Started by user arnoldg
Building on master in workspace /var/lib/jenkins/workspace/rmg-spp
executing script:
PATH="/sw/tools/bin:/sw/tools/bin:$PATH"

set -v

# specify installation directory
export INSTDIR=~/rmg-spp
#rm -rf $INSTDIR
mkdir $INSTDIR
 
module swap PrgEnv-cray PrgEnv-gnu
module swap gcc gcc/4.9.3
module load boost
module load cmake/3.1.3
module load fftw
 
export CRAYPE_LINK_TYPE=dynamic
export CRAY_ADD_RPATH=yes
 
# install openbabel library
cd $INSTDIR
wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
tar zxvf openbabel-2.3.2.tar.gz
cd openbabel-2.3.2/
mkdir build
cd build/
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install ..
nice make -j8
make install
 
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib
 
export CC=cc
export CXX=CC
export FC=ftn
 
# install plplot library
cd $INSTDIR
git clone git://git.code.sf.net/p/plplot/plplot plplot.git
cd plplot.git/
mkdir build
cd build
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install ..
make
make install
 
# install CPU-version of RMG
cd $INSTDIR
wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
tar zxvf rmg-release_2.1.tar.gz
cd rmg-release_2.1
mkdir build-cpu; cd build-cpu
cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so ..
nice make -j12 rmg-cpu

rm -rf ~/scratch/rmg-spp
mkdir -p ~/scratch/rmg-spp
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/
cd ~/scratch/rmg-spp
cat run.pbs | grep -v aprun > myrun.pbs
echo "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/rmg-spp/openbabel-2.3.2/install/lib" >> myrun.pbs
echo "time aprun -n 400 -N 4 -d 8 -cc numa_node  ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs

cat -n myrun.pbs

MYJOBID=`qsub myrun.pbs`
echo MYJOBID=$MYJOBID
~arnoldg/ior/wait_for.sh $MYJOBID
tail *.log > ~/rmg-spp/rmg.logtail.txt

grep "real" z302water_cpu100.o*
MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` 
echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime
cat -n ~/rmg-spp/rmg.realtime

# specify installation directory
export INSTDIR=~/rmg-spp
#rm -rf $INSTDIR
mkdir $INSTDIR
mkdir: cannot create directory `/u/system/bwjenkins/rmg-spp': File exists
 
