: Unknown Job Id Error 597246.nid00030 597246.jyc finished === JOB RAN ON === nid00063 nid00052 nid00061 nid00055 nid00053 nid00050 nid00049 nid00059 nid00058 nid00054 nid00056 nid00057 nid00062 nid00060 nid00051 nid00048 Application 1105438 resources: utime ~0s, stime ~16s, Rss ~24048, inblocks ~304, outblocks ~448 [SSH] completed [SSH] exit-status: 0 [workspace] $ /bin/sh -xe /tmp/jenkins5183017292239564947.sh + scp 'JYC_REMOTE:~/osureduce-jenkins/*' /var/lib/jenkins/jobs/osu_reduce/workspace Recording plot data Saving plot series data from: /var/lib/jenkins/jobs/osu_reduce/workspace/osureduce.dat Finished: SUCCESS