module swap PrgEnv-cray PrgEnv-gnu
${MODULESHOME}/bin/modulecmd bash $*
ATP_HOME=/opt/cray/atp/2.0.4 ;export ATP_HOME;ATP_IGNORE_SIGTERM=1 ;export ATP_IGNORE_SIGTERM;ATP_MRNET_COMM_PATH=/opt/cray/atp/2.0.4/libexec/atp_mrnet_commnode_wrapper ;export ATP_MRNET_COMM_PATH;ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/2.0.4/libApp/\ ;export ATP_POST_LINK_OPTS;CRAYOS_VERSION=5.2.82 ;export CRAYOS_VERSION;CRAYPE_DIR=/opt/cray/craype/2.5.8 ;export CRAYPE_DIR;CRAYPE_NETWORK_TARGET=gemini ;export CRAYPE_NETWORK_TARGET;CRAYPE_VERSION=2.5.8 ;export CRAYPE_VERSION;CRAY_ALPS_INCLUDE_OPTS=-I/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/include ;export CRAY_ALPS_INCLUDE_OPTS;CRAY_ALPS_POST_LINK_OPTS=-L/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64 ;export CRAY_ALPS_POST_LINK_OPTS;CRAY_CPU_TARGET=interlagos ;export CRAY_CPU_TARGET;CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/include\ -I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include\ ;export CRAY_DMAPP_INCLUDE_OPTS;CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64 ;export CRAY_DMAPP_POST_LINK_OPTS;CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/include ;export CRAY_GNI_HEADERS_INCLUDE_OPTS;CRAY_LD_LIBRARY_PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/16.11.1 ;export CRAY_LIBSCI_BASE_DIR;CRAY_LIBSCI_DIR=/opt/cray/libsci/16.11.1 ;export CRAY_LIBSCI_DIR;CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/16.11.1/GNU/4.9/x86_64 ;export CRAY_LIBSCI_PREFIX_DIR;CRAY_LIBSCI_VERSION=16.11.1 ;export CRAY_LIBSCI_VERSION;CRAY_MPICH2_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH2_DIR;CRAY_MPICH2_VER=7.5.0 ;export CRAY_MPICH2_VER;CRAY_MPICH_BASEDIR=/opt/cray/mpt/7.5.0/gni ;export CRAY_MPICH_BASEDIR;CRAY_MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export CRAY_MPICH_DIR;CRAY_MPICH_ROOTDIR=/opt/cray/mpt/7.5.0 ;export CRAY_MPICH_ROOTDIR;CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/include ;export CRAY_PMI_INCLUDE_OPTS;CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64 ;export CRAY_PMI_POST_LINK_OPTS;CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini ;export CRAY_PRE_COMPILE_OPTS;CRAY_PRGENVGNU=loaded ;export CRAY_PRGENVGNU;CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/include\ -I/opt/cray/krca/1.0.0-2.0502.63139.4.30.gem/include\ -I/opt/cray-hss-devel/7.2.0/include\ ;export CRAY_RCA_INCLUDE_OPTS;CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64\ -lrca\ ;export CRAY_RCA_POST_LINK_OPTS;CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/include ;export CRAY_UDREG_INCLUDE_OPTS;CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64 ;export CRAY_UDREG_POST_LINK_OPTS;CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/include ;export CRAY_UGNI_INCLUDE_OPTS;CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64 ;export CRAY_UGNI_POST_LINK_OPTS;CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/include ;export CRAY_XPMEM_INCLUDE_OPTS;CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64 ;export CRAY_XPMEM_POST_LINK_OPTS;DMAPP_ABORT_ON_ERROR=1 ;export DMAPP_ABORT_ON_ERROR;DVS_INCLUDE_OPTS=-I/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/include ;export DVS_INCLUDE_OPTS;DVS_VERSION=0.9.0 ;export DVS_VERSION;GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LIBSCI_BASE_DIR=/opt/cray/libsci/16.11.1 ;export LIBSCI_BASE_DIR;LIBSCI_VERSION=16.11.1 ;export LIBSCI_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.1.2-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/EasyBuild/software/wget/1.19.4/share/man:/sw/EasyBuild/software/cURL/7.59.0/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.1.2/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.1.2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;MODULEPATH=/sw/EasyBuild/modules/all:/sw/bw/modulefiles:/sw/xe/modulefiles:/usr/local/modulefiles:/opt/cray/gem/modulefiles:/opt/cray/craype/2.5.8/modulefiles:/opt/cray/modulefiles:/opt/modulefiles ;export MODULEPATH;MPICH_ABORT_ON_ERROR=1 ;export MPICH_ABORT_ON_ERROR;MPICH_DIR=/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9 ;export MPICH_DIR;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/EasyBuild/software/wget/1.19.4/bin:/sw/EasyBuild/software/git/2.17.0/bin:/sw/EasyBuild/software/cURL/7.59.0/bin:/sw/EasyBuild/software/OpenSSL/1.0.2m/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.1.2/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.1.2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_ACML_DEFAULT_DIR_CRAY=gfortran64 ;export PE_ACML_DEFAULT_DIR_CRAY;PE_ACML_DEFAULT_DIR_DEFAULT64=_int64 ;export PE_ACML_DEFAULT_DIR_DEFAULT64;PE_ACML_DEFAULT_DIR_GNU=gfortran64 ;export PE_ACML_DEFAULT_DIR_GNU;PE_ACML_DEFAULT_DIR_INTEL=ifort64 ;export PE_ACML_DEFAULT_DIR_INTEL;PE_ACML_DEFAULT_DIR_OPENMP=_mp ;export PE_ACML_DEFAULT_DIR_OPENMP;PE_ACML_DEFAULT_DIR_PGI=pgi64 ;export PE_ACML_DEFAULT_DIR_PGI;PE_ACML_DEFAULT_TARGET_interlagos=_fma4 ;export PE_ACML_DEFAULT_TARGET_interlagos;PE_ACML_DEFAULT_TARGET_x86_64= ;export PE_ACML_DEFAULT_TARGET_x86_64;PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/acml/5.3.1/@PE_ACML_DEFAULT_DIR@@PE_ACML_DEFAULT_TARGET@@PE_ACML_DEFAULT_DIR_OPENMP@@PE_ACML_DEFAULT_DIR_DEFAULT64@/lib/pkgconfig ;export PE_ACML_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/CRAY/8.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/CRAY/8.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0/CRAY/8.3/lib/pkgconfig:/opt/cray/ga/5.3.0.7/CRAY/8.4/lib/pkgconfig ;export PE_CRAY_DEFAULT_FIXED_PKGCONFIG_PATH;PE_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_CXX_PKGCONFIG_LIBS;PE_ENV=GNU ;export PE_ENV;PE_FFTW_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_DEFAULT_REQUIRED_PRODUCTS;PE_FFTW_DEFAULT_TARGET_abudhabi=abudhabi ;export PE_FFTW_DEFAULT_TARGET_abudhabi;PE_FFTW_DEFAULT_TARGET_broadwell=broadwell ;export PE_FFTW_DEFAULT_TARGET_broadwell;PE_FFTW_DEFAULT_TARGET_haswell=haswell ;export PE_FFTW_DEFAULT_TARGET_haswell;PE_FFTW_DEFAULT_TARGET_interlagos=interlagos ;export PE_FFTW_DEFAULT_TARGET_interlagos;PE_FFTW_DEFAULT_TARGET_ivybridge=ivybridge ;export PE_FFTW_DEFAULT_TARGET_ivybridge;PE_FFTW_DEFAULT_TARGET_mic_knl=mic_knl ;export PE_FFTW_DEFAULT_TARGET_mic_knl;PE_FFTW_DEFAULT_TARGET_sandybridge=sandybridge ;export PE_FFTW_DEFAULT_TARGET_sandybridge;PE_FFTW_DEFAULT_TARGET_share=share ;export PE_FFTW_DEFAULT_TARGET_share;PE_FFTW_DEFAULT_TARGET_x86_64=x86_64 ;export PE_FFTW_DEFAULT_TARGET_x86_64;PE_FFTW_DEFAULT_TARGET_x86_skylake=x86_skylake ;export PE_FFTW_DEFAULT_TARGET_x86_skylake;PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.6.5/@PE_FFTW_DEFAULT_TARGET@/lib/pkgconfig ;export PE_FFTW_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_FORTRAN_PKGCONFIG_LIBS;PE_GA_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_GA_DEFAULT_FIXED_PRGENV;PE_GA_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_GA_DEFAULT_GENCOMPILERS_GNU;PE_GA_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_GA_DEFAULT_GENCOMPS_GNU;PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/ga/5.3.0.7/@PRGENV@/@PE_GA_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_GA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_GA_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_GA_DEFAULT_VOLATILE_PRGENV;PE_HDF5_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_HDF5_DEFAULT_FIXED_PRGENV;PE_HDF5_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_DEFAULT_GENCOMPS_GNU;PE_HDF5_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5/1.10.0/@PRGENV@/@PE_HDF5_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_HDF5_DEFAULT_VOLATILE_PRGENV;PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_HDF5_PARALLEL_DEFAULT_FIXED_PRGENV;PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_HDF5_PARALLEL_DEFAULT_GENCOMPS_GNU;PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_HDF5_PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/hdf5-parallel/1.10.0/@PRGENV@/@PE_HDF5_PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_HDF5_PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/INTEL/15.0/lib/pkgconfig:/opt/cray/netcdf/4.4.1/INTEL/15.0/lib/pkgconfig:/opt/cray/mpt/7.5.0/gni/mpich-intel/16.0/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/INTEL/15.0/lib/pkgconfig:/opt/cray/hdf5/1.10.0/INTEL/15.0/lib/pkgconfig:/opt/cray/ga/5.3.0.7/INTEL/15.0/lib/pkgconfig ;export PE_INTEL_DEFAULT_FIXED_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64=4.9 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64=49 ;export PE_LIBSCI_ACC_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20=nv20 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia20;PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35=nv35 ;export PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_nvidia35;PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_ACC_DEFAULT_NV_SUFFIX_@accelerator@ ;export PE_LIBSCI_ACC_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_LIBSCI_ACC_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci_acc/16.03.1/@PRGENV@/@PE_LIBSCI_ACC_DEFAULT_GENCOMPS@/@PE_LIBSCI_ACC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_LIBSCI_ACC_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_DEFAULT_GENCOMPS_CRAY_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_DEFAULT_GENCOMPS_GNU_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_DEFAULT_GENCOMPS_INTEL_x86_64;PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_DEFAULT_GENCOMPS_PGI_x86_64;PE_LIBSCI_DEFAULT_OMP_REQUIRES= ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES;PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_DEFAULT_OMP_REQUIRES_openmp;PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES=PE_LIBSCI_DEFAULT_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_DEFAULT_PKGCONFIG_VARIABLES;PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_DEFAULT_REQUIRED_PRODUCTS;PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.11.1/@PRGENV@/@PE_LIBSCI_DEFAULT_GENCOMPS@/@PE_LIBSCI_DEFAULT_TARGET@/lib/pkgconfig ;export PE_LIBSCI_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_DEFAULT_VOLATILE_PRGENV;PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_LIBSCI_GENCOMPILERS_CRAY_mic_knl;PE_LIBSCI_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_LIBSCI_GENCOMPILERS_CRAY_x86_64;PE_LIBSCI_GENCOMPILERS_GNU_mic_knl=5.1 ;export PE_LIBSCI_GENCOMPILERS_GNU_mic_knl;PE_LIBSCI_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_LIBSCI_GENCOMPILERS_GNU_x86_64;PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_mic_knl;PE_LIBSCI_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_LIBSCI_GENCOMPILERS_INTEL_x86_64;PE_LIBSCI_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_LIBSCI_GENCOMPILERS_PGI_x86_64;PE_LIBSCI_GENCOMPS_CRAY_mic_knl=85 ;export PE_LIBSCI_GENCOMPS_CRAY_mic_knl;PE_LIBSCI_GENCOMPS_CRAY_x86_64=83 ;export PE_LIBSCI_GENCOMPS_CRAY_x86_64;PE_LIBSCI_GENCOMPS_GNU_mic_knl=51 ;export PE_LIBSCI_GENCOMPS_GNU_mic_knl;PE_LIBSCI_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_LIBSCI_GENCOMPS_GNU_x86_64;PE_LIBSCI_GENCOMPS_INTEL_mic_knl=150 ;export PE_LIBSCI_GENCOMPS_INTEL_mic_knl;PE_LIBSCI_GENCOMPS_INTEL_x86_64=150 ;export PE_LIBSCI_GENCOMPS_INTEL_x86_64;PE_LIBSCI_GENCOMPS_PGI_x86_64=153 ;export PE_LIBSCI_GENCOMPS_PGI_x86_64;PE_LIBSCI_MODULE_NAME=cray-libsci/16.11.1 ;export PE_LIBSCI_MODULE_NAME;PE_LIBSCI_OMP_REQUIRES= ;export PE_LIBSCI_OMP_REQUIRES;PE_LIBSCI_OMP_REQUIRES_openmp=_mp ;export PE_LIBSCI_OMP_REQUIRES_openmp;PE_LIBSCI_PKGCONFIG_LIBS=libsci_mpi:libsci ;export PE_LIBSCI_PKGCONFIG_LIBS;PE_LIBSCI_PKGCONFIG_VARIABLES=PE_LIBSCI_OMP_REQUIRES_@openmp@ ;export PE_LIBSCI_PKGCONFIG_VARIABLES;PE_LIBSCI_REQUIRED_PRODUCTS=PE_MPICH ;export PE_LIBSCI_REQUIRED_PRODUCTS;PE_LIBSCI_VOLATILE_PKGCONFIG_PATH=/opt/cray/libsci/16.11.1/@PRGENV@/@PE_LIBSCI_GENCOMPS@/@PE_LIBSCI_TARGET@/lib/pkgconfig ;export PE_LIBSCI_VOLATILE_PKGCONFIG_PATH;PE_LIBSCI_VOLATILE_PRGENV=CRAY\ GNU\ INTEL\ PGI ;export PE_LIBSCI_VOLATILE_PRGENV;PE_MPICH_CXX_PKGCONFIG_LIBS=mpichcxx ;export PE_MPICH_CXX_PKGCONFIG_LIBS;PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_CRAY_DEFAULT64;PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_MPICH_DEFAULT_DIR_PGI_DEFAULT64;PE_MPICH_DEFAULT_FIXED_PRGENV=INTEL ;export PE_MPICH_DEFAULT_FIXED_PRGENV;PE_MPICH_DEFAULT_GENCOMPILERS_CRAY=8.4 ;export PE_MPICH_DEFAULT_GENCOMPILERS_CRAY;PE_MPICH_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_MPICH_DEFAULT_GENCOMPILERS_GNU;PE_MPICH_DEFAULT_GENCOMPILERS_PGI=15.3 ;export PE_MPICH_DEFAULT_GENCOMPILERS_PGI;PE_MPICH_DEFAULT_GENCOMPS_CRAY=84 ;export PE_MPICH_DEFAULT_GENCOMPS_CRAY;PE_MPICH_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_MPICH_DEFAULT_GENCOMPS_GNU;PE_MPICH_DEFAULT_GENCOMPS_PGI=153 ;export PE_MPICH_DEFAULT_GENCOMPS_PGI;PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/mpich-@PRGENV@@PE_MPICH_DEFAULT_DIR_DEFAULT64@/@PE_MPICH_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_MPICH_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_MPICH_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU\ PGI ;export PE_MPICH_DEFAULT_VOLATILE_PRGENV;PE_MPICH_FORTRAN_PKGCONFIG_LIBS=mpichf90 ;export PE_MPICH_FORTRAN_PKGCONFIG_LIBS;PE_MPICH_MODULE_NAME=cray-mpich ;export PE_MPICH_MODULE_NAME;PE_MPICH_MULTITHREADED_LIBS_multithreaded=_mt ;export PE_MPICH_MULTITHREADED_LIBS_multithreaded;PE_MPICH_NV_LIBS= ;export PE_MPICH_NV_LIBS;PE_MPICH_NV_LIBS_nvidia20=-lcudart ;export PE_MPICH_NV_LIBS_nvidia20;PE_MPICH_NV_LIBS_nvidia35=-lcudart ;export PE_MPICH_NV_LIBS_nvidia35;PE_MPICH_PKGCONFIG_LIBS=mpich ;export PE_MPICH_PKGCONFIG_LIBS;PE_MPICH_PKGCONFIG_VARIABLES=PE_MPICH_NV_LIBS_@accelerator@:PE_MPICH_MULTITHREADED_LIBS_@multithreaded@ ;export PE_MPICH_PKGCONFIG_VARIABLES;PE_MPICH_TARGET_VAR_nvidia20=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia20;PE_MPICH_TARGET_VAR_nvidia35=-lcudart ;export PE_MPICH_TARGET_VAR_nvidia35;PE_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_DEFAULT_FIXED_PRGENV;PE_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_DEFAULT_GENCOMPS_GNU;PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5 ;export PE_NETCDF_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf/4.4.1/@PRGENV@/@PE_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_FIXED_PRGENV;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPILERS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS_GNU;PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS=PE_HDF5_PARALLEL:PE_MPICH ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_REQUIRED_PRODUCTS;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/netcdf-hdf5parallel/4.4.1/@PRGENV@/@PE_NETCDF_HDF5PARALLEL_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_NETCDF_HDF5PARALLEL_DEFAULT_VOLATILE_PRGENV;PE_PAPI_DEFAULT_ACCEL_LIBS= ;export PE_PAPI_DEFAULT_ACCEL_LIBS;PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_ACCEL_LIBS_nvidia35;PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES=PE_PAPI_ACCEL_LIBS_@accelerator@ ;export PE_PAPI_DEFAULT_PKGCONFIG_VARIABLES;PE_PAPI_DEFAULT_TARGET_VAR_nvidia35=,-lcupti,-lcudart,-lcuda ;export PE_PAPI_DEFAULT_TARGET_VAR_nvidia35;PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV=CRAY\ PGI\ INTEL ;export PE_PARALLEL_NETCDF_DEFAULT_FIXED_PRGENV;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU=5.1\ 4.9 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPILERS_GNU;PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU=51\ 49 ;export PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS_GNU;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/@PRGENV@/@PE_PARALLEL_NETCDF_DEFAULT_GENCOMPS@/lib/pkgconfig ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV=GNU ;export PE_PARALLEL_NETCDF_DEFAULT_VOLATILE_PRGENV;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_PETSC_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_PETSC_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_PETSC_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_haswell;PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_interlagos;PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_PETSC_DEFAULT_GENCOMPS_CRAY_x86_64;PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_haswell;PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_interlagos;PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_PETSC_DEFAULT_GENCOMPS_GNU_x86_64;PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_haswell;PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_interlagos;PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_PETSC_DEFAULT_GENCOMPS_INTEL_x86_64;PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_interlagos;PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_PETSC_DEFAULT_GENCOMPS_PGI_x86_64;PE_PETSC_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI:PE_HDF5_PARALLEL:PE_TPSL ;export PE_PETSC_DEFAULT_REQUIRED_PRODUCTS;PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/petsc/3.7.2.1/complex/@PRGENV@/@PE_PETSC_DEFAULT_GENCOMPS@/@PE_PETSC_DEFAULT_TARGET@/lib/pkgconfig ;export PE_PETSC_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_PETSC_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_PETSC_DEFAULT_VOLATILE_PRGENV;PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH=/opt/cray/parallel-netcdf/1.7.0/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf-hdf5parallel/4.4.1/PGI/15.3/lib/pkgconfig:/opt/cray/netcdf/4.4.1/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5-parallel/1.10.0/PGI/15.3/lib/pkgconfig:/opt/cray/hdf5/1.10.0/PGI/15.3/lib/pkgconfig:/opt/cray/ga/5.3.0.7/PGI/15.3/lib/pkgconfig ;export PE_PGI_DEFAULT_FIXED_PKGCONFIG_PATH;PE_PKGCONFIG_DEFAULT_PRODUCTS=PE_TRILINOS:PE_TPSL_64:PE_TPSL:PE_PETSC:PE_PARALLEL_NETCDF:PE_NETCDF_HDF5PARALLEL:PE_NETCDF:PE_MPICH:PE_LIBSCI_ACC:PE_LIBSCI:PE_HDF5_PARALLEL:PE_HDF5:PE_GA:PE_FFTW:PE_ACML ;export PE_PKGCONFIG_DEFAULT_PRODUCTS;PE_PKGCONFIG_LIBS=AtpSigHandler:cray-rca:libsci_mpi:libsci:darshan-runtime:mpich ;export PE_PKGCONFIG_LIBS;PE_PKGCONFIG_PRODUCTS=PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;PE_PKGCONFIG_PRODUCTS_DEFAULT=PE_PAPI ;export PE_PKGCONFIG_PRODUCTS_DEFAULT;PE_PKG_CONFIG_PATH=/opt/cray/cti/1.0.4/lib/pkgconfig ;export PE_PKG_CONFIG_PATH;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS ;export PE_PRODUCT_LIST;PE_SMA_DEFAULT_COMPFLAG= ;export PE_SMA_DEFAULT_COMPFLAG;PE_SMA_DEFAULT_COMPFLAG_GNU=-fcray-pointer ;export PE_SMA_DEFAULT_COMPFLAG_GNU;PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_CRAY_DEFAULT64;PE_SMA_DEFAULT_DIR_PGI_DEFAULT64=64 ;export PE_SMA_DEFAULT_DIR_PGI_DEFAULT64;PE_SMA_DEFAULT_PKGCONFIG_VARIABLES=PE_SMA_COMPFLAG_@prgenv@ ;export PE_SMA_DEFAULT_PKGCONFIG_VARIABLES;PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/mpt/7.5.0/gni/sma@PE_SMA_DEFAULT_DIR_DEFAULT64@/lib64/pkgconfig ;export PE_SMA_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_64_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_64_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_64_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_64_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_64_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_64_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.07.1/@PRGENV@64/@PE_TPSL_64_DEFAULT_GENCOMPS@/@PE_TPSL_64_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_64_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_64_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_64_DEFAULT_VOLATILE_PRGENV;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl=8.5 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64=8.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TPSL_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64=15.0 ;export PE_TPSL_DEFAULT_GENCOMPILERS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64=15.3 ;export PE_TPSL_DEFAULT_GENCOMPILERS_PGI_x86_64;PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_haswell;PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_interlagos;PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl=85 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_mic_knl;PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64=83 ;export PE_TPSL_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_haswell;PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_interlagos;PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TPSL_DEFAULT_GENCOMPS_GNU_x86_64;PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_haswell;PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_interlagos;PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_sandybridge;PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64=150 ;export PE_TPSL_DEFAULT_GENCOMPS_INTEL_x86_64;PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_interlagos;PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64=153 ;export PE_TPSL_DEFAULT_GENCOMPS_PGI_x86_64;PE_TPSL_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_LIBSCI ;export PE_TPSL_DEFAULT_REQUIRED_PRODUCTS;PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/tpsl/16.07.1/@PRGENV@/@PE_TPSL_DEFAULT_GENCOMPS@/@PE_TPSL_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TPSL_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TPSL_DEFAULT_VOLATILE_PRGENV=CRAY\ CRAY64\ GNU\ GNU64\ INTEL\ INTEL64\ PGI\ PGI64 ;export PE_TPSL_DEFAULT_VOLATILE_PRGENV;PE_TRILINOS_DEFAmodule swap gcc gcc/4.9.3
module load boost
module load cmake/3.1.3
module load fftw
 
export CRAYPE_LINK_TYPE=dynamic
export CRAY_ADD_RPATH=yes
 
# install openbabel library
cd $INSTDIR
wget http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
--2018-07-18 14:43:06--  http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
Resolving downloads.sourceforge.net... 216.105.38.13
Connecting to downloads.sourceforge.net|216.105.38.13|:80... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://astuteinternet.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz [following]
--2018-07-18 14:43:06--  https://astuteinternet.dl.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz
ULT_GENCOMPILERS_CRAY_x86_64=8.5 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64=5.1\ 4.9 ;export PE_TRILINOS_DEFAULT_GENCOMPILERS_GNU_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64=85 ;export PE_TRILINOS_DEFAULT_GENCOMPS_CRAY_x86_64;PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64=51\ 49 ;export PE_TRILINOS_DEFAULT_GENCOMPS_GNU_x86_64;PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS=PE_MPICH:PE_HDF5_PARALLEL:PE_NETCDF_HDF5PARALLEL:PE_LIBSCI:PE_TPSL ;export PE_TRILINOS_DEFAULT_REQUIRED_PRODUCTS;PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH=/opt/cray/trilinos/12.6.3.3/@PRGENV@/@PE_TRILINOS_DEFAULT_GENCOMPS@/@PE_TRILINOS_DEFAULT_TARGET@/lib/pkgconfig ;export PE_TRILINOS_DEFAULT_VOLATILE_PKGCONFIG_PATH;PE_TRILINOS_DEFAULT_VOLATILE_PRGENV=CRAY\ GNU ;export PE_TRILINOS_DEFAULT_VOLATILE_PRGENV;PKGCONFIG_ENABLED=1 ;export PKGCONFIG_ENABLED;PKG_CONFIG_PATH=/sw/xe/darshan/3.1.3/darshan-3.1.3/lib/pkgconfig:/sw/EasyBuild/software/cURL/7.59.0/lib/pkgconfig:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib/pkgconfig:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/pkgconfig:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64/pkgconfig:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64/pkgconfig:/opt/cray/gni-headers/4.0-1.0502.10859.7.8.gem/lib64/pkgconfig:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64/pkgconfig:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64/pkgconfig:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64/pkgconfig:/opt/cray/craype/2.5.8/pkg-config:/opt/cray/iobuf/2.0.7/lib/pkgconfig:/opt/cray/atp/2.0.4/lib/pkgconfig ;export PKG_CONFIG_PATH;PKG_CONFIG_PATH_DEFAULT=/opt/cray/papi/5.5.0.1/lib64/pkgconfig ;export PKG_CONFIG_PATH_DEFAULT;SHMEM_ABORT_ON_ERROR=1 ;export SHMEM_ABORT_ON_ERROR;XTOS_VERSION=5.2.82 ;export XTOS_VERSION;XTPE_NETWORK_TARGET=gemini ;export XTPE_NETWORK_TARGET;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.1.2-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;unset ASSEMBLER_X86_64;unset CC_X86_64;unset CRAYLIBS_X86_64;unset CRAYLMD_LICENSE_FILE;unset CRAY_BINUTILS_BIN;unset CRAY_BINUTILS_ROOT;unset CRAY_BINUTILS_VERSION;unset CRAY_CC_VERSION;unset CRAY_CXX_IPA_LIBS;unset CRAY_FTN_VERSION;unset CRAY_PE_TARGET;unset CRAY_PRGENVCRAY;unset FORTRAN_SYSTEM_MODULE_NAMES;unset FTN_X86_64;unset GCC_X86_64;unset INCLUDE_PATH_X86_64;unset LINKER_X86_64;unset NLSPATH;unset PE_LEVEL;
${MODULESHOME}/bin/modulecmd bash $*
GCC_PATH=/opt/gcc/4.9.3 ;export GCC_PATH;GCC_VERSION=4.9.3 ;export GCC_VERSION;GNU_VERSION=4.9.3 ;export GNU_VERSION;INFOPATH=/opt/gcc/4.9.3/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ;export INFOPATH;LD_LIBRARY_PATH=/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.1.2-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82 ;export LOADEDMODULES;MANPATH=/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/EasyBuild/software/wget/1.19.4/share/man:/sw/EasyBuild/software/cURL/7.59.0/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.1.2/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.1.2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/EasyBuild/software/wget/1.19.4/bin:/sw/EasyBuild/software/git/2.17.0/bin:/sw/EasyBuild/software/cURL/7.59.0/bin:/sw/EasyBuild/software/OpenSSL/1.0.2m/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.1.2/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.1.2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.1.2-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
BOOST_ROOT=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2 ;export BOOST_ROOT;CRAY_BOOST_DIR=/sw/xe/boost/1.53.0 ;export CRAY_BOOST_DIR;CRAY_BOOST_INCLUDE_OPTS=-I/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/include ;export CRAY_BOOST_INCLUDE_OPTS;CRAY_BOOST_POST_LINK_OPTS=-L/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib ;export CRAY_BOOST_POST_LINK_OPTS;CRAY_BOOST_VERSION=1.53.0 ;export CRAY_BOOST_VERSION;LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64 ;export LD_LIBRARY_PATH;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.1.2-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0 ;export LOADEDMODULES;PE_PRODUCT_LIST=CRAY_RCA:CRAY_ALPS:DVS:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:GNU:GCC:CRAYPE:CRAYPE_INTERLAGOS:CRAY_BOOST ;export PE_PRODUCT_LIST;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.1.2-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.1.2-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3 ;export LOADEDMODULES;PATH=/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/EasyBuild/software/wget/1.19.4/bin:/sw/EasyBuild/software/git/2.17.0/bin:/sw/EasyBuild/software/cURL/7.59.0/bin:/sw/EasyBuild/software/OpenSSL/1.0.2m/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.1.2/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.1.2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.1.2-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3 ;export _LMFILES_;
${MODULESHOME}/bin/modulecmd bash $*
CRAY_FFTW_VERSION=3.3.4.10 ;export CRAY_FFTW_VERSION;CRAY_LD_LIBRARY_PATH=/opt/cray/fftw/3.3.4.10/interlagos/lib:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/lib64:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.11080.8.74.gem/lib64:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/lib64:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/lib64:/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib:/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib ;export CRAY_LD_LIBRARY_PATH;FFTW_DIR=/opt/cray/fftw/3.3.4.10/interlagos/lib ;export FFTW_DIR;FFTW_INC=/opt/cray/fftw/3.3.4.10/interlagos/include ;export FFTW_INC;FFTW_VERSION=3.3.4.10 ;export FFTW_VERSION;LOADEDMODULES=modules/3.2.10.4:eswrap/1.3.3-1.020200.1280.0:gcc/4.9.3:craype-interlagos:craype-network-gemini:craype/2.5.8:cray-mpich/7.5.0:torque/6.0.4:moab/9.1.2-sles11:java/jdk1.8.0_51:globus/5.2.5:gsissh/6.2p2:xalt/0.7.6.local:scripts:OpenSSL/1.0.2m:cURL/7.59.0:git/2.17.0:wget/1.19.4:user-paths:gnuplot/5.0.5:darshan/3.1.3:cray-libsci/16.11.1:udreg/2.3.2-1.0502.10518.2.17.gem:ugni/6.0-1.0502.10863.8.28.gem:pmi/5.0.10-1.0000.11050.179.3.gem:dmapp/7.0.1-1.0502.11080.8.74.gem:gni-headers/4.0-1.0502.10859.7.8.gem:xpmem/0.1-2.0502.64982.5.3.gem:dvs/2.5_0.9.0-1.0502.2188.1.113.gem:alps/5.2.4-2.0502.9774.31.12.gem:rca/1.0.0-2.0502.60530.1.63.gem:atp/2.0.4:PrgEnv-gnu/5.2.82:boost/1.53.0:cmake/3.1.3:fftw/3.3.4.10 ;export LOADEDMODULES;MANPATH=/opt/cray/fftw/3.3.4.10/share/man:/opt/cray/atp/2.0.4/man:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/man:/opt/cray/libsci/16.11.1/man:/opt/cray/man/csmlversion:/opt/gcc/4.9.3/snos/share/man:/sw/EasyBuild/software/gnuplot/5.0.5/share/man:/sw/EasyBuild/software/wget/1.19.4/share/man:/sw/EasyBuild/software/cURL/7.59.0/share/man:/sw/user/man:/opt/java/jdk1.8.0_51/man:/usr/local/globus-5.2.5/man:/opt/moab/9.1.2/share/man/:/opt/torque/6.0.4/share/man:/opt/cray/mpt/7.5.0/gni/man/mpich:/opt/cray/craype/2.5.8/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/man:/opt/modules/3.2.10.4/share/man:/opt/moab/9.1.2/share/man::ignore:/usr/local/man:/usr/share/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/3.2.6/man:/opt/cray/man:/u/system/bwjenkins/man ;export MANPATH;PATH=/opt/cray/fftw/3.3.4.10/interlagos/bin:/sw/xe/cmake/3.1.3/sles11.3_gnu4.3.4/bin:/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/bin:/opt/cray/alps/5.2.4-2.0502.9774.31.12.gem/sbin:/opt/cray/dvs/2.5_0.9.0-1.0502.2188.1.113.gem/bin:/opt/cray/xpmem/0.1-2.0502.64982.5.3.gem/bin:/opt/cray/pmi/5.0.10-1.0000.11050.179.3.gem/bin:/opt/cray/ugni/6.0-1.0502.10863.8.28.gem/bin:/opt/cray/udreg/2.3.2-1.0502.10518.2.17.gem/bin:/opt/gcc/4.9.3/bin:/sw/tools/bin:/sw/tools/bin:/sw/xe/darshan/3.1.3/darshan-3.1.3/bin:/sw/EasyBuild/software/gnuplot/5.0.5/bin:/sw/EasyBuild/software/wget/1.19.4/bin:/sw/EasyBuild/software/git/2.17.0/bin:/sw/EasyBuild/software/cURL/7.59.0/bin:/sw/EasyBuild/software/OpenSSL/1.0.2m/bin:/sw/admin/scripts:/sw/user/scripts:/opt/xalt/0.7.6/sles11.3/libexec:/opt/xalt/0.7.6/sles11.3/bin:/usr/local/gsi-openssh-6.2p2-2/bin:/opt/java/jdk1.8.0_51/bin:/usr/local/globus-5.2.5/bin:/usr/local/globus-5.2.5/sbin:/opt/moab/9.1.2/sbin:/opt/torque/6.0.4/sbin:/opt/torque/6.0.4/bin:/opt/cray/mpt/7.5.0/gni/bin:/opt/cray/craype/2.5.8/bin:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1280.0/bin:/opt/modules/3.2.10.4/bin:/opt/moab/9.1.2/bin:/u/system/bwjenkins/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ;export PATH;PE_FFTW_OMP_REQUIRES=\ ;export PE_FFTW_OMP_REQUIRES;PE_FFTW_OMP_REQUIRES_openmp=_mp ;export PE_FFTW_OMP_REQUIRES_openmp;PE_FFTW_PKGCONFIG_LIBS=fftw3f_mpi:libfftw3f_threads:fftw3f:fftw3_mpi:libfftw3_threads:fftw3 ;export PE_FFTW_PKGCONFIG_LIBS;PE_FFTW_PKGCONFIG_VARIABLES=PE_FFTW_OMP_REQUIRES_@openmp@ ;export PE_FFTW_PKGCONFIG_VARIABLES;PE_FFTW_REQUIRED_PRODUCTS=PE_MPICH ;export PE_FFTW_REQUIRED_PRODUCTS;PE_FFTW_TARGET_abudhabi=abudhabi ;export PE_FFTW_TARGET_abudhabi;PE_FFTW_TARGET_broadwell=broadwell ;export PE_FFTW_TARGET_broadwell;PE_FFTW_TARGET_haswell=haswell ;export PE_FFTW_TARGET_haswell;PE_FFTW_TARGET_interlagos=interlagos ;export PE_FFTW_TARGET_interlagos;PE_FFTW_TARGET_ivybridge=ivybridge ;export PE_FFTW_TARGET_ivybridge;PE_FFTW_TARGET_mic_knl=mic_knl ;export PE_FFTW_TARGET_mic_knl;PE_FFTW_TARGET_sandybridge=sandybridge ;export PE_FFTW_TARGET_sandybridge;PE_FFTW_TARGET_share=share ;export PE_FFTW_TARGET_share;PE_FFTW_TARGET_x86_64=x86_64 ;export PE_FFTW_TARGET_x86_64;PE_FFTW_VOLATILE_PKGCONFIG_PATH=/opt/cray/fftw/3.3.4.10/@PE_FFTW_TARGET@/lib/pkgconfig ;export PE_FFTW_VOLATILE_PKGCONFIG_PATH;PE_PKGCONFIG_PRODUCTS=PE_FFTW:PE_LIBSCI:PE_MPICH ;export PE_PKGCONFIG_PRODUCTS;_LMFILES_=/opt/modulefiles/modules/3.2.10.4:/opt/modulefiles/eswrap/1.3.3-1.020200.1280.0:/opt/modulefiles/gcc/4.9.3:/opt/cray/craype/2.5.8/modulefiles/craype-interlagos:/opt/cray/craype/2.5.8/modulefiles/craype-network-gemini:/opt/cray/modulefiles/craype/2.5.8:/opt/cray/modulefiles/cray-mpich/7.5.0:/opt/modulefiles/torque/6.0.4:/opt/modulefiles/moab/9.1.2-sles11:/opt/modulefiles/java/jdk1.8.0_51:/usr/local/modulefiles/globus/5.2.5:/usr/local/modulefiles/gsissh/6.2p2:/opt/modulefiles/xalt/0.7.6.local:/sw/xe/modulefiles/scripts:/sw/EasyBuild/modules/all/OpenSSL/1.0.2m:/sw/EasyBuild/modules/all/cURL/7.59.0:/sw/EasyBuild/modules/all/git/2.17.0:/sw/EasyBuild/modules/all/wget/1.19.4:/sw/xe/modulefiles/user-paths:/sw/EasyBuild/modules/all/gnuplot/5.0.5:/sw/xe/modulefiles/darshan/3.1.3:/opt/cray/modulefiles/cray-libsci/16.11.1:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0502.10518.2.17.gem:/opt/cray/gem/modulefiles/ugni/6.0-1.0502.10863.8.28.gem:/opt/cray/gem/modulefiles/pmi/5.0.10-1.0000.11050.179.3.gem:/opt/cray/gem/modulefiles/dmapp/7.0.1-1.0502.11080.8.74.gem:/opt/cray/gem/modulefiles/gni-headers/4.0-1.0502.10859.7.8.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0502.64982.5.3.gem:/opt/cray/gem/modulefiles/dvs/2.5_0.9.0-1.0502.2188.1.113.gem:/opt/cray/gem/modulefiles/alps/5.2.4-2.0502.9774.31.12.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0502.60530.1.63.gem:/opt/cray/modulefiles/atp/2.0.4:/opt/cray/modulefiles/PrgEnv-gnu/5.2.82:/sw/xe/modulefiles/boost/1.53.0:/sw/xe/modulefiles/cmake/3.1.3:/opt/cray/modulefiles/fftw/3.3.4.10 ;export _LMFILES_;
Resolving astuteinternet.dl.sourceforge.net... 162.213.157.36
Connecting to astuteinternet.dl.sourceforge.net|162.213.157.36|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 20509105 (20M) [application/x-gzip]
Saving to: ‘openbabel-2.3.2.tar.gz.9’

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2018-07-18 14:43:08 (14.2 MB/s) - ‘openbabel-2.3.2.tar.gz.9’ saved [20509105/20509105]

tar zxvf openbabel-2.3.2.tar.gz
openbabel-2.3.2/
openbabel-2.3.2/AUTHORS
openbabel-2.3.2/ChangeLog
openbabel-2.3.2/ChangeLog.1.x
openbabel-2.3.2/cmake/
openbabel-2.3.2/CMakeLists.txt
openbabel-2.3.2/COPYING
openbabel-2.3.2/CTestConfig.cmake
openbabel-2.3.2/data/
openbabel-2.3.2/doc/
openbabel-2.3.2/Doxyfile
openbabel-2.3.2/include/
openbabel-2.3.2/INSTALL
openbabel-2.3.2/NEWS
openbabel-2.3.2/openbabel-2.0.pc.cmake
openbabel-2.3.2/OpenBabel2Config.cmake.in
openbabel-2.3.2/OpenBabel2ConfigVersion.cmake.in
openbabel-2.3.2/README
openbabel-2.3.2/scripts/
openbabel-2.3.2/src/
openbabel-2.3.2/test/
openbabel-2.3.2/THANKS
openbabel-2.3.2/tools/
openbabel-2.3.2/windows-vc2008/
openbabel-2.3.2/windows-vc2008/default_build.bat
openbabel-2.3.2/windows-vc2008/Distribution/
openbabel-2.3.2/windows-vc2008/include/
openbabel-2.3.2/windows-vc2008/libs/
openbabel-2.3.2/windows-vc2008/minimal_build.bat
openbabel-2.3.2/windows-vc2008/obdepict.bat
openbabel-2.3.2/windows-vc2008/sdf.bat
openbabel-2.3.2/windows-vc2008/x64_default_build.bat
openbabel-2.3.2/windows-vc2008/libs/i386/
openbabel-2.3.2/windows-vc2008/libs/x64/
openbabel-2.3.2/windows-vc2008/libs/x64/env.bat
openbabel-2.3.2/windows-vc2008/libs/x64/libiconv.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libinchi.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libinchi.lib
openbabel-2.3.2/windows-vc2008/libs/x64/libxml2.dll
openbabel-2.3.2/windows-vc2008/libs/x64/libxml2.lib
openbabel-2.3.2/windows-vc2008/libs/x64/readme.txt
openbabel-2.3.2/windows-vc2008/libs/x64/zlib1.dll
openbabel-2.3.2/windows-vc2008/libs/x64/zlib1.lib
openbabel-2.3.2/windows-vc2008/libs/i386/cairo.lib
openbabel-2.3.2/windows-vc2008/libs/i386/env.bat
openbabel-2.3.2/windows-vc2008/libs/i386/freetype6.dll
openbabel-2.3.2/windows-vc2008/libs/i386/iconv.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libcairo-2.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libexpat-1.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libfontconfig-1.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libinchi.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libinchi.lib
openbabel-2.3.2/windows-vc2008/libs/i386/libpng14-14.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libxml2.dll
openbabel-2.3.2/windows-vc2008/libs/i386/libxml2.lib
openbabel-2.3.2/windows-vc2008/libs/i386/readme.txt
openbabel-2.3.2/windows-vc2008/libs/i386/xdr-0.dll
openbabel-2.3.2/windows-vc2008/libs/i386/xdr.lib
openbabel-2.3.2/windows-vc2008/libs/i386/zlib1.dll
openbabel-2.3.2/windows-vc2008/libs/i386/zlib1.lib
openbabel-2.3.2/windows-vc2008/include/cairo/
openbabel-2.3.2/windows-vc2008/include/inttypes.h
openbabel-2.3.2/windows-vc2008/include/rpc/
openbabel-2.3.2/windows-vc2008/include/stdint.h
openbabel-2.3.2/windows-vc2008/include/rpc/types.h
openbabel-2.3.2/windows-vc2008/include/rpc/xdr.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-deprecated.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-features.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-ft.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-gobject.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-pdf.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-ps.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-script-interpreter.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-svg.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-version.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo-win32.h
openbabel-2.3.2/windows-vc2008/include/cairo/cairo.h
openbabel-2.3.2/windows-vc2008/Distribution/ExampleFiles/
openbabel-2.3.2/windows-vc2008/Distribution/logo_big.bmp
openbabel-2.3.2/windows-vc2008/Distribution/logo_small.bmp
openbabel-2.3.2/windows-vc2008/Distribution/NSISScriptToCreateInstaller.nsi
openbabel-2.3.2/windows-vc2008/Distribution/obdotnet.snk
openbabel-2.3.2/windows-vc2008/Distribution/OBDotNetAssemblyInfo.cs
openbabel-2.3.2/windows-vc2008/Distribution/Python/
openbabel-2.3.2/windows-vc2008/Distribution/ToolsPrograms.txt
openbabel-2.3.2/windows-vc2008/Distribution/Python/a_obpython.bat
openbabel-2.3.2/windows-vc2008/Distribution/Python/b_obpython.bat
openbabel-2.3.2/windows-vc2008/Distribution/Python/logo.bmp
openbabel-2.3.2/windows-vc2008/Distribution/Python/setup.py
openbabel-2.3.2/windows-vc2008/Distribution/ExampleFiles/150mols.smi
openbabel-2.3.2/windows-vc2008/Distribution/ExampleFiles/FourSmallMols.cml
openbabel-2.3.2/windows-vc2008/Distribution/ExampleFiles/oxamide.cml
openbabel-2.3.2/windows-vc2008/Distribution/ExampleFiles/serotonin.mol
openbabel-2.3.2/tools/babel.cpp
openbabel-2.3.2/tools/CMakeLists.txt
openbabel-2.3.2/tools/getopt.c
openbabel-2.3.2/tools/getopt.h
openbabel-2.3.2/tools/obabel.cpp
openbabel-2.3.2/tools/obchiral.cpp
openbabel-2.3.2/tools/obconformer.cpp
openbabel-2.3.2/tools/obdoc.cpp
openbabel-2.3.2/tools/obenergy.cpp
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openbabel-2.3.2/src/stereo/squareplanar.cpp
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openbabel-2.3.2/src/stereo/tetrahedral.cpp
openbabel-2.3.2/src/stereo/tetranonplanar.cpp
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openbabel-2.3.2/src/ops/addinindex.cpp
openbabel-2.3.2/src/ops/addpolarh.cpp
openbabel-2.3.2/src/ops/canonical.cpp
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openbabel-2.3.2/src/ops/deferred.h
openbabel-2.3.2/src/ops/fillUC.cpp
openbabel-2.3.2/src/ops/forcefield.cpp
openbabel-2.3.2/src/ops/gen2D.cpp
openbabel-2.3.2/src/ops/gen3d.cpp
openbabel-2.3.2/src/ops/largest.cpp
openbabel-2.3.2/src/ops/loader.cpp
openbabel-2.3.2/src/ops/op2d.cpp
openbabel-2.3.2/src/ops/opalign.cpp
openbabel-2.3.2/src/ops/ophighlight.cpp
openbabel-2.3.2/src/ops/opisomorph.cpp
openbabel-2.3.2/src/ops/opisomorph.h
openbabel-2.3.2/src/ops/optransform.cpp
openbabel-2.3.2/src/ops/partialcharges.cpp
openbabel-2.3.2/src/ops/readconformers.cpp
openbabel-2.3.2/src/ops/sort.cpp
openbabel-2.3.2/src/ops/unique.cpp
openbabel-2.3.2/src/ops/xout.cpp
openbabel-2.3.2/src/math/align.cpp
openbabel-2.3.2/src/math/matrix3x3.cpp
openbabel-2.3.2/src/math/spacegroup.cpp
openbabel-2.3.2/src/math/transform3d.cpp
openbabel-2.3.2/src/math/vector3.cpp
openbabel-2.3.2/src/GUI/babel.xpm
openbabel-2.3.2/src/GUI/babel2.ico
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openbabel-2.3.2/src/GUI/OBGUI.cpp
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openbabel-2.3.2/src/GUI/OBGUI.rc
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openbabel-2.3.2/src/formats/chem3dformat.cpp
openbabel-2.3.2/src/formats/chemdrawcdx.cpp
openbabel-2.3.2/src/formats/chemdrawct.cpp
openbabel-2.3.2/src/formats/chemkinformat.cpp
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openbabel-2.3.2/src/formats/crkformat.cpp
openbabel-2.3.2/src/formats/crystal09format.cpp
openbabel-2.3.2/src/formats/CSRformat.cpp
openbabel-2.3.2/src/formats/cssrformat.cpp
openbabel-2.3.2/src/formats/dlpolyformat.cpp
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openbabel-2.3.2/src/formats/fastaformat.cpp
openbabel-2.3.2/src/formats/fastsearchformat.cpp
openbabel-2.3.2/src/formats/fchkformat.cpp
openbabel-2.3.2/src/formats/featformat.cpp
openbabel-2.3.2/src/formats/fhformat.cpp
openbabel-2.3.2/src/formats/fhiaimsformat.cpp
openbabel-2.3.2/src/formats/fingerprintformat.cpp
openbabel-2.3.2/src/formats/formats.cmake
openbabel-2.3.2/src/formats/fpsformat.cpp
openbabel-2.3.2/src/formats/freefracformat.cpp
openbabel-2.3.2/src/formats/gamessformat.cpp
openbabel-2.3.2/src/formats/gamessukformat.cpp
openbabel-2.3.2/src/formats/gausscubeformat.cpp
openbabel-2.3.2/src/formats/gaussformat.cpp
openbabel-2.3.2/src/formats/gausszmatformat.cpp
openbabel-2.3.2/src/formats/genbankformat.cpp
openbabel-2.3.2/src/formats/getinchi.cpp
openbabel-2.3.2/src/formats/ghemicalformat.cpp
openbabel-2.3.2/src/formats/groformat.cpp
openbabel-2.3.2/src/formats/gromos96format.cpp
openbabel-2.3.2/src/formats/gulpformat.cpp
openbabel-2.3.2/src/formats/hinformat.cpp
openbabel-2.3.2/src/formats/inchiformat.cpp
openbabel-2.3.2/src/formats/jaguarformat.cpp
openbabel-2.3.2/src/formats/libinchi/
openbabel-2.3.2/src/formats/lmpdatformat.cpp
openbabel-2.3.2/src/formats/MCDLformat.cpp
openbabel-2.3.2/src/formats/mdlformat.cpp
openbabel-2.3.2/src/formats/mmcifformat.cpp
openbabel-2.3.2/src/formats/mmodformat.cpp
openbabel-2.3.2/src/formats/MNAformat.cpp
openbabel-2.3.2/src/formats/mol2format.cpp
openbabel-2.3.2/src/formats/moldenformat.cpp
openbabel-2.3.2/src/formats/molproformat.cpp
openbabel-2.3.2/src/formats/molreport.cpp
openbabel-2.3.2/src/formats/mopacformat.cpp
openbabel-2.3.2/src/formats/mpdformat.cpp
openbabel-2.3.2/src/formats/mpqcformat.cpp
openbabel-2.3.2/src/formats/msiformat.cpp
openbabel-2.3.2/src/formats/msmsformat.cpp
openbabel-2.3.2/src/formats/nulformat.cpp
openbabel-2.3.2/src/formats/nwchemformat.cpp
openbabel-2.3.2/src/formats/opendxformat.cpp
openbabel-2.3.2/src/formats/outformat.cpp
openbabel-2.3.2/src/formats/pcmodelformat.cpp
openbabel-2.3.2/src/formats/pdbformat.cpp
openbabel-2.3.2/src/formats/pdbqtformat.cpp
openbabel-2.3.2/src/formats/png2format.cpp
openbabel-2.3.2/src/formats/pngformat.cpp
openbabel-2.3.2/src/formats/posformat.cpp
openbabel-2.3.2/src/formats/povrayformat.cpp
openbabel-2.3.2/src/formats/pqrformat.cpp
openbabel-2.3.2/src/formats/PQSformat.cpp
openbabel-2.3.2/src/formats/pwscfformat.cpp
openbabel-2.3.2/src/formats/qchemformat.cpp
openbabel-2.3.2/src/formats/reportformat.cpp
openbabel-2.3.2/src/formats/rsmiformat.cpp
openbabel-2.3.2/src/formats/rxnformat.cpp
openbabel-2.3.2/src/formats/shelxformat.cpp
openbabel-2.3.2/src/formats/smilesformat.cpp
openbabel-2.3.2/src/formats/svgformat.cpp
openbabel-2.3.2/src/formats/textformat.cpp
openbabel-2.3.2/src/formats/thermoformat.cpp
openbabel-2.3.2/src/formats/tinkerformat.cpp
openbabel-2.3.2/src/formats/titleformat.cpp
openbabel-2.3.2/src/formats/turbomoleformat.cpp
openbabel-2.3.2/src/formats/unichemformat.cpp
openbabel-2.3.2/src/formats/vaspformat.cpp
openbabel-2.3.2/src/formats/viewmolformat.cpp
openbabel-2.3.2/src/formats/xedformat.cpp
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openbabel-2.3.2/src/formats/xsfformat.cpp
openbabel-2.3.2/src/formats/xtcformat.cpp
openbabel-2.3.2/src/formats/xyzformat.cpp
openbabel-2.3.2/src/formats/yasaraformat.cpp
openbabel-2.3.2/src/formats/zindoformat.cpp
openbabel-2.3.2/src/formats/xml/cdxmlformat.cpp
openbabel-2.3.2/src/formats/xml/cmlformat.cpp
openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp
openbabel-2.3.2/src/formats/xml/iconv.h
openbabel-2.3.2/src/formats/xml/pubchem.cpp
openbabel-2.3.2/src/formats/xml/xml.cpp
openbabel-2.3.2/src/formats/xml/xmlformat.cpp
openbabel-2.3.2/src/formats/libinchi/CMakeLists.txt
openbabel-2.3.2/src/formats/libinchi/ichi_bns.c
openbabel-2.3.2/src/formats/libinchi/ichi_io.c
openbabel-2.3.2/src/formats/libinchi/ichican2.c
openbabel-2.3.2/src/formats/libinchi/ichicano.c
openbabel-2.3.2/src/formats/libinchi/ichicans.c
openbabel-2.3.2/src/formats/libinchi/ichiisot.c
openbabel-2.3.2/src/formats/libinchi/ichilnct.c
openbabel-2.3.2/src/formats/libinchi/ichimak2.c
openbabel-2.3.2/src/formats/libinchi/ichimake.c
openbabel-2.3.2/src/formats/libinchi/ichimap1.c
openbabel-2.3.2/src/formats/libinchi/ichimap2.c
openbabel-2.3.2/src/formats/libinchi/ichimap4.c
openbabel-2.3.2/src/formats/libinchi/ichinorm.c
openbabel-2.3.2/src/formats/libinchi/ichiparm.c
openbabel-2.3.2/src/formats/libinchi/ichiprt1.c
openbabel-2.3.2/src/formats/libinchi/ichiprt2.c
openbabel-2.3.2/src/formats/libinchi/ichiprt3.c
openbabel-2.3.2/src/formats/libinchi/ichiqueu.c
openbabel-2.3.2/src/formats/libinchi/ichiread.c
openbabel-2.3.2/src/formats/libinchi/ichiring.c
openbabel-2.3.2/src/formats/libinchi/ichirvr1.c
openbabel-2.3.2/src/formats/libinchi/ichirvr2.c
openbabel-2.3.2/src/formats/libinchi/ichirvr3.c
openbabel-2.3.2/src/formats/libinchi/ichirvr4.c
openbabel-2.3.2/src/formats/libinchi/ichirvr5.c
openbabel-2.3.2/src/formats/libinchi/ichirvr6.c
openbabel-2.3.2/src/formats/libinchi/ichirvr7.c
openbabel-2.3.2/src/formats/libinchi/ichisort.c
openbabel-2.3.2/src/formats/libinchi/ichister.c
openbabel-2.3.2/src/formats/libinchi/ichitaut.c
openbabel-2.3.2/src/formats/libinchi/ikey_base26.c
openbabel-2.3.2/src/formats/libinchi/ikey_dll.c
openbabel-2.3.2/src/formats/libinchi/inchi_dll.c
openbabel-2.3.2/src/formats/libinchi/inchi_dll_a.c
openbabel-2.3.2/src/formats/libinchi/inchi_dll_a2.c
openbabel-2.3.2/src/formats/libinchi/inchi_dll_main.c
openbabel-2.3.2/src/formats/libinchi/runichi.c
openbabel-2.3.2/src/formats/libinchi/sha2.c
openbabel-2.3.2/src/formats/libinchi/strutil.c
openbabel-2.3.2/src/formats/libinchi/util.c
openbabel-2.3.2/src/forcefields/forcefieldgaff.cpp
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openbabel-2.3.2/src/forcefields/forcefieldghemical.cpp
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openbabel-2.3.2/src/forcefields/forcefieldmm2.cpp
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openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp
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openbabel-2.3.2/src/forcefields/forcefielduff.cpp
openbabel-2.3.2/src/forcefields/forcefielduff.h
openbabel-2.3.2/src/fingerprints/finger2.cpp
openbabel-2.3.2/src/fingerprints/finger3.cpp
openbabel-2.3.2/src/descriptors/cansmidescriptor.cpp
openbabel-2.3.2/src/descriptors/cmpdfilter.cpp
openbabel-2.3.2/src/descriptors/filters.cpp
openbabel-2.3.2/src/descriptors/groupcontrib.cpp
openbabel-2.3.2/src/descriptors/inchidescriptor.cpp
openbabel-2.3.2/src/descriptors/smartsdescriptors.cpp
openbabel-2.3.2/src/depict/asciipainter.cpp
openbabel-2.3.2/src/depict/cairopainter.cpp
openbabel-2.3.2/src/depict/depict.cpp
openbabel-2.3.2/src/depict/svgpainter.cpp
openbabel-2.3.2/src/charges/eem.cpp
openbabel-2.3.2/src/charges/gasteiger.cpp
openbabel-2.3.2/src/charges/mmff94.cpp
openbabel-2.3.2/src/charges/none.cpp
openbabel-2.3.2/src/charges/qeq.cpp
openbabel-2.3.2/src/charges/qeq.h
openbabel-2.3.2/src/charges/qtpie.cpp
openbabel-2.3.2/src/charges/qtpie.h
openbabel-2.3.2/scripts/CMakeLists.txt
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openbabel-2.3.2/scripts/python/examples/testpybel.pyc
openbabel-2.3.2/scripts/python/examples/wgtRotorSrch.py
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openbabel-2.3.2/scripts/perl/examples/
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openbabel-2.3.2/doc/API/html/search/classes_72.html
openbabel-2.3.2/doc/API/html/search/classes_73.html
openbabel-2.3.2/doc/API/html/search/classes_74.html
openbabel-2.3.2/doc/API/html/search/classes_76.html
openbabel-2.3.2/doc/API/html/search/classes_78.html
openbabel-2.3.2/doc/API/html/search/close.png
openbabel-2.3.2/doc/API/html/search/defines_61.html
openbabel-2.3.2/doc/API/html/search/defines_62.html
openbabel-2.3.2/doc/API/html/search/defines_63.html
openbabel-2.3.2/doc/API/html/search/defines_64.html
openbabel-2.3.2/doc/API/html/search/defines_65.html
openbabel-2.3.2/doc/API/html/search/defines_66.html
openbabel-2.3.2/doc/API/html/search/defines_68.html
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openbabel-2.3.2/doc/API/html/search/defines_6b.html
openbabel-2.3.2/doc/API/html/search/defines_6c.html
openbabel-2.3.2/doc/API/html/search/defines_6d.html
openbabel-2.3.2/doc/API/html/search/defines_6e.html
openbabel-2.3.2/doc/API/html/search/defines_6f.html
openbabel-2.3.2/doc/API/html/search/defines_70.html
openbabel-2.3.2/doc/API/html/search/defines_72.html
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openbabel-2.3.2/doc/API/html/search/defines_74.html
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openbabel-2.3.2/doc/API/html/search/defines_76.html
openbabel-2.3.2/doc/API/html/search/defines_77.html
openbabel-2.3.2/doc/API/html/search/defines_7a.html
openbabel-2.3.2/doc/API/html/search/enums_61.html
openbabel-2.3.2/doc/API/html/search/enums_62.html
openbabel-2.3.2/doc/API/html/search/enums_63.html
openbabel-2.3.2/doc/API/html/search/enums_64.html
openbabel-2.3.2/doc/API/html/search/enums_65.html
openbabel-2.3.2/doc/API/html/search/enums_66.html
openbabel-2.3.2/doc/API/html/search/enums_6c.html
openbabel-2.3.2/doc/API/html/search/enums_6d.html
openbabel-2.3.2/doc/API/html/search/enums_6e.html
openbabel-2.3.2/doc/API/html/search/enums_6f.html
openbabel-2.3.2/doc/API/html/search/enums_70.html
openbabel-2.3.2/doc/API/html/search/enums_72.html
openbabel-2.3.2/doc/API/html/search/enums_73.html
openbabel-2.3.2/doc/API/html/search/enums_74.html
openbabel-2.3.2/doc/API/html/search/enums_75.html
openbabel-2.3.2/doc/API/html/search/enums_76.html
openbabel-2.3.2/doc/API/html/search/enums_77.html
openbabel-2.3.2/doc/API/html/search/enumvalues_5f.html
openbabel-2.3.2/doc/API/html/search/enumvalues_61.html
openbabel-2.3.2/doc/API/html/search/enumvalues_62.html
openbabel-2.3.2/doc/API/html/search/enumvalues_63.html
openbabel-2.3.2/doc/API/html/search/enumvalues_64.html
openbabel-2.3.2/doc/API/html/search/enumvalues_65.html
openbabel-2.3.2/doc/API/html/search/enumvalues_66.html
openbabel-2.3.2/doc/API/html/search/enumvalues_67.html
openbabel-2.3.2/doc/API/html/search/enumvalues_68.html
openbabel-2.3.2/doc/API/html/search/enumvalues_69.html
openbabel-2.3.2/doc/API/html/search/enumvalues_6c.html
openbabel-2.3.2/doc/API/html/search/enumvalues_6d.html
openbabel-2.3.2/doc/API/html/search/enumvalues_6e.html
openbabel-2.3.2/doc/API/html/search/enumvalues_6f.html
openbabel-2.3.2/doc/API/html/search/enumvalues_70.html
openbabel-2.3.2/doc/API/html/search/enumvalues_72.html
openbabel-2.3.2/doc/API/html/search/enumvalues_73.html
openbabel-2.3.2/doc/API/html/search/enumvalues_74.html
openbabel-2.3.2/doc/API/html/search/enumvalues_75.html
openbabel-2.3.2/doc/API/html/search/enumvalues_76.html
openbabel-2.3.2/doc/API/html/search/enumvalues_77.html
openbabel-2.3.2/doc/API/html/search/enumvalues_79.html
openbabel-2.3.2/doc/API/html/search/files_61.html
openbabel-2.3.2/doc/API/html/search/files_62.html
openbabel-2.3.2/doc/API/html/search/files_63.html
openbabel-2.3.2/doc/API/html/search/files_64.html
openbabel-2.3.2/doc/API/html/search/files_65.html
openbabel-2.3.2/doc/API/html/search/files_66.html
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openbabel-2.3.2/doc/API/html/search/files_6b.html
openbabel-2.3.2/doc/API/html/search/files_6c.html
openbabel-2.3.2/doc/API/html/search/files_6d.html
openbabel-2.3.2/doc/API/html/search/files_6f.html
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openbabel-2.3.2/doc/API/html/search/functions_70.html
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openbabel-2.3.2/doc/API/html/search/functions_7a.html
openbabel-2.3.2/doc/API/html/search/functions_7e.html
openbabel-2.3.2/doc/API/html/search/mag_sel.png
openbabel-2.3.2/doc/API/html/search/namespaces_62.html
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openbabel-2.3.2/doc/API/html/search/namespaces_74.html
openbabel-2.3.2/doc/API/html/search/nomatches.html
openbabel-2.3.2/doc/API/html/search/related_6f.html
openbabel-2.3.2/doc/API/html/search/search.css
openbabel-2.3.2/doc/API/html/search/search.js
openbabel-2.3.2/doc/API/html/search/search_l.png
openbabel-2.3.2/doc/API/html/search/search_m.png
openbabel-2.3.2/doc/API/html/search/search_r.png
openbabel-2.3.2/doc/API/html/search/typedefs_61.html
openbabel-2.3.2/doc/API/html/search/typedefs_62.html
openbabel-2.3.2/doc/API/html/search/typedefs_63.html
openbabel-2.3.2/doc/API/html/search/typedefs_64.html
openbabel-2.3.2/doc/API/html/search/typedefs_65.html
openbabel-2.3.2/doc/API/html/search/typedefs_66.html
openbabel-2.3.2/doc/API/html/search/typedefs_69.html
openbabel-2.3.2/doc/API/html/search/typedefs_6b.html
openbabel-2.3.2/doc/API/html/search/typedefs_6c.html
openbabel-2.3.2/doc/API/html/search/typedefs_6d.html
openbabel-2.3.2/doc/API/html/search/typedefs_6e.html
openbabel-2.3.2/doc/API/html/search/typedefs_6f.html
openbabel-2.3.2/doc/API/html/search/typedefs_70.html
openbabel-2.3.2/doc/API/html/search/typedefs_72.html
openbabel-2.3.2/doc/API/html/search/typedefs_73.html
openbabel-2.3.2/doc/API/html/search/typedefs_74.html
openbabel-2.3.2/doc/API/html/search/typedefs_76.html
openbabel-2.3.2/doc/API/html/search/typedefs_77.html
openbabel-2.3.2/doc/API/html/search/variables_5f.html
openbabel-2.3.2/doc/API/html/search/variables_61.html
openbabel-2.3.2/doc/API/html/search/variables_62.html
openbabel-2.3.2/doc/API/html/search/variables_63.html
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openbabel-2.3.2/doc/API/html/search/variables_65.html
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openbabel-2.3.2/doc/API/html/search/variables_6c.html
openbabel-2.3.2/doc/API/html/search/variables_6d.html
openbabel-2.3.2/doc/API/html/search/variables_6e.html
openbabel-2.3.2/doc/API/html/search/variables_6f.html
openbabel-2.3.2/doc/API/html/search/variables_70.html
openbabel-2.3.2/doc/API/html/search/variables_71.html
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openbabel-2.3.2/doc/API/html/search/variables_78.html
openbabel-2.3.2/doc/API/html/search/variables_79.html
openbabel-2.3.2/doc/API/html/search/variables_7a.html
openbabel-2.3.2/data/aromatic.h
openbabel-2.3.2/data/aromatic.txt
openbabel-2.3.2/data/atomtyp.h
openbabel-2.3.2/data/atomtyp.txt
openbabel-2.3.2/data/babel_povray3.inc
openbabel-2.3.2/data/bin2hex.pl
openbabel-2.3.2/data/bondtyp.h
openbabel-2.3.2/data/bondtyp.txt
openbabel-2.3.2/data/CMakeLists.txt
openbabel-2.3.2/data/element.h
openbabel-2.3.2/data/element.txt
openbabel-2.3.2/data/fragments.txt
openbabel-2.3.2/data/gaff.dat
openbabel-2.3.2/data/gaff.prm
openbabel-2.3.2/data/genheaders.sh
openbabel-2.3.2/data/ghemical.prm
openbabel-2.3.2/data/isotope-small.txt
openbabel-2.3.2/data/isotope.h
openbabel-2.3.2/data/isotope.txt
openbabel-2.3.2/data/logp.txt
openbabel-2.3.2/data/MACCS.txt
openbabel-2.3.2/data/mm2.prm
openbabel-2.3.2/data/mmff94.ff
openbabel-2.3.2/data/mmff94s.ff
openbabel-2.3.2/data/mmffang.par
openbabel-2.3.2/data/mmffbndk.par
openbabel-2.3.2/data/mmffbond.par
openbabel-2.3.2/data/mmffchg.par
openbabel-2.3.2/data/mmffdef.par
openbabel-2.3.2/data/mmffdfsb.par
openbabel-2.3.2/data/mmffoop.par
openbabel-2.3.2/data/mmffpbci.par
openbabel-2.3.2/data/mmffprop.par
openbabel-2.3.2/data/mmffs_oop.par
openbabel-2.3.2/data/mmffs_tor.par
openbabel-2.3.2/data/mmffstbn.par
openbabel-2.3.2/data/mmfftor.par
openbabel-2.3.2/data/mmffvdw.par
openbabel-2.3.2/data/mpC.txt
openbabel-2.3.2/data/mr.txt
openbabel-2.3.2/data/patterns.txt
openbabel-2.3.2/data/phmodel.txt
openbabel-2.3.2/data/phmodeldata.h
openbabel-2.3.2/data/plugindefines.txt
openbabel-2.3.2/data/psa.txt
openbabel-2.3.2/data/qeq.txt
openbabel-2.3.2/data/resdata.h
openbabel-2.3.2/data/resdata.txt
openbabel-2.3.2/data/ringtyp.txt
openbabel-2.3.2/data/SMARTS_InteLigand.txt
openbabel-2.3.2/data/space-groups.txt
openbabel-2.3.2/data/space-groups.xsl
openbabel-2.3.2/data/splash.png
openbabel-2.3.2/data/superatom.txt
openbabel-2.3.2/data/svgformat.script
openbabel-2.3.2/data/templates.sdf
openbabel-2.3.2/data/torlib.h
openbabel-2.3.2/data/torlib.txt
openbabel-2.3.2/data/types.h
openbabel-2.3.2/data/types.txt
openbabel-2.3.2/data/UFF.prm
openbabel-2.3.2/cmake/modules/
openbabel-2.3.2/cmake/modules/FindCairo.cmake
openbabel-2.3.2/cmake/modules/FindEigen2.cmake
openbabel-2.3.2/cmake/modules/FindEigen3.cmake
openbabel-2.3.2/cmake/modules/FindInchi.cmake
openbabel-2.3.2/cmake/modules/MacroEnsureVersion.cmake
openbabel-2.3.2/cmake/modules/UsePythonTest.cmake
cd openbabel-2.3.2/
mkdir build
mkdir: cannot create directory `build': File exists
cd build/
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/openbabel-2.3.2/install ..
-- Using included inchi library.
-- Could NOT find wxWidgets (missing:  wxWidgets_FOUND) 
-- Could NOT find Eigen3 (missing:  EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
-- Could NOT find Eigen2 (missing:  EIGEN2_INCLUDE_DIR EIGEN2_VERSION_OK) (Required is at least version "2.0.0")
-- Cairo found. PNG output will be supported.
-- Attempting to build the GUI
--    wxWidgets not found => GUI will not be built
CMake Warning (dev) at test/CMakeLists.txt:171 (include):
  Syntax Warning in cmake code at

    /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14

  Argument not separated from preceding token by whitespace.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at test/CMakeLists.txt:171 (include):
  Syntax Warning in cmake code at

    /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31

  Argument not separated from preceding token by whitespace.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at test/CMakeLists.txt:171 (include):
  Syntax Warning in cmake code at

    /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25

  Argument not separated from preceding token by whitespace.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at test/CMakeLists.txt:171 (include):
  Syntax Warning in cmake code at

    /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39

  Argument not separated from preceding token by whitespace.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
  Policy CMP0053 is not set: Simplify variable reference and escape sequence
  evaluation.  Run "cmake --help-policy CMP0053" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  For input:

    '
      SET(ENV{PYTHONPATH} ${pyenv})
      SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} ${ob_libdir})
      SET(ENV{BABEL_DATADIR} ${ob_datadir})
      MESSAGE(\"${pyenv}\")
      EXECUTE_PROCESS(
      	COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  the old evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py 
      	#WORKING_DIRECTORY 
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  but the new evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testbabel.py 
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
  test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
  Policy CMP0053 is not set: Simplify variable reference and escape sequence
  evaluation.  Run "cmake --help-policy CMP0053" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  For input:

    '
      SET(ENV{PYTHONPATH} ${pyenv})
      SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} ${ob_libdir})
      SET(ENV{BABEL_DATADIR} ${ob_datadir})
      MESSAGE(\"${pyenv}\")
      EXECUTE_PROCESS(
      	COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  the old evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py 
      	#WORKING_DIRECTORY 
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  but the new evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testsym.py 
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
  test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
  Policy CMP0053 is not set: Simplify variable reference and escape sequence
  evaluation.  Run "cmake --help-policy CMP0053" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  For input:

    '
      SET(ENV{PYTHONPATH} ${pyenv})
      SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} ${ob_libdir})
      SET(ENV{BABEL_DATADIR} ${ob_datadir})
      MESSAGE(\"${pyenv}\")
      EXECUTE_PROCESS(
      	COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  the old evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py 
      	#WORKING_DIRECTORY 
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  but the new evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testfastsearch.py 
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
  test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
  Policy CMP0053 is not set: Simplify variable reference and escape sequence
  evaluation.  Run "cmake --help-policy CMP0053" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  For input:

    '
      SET(ENV{PYTHONPATH} ${pyenv})
      SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} ${ob_libdir})
      SET(ENV{BABEL_DATADIR} ${ob_datadir})
      MESSAGE(\"${pyenv}\")
      EXECUTE_PROCESS(
      	COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  the old evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py 
      	#WORKING_DIRECTORY 
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  but the new evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testunique.py 
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
  test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:37 (FILE):
  Policy CMP0053 is not set: Simplify variable reference and escape sequence
  evaluation.  Run "cmake --help-policy CMP0053" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  For input:

    '
      SET(ENV{PYTHONPATH} ${pyenv})
      SET(ENV{LD_LIBRARY_PATH} ${pyenv}:\$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} ${ob_libdir})
      SET(ENV{BABEL_DATADIR} ${ob_datadir})
      MESSAGE(\"${pyenv}\")
      EXECUTE_PROCESS(
      	COMMAND ${PYTHON_EXECUTABLE} ${loc} ${wo_semicolumn}
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  the old evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py 
      	#WORKING_DIRECTORY 
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  but the new evaluation rules produce:

    '
      SET(ENV{PYTHONPATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{LD_LIBRARY_PATH} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib:$ENV{LD_LIBRARY_PATH})
      SET(ENV{BABEL_LIBDIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib)
      SET(ENV{BABEL_DATADIR} /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/data)
      MESSAGE("/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/scripts/python:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build/lib")
      EXECUTE_PROCESS(
      	COMMAND /usr/bin/python /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/test/testkekule.py 
      	#WORKING_DIRECTORY @LIBRARY_OUTPUT_PATH@
      	RESULT_VARIABLE import_res
      	OUTPUT_VARIABLE import_output
      	ERROR_VARIABLE  import_output
      )
      
      # Pass the output back to ctest
      IF(import_output)
        MESSAGE('

  Using the old result for compatibility since the policy is not set.
Call Stack (most recent call first):
  test/CMakeLists.txt:182 (ADD_PYTHON_TEST)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
nice make -j8
-- Generating done
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/build
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make install
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Install the project...
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/babelconfig.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/pkgconfig/openbabel-2.0.pc
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2_EXPORTS-relwithdebinfo.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2Config.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/inchi/inchi_api.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chemdrawcdx.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bond.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/isomorphism.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/conformersearch.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/pointgroup.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/residue.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/xml.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/optransform.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/atomclass.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/format.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/matrix.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/builder.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/ring.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/groupcontrib.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/reaction.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/griddata.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/spectrophore.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/generic.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bitvec.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/oberror.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/mcdlutil.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chains.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/base.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/lineend.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chiral.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/descriptor.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/internalcoord.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/grid.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/molchrg.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/kinetics.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/text.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/parsmart.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rotamer.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/canon.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/shared_ptr.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/inchiformat.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obmolecformat.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rotor.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/atom.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/locale.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/graphsym.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obconversion.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/mol.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/tokenst.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/plugin.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/chargemodel.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/fingerprint.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/patty.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/dlhandler.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/rand.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/forcefield.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/alias.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/query.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obutil.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/op.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/obiter.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/phmodel.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/data.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/typer.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/bondtyper.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/transform3d.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/vector3.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/matrix3x3.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/erf.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/align.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/math/spacegroup.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/tetrahedral.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/tetraplanar.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/squareplanar.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/cistrans.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/tetranonplanar.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/stereo.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/include/openbabel-2.0/openbabel/stereo/bindings.h
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/aromatic.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/atomtyp.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/babel_povray3.inc
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/bondtyp.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/element.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/fragments.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/gaff.dat
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/gaff.prm
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/ghemical.prm
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/isotope-small.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/isotope.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/logp.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/MACCS.txt
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/mmffs_tor.par
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/mr.txt
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/plugindefines.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/psa.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/qeq.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/resdata.txt
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/SMARTS_InteLigand.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/space-groups.txt
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/torlib.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/types.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/UFF.prm
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/man/man1/obrotamer.1
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/man/man1/obrotate.1
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/man/man1/obspectrophore.1
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/share/openbabel/2.3.2/splash.png
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libopenbabel.so.4
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libopenbabel.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_descriptors.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_descriptors.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_fingerprints.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_fingerprints.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_forcefields.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_forcefields.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_ops.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_ops.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_charges.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/plugin_charges.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/smilesformat.so
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-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mdlformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mdlformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mol2format.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mol2format.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pdbformat.so
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-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/inchiformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/inchiformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/asciiformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/asciiformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/copyformat.so
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-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/MNAformat.so
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-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/molreport.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/molreport.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/nulformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/nulformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/povrayformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/povrayformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/reportformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/reportformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/svgformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/svgformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/textformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/textformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/titleformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/titleformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pngformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pngformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/acesformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/acesformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/abinitformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/abinitformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/adfformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/adfformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/castepformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/castepformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/crystal09format.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/crystal09format.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/dmolformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/dmolformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fchkformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fchkformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fhiaimsformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fhiaimsformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gamessformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gamessformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gaussformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gaussformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gausscubeformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gausscubeformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gausszmatformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gausszmatformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gulpformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gulpformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/hinformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/hinformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/jaguarformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/jaguarformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/molproformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/molproformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mopacformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mopacformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/nwchemformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/nwchemformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pwscfformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pwscfformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/qchemformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/qchemformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/turbomoleformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/turbomoleformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/vaspformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/vaspformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xsfformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xsfformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/zindoformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/zindoformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gamessukformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gamessukformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/APIInterface.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/APIInterface.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/CSRformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/CSRformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/PQSformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/PQSformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/MCDLformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/MCDLformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/alchemyformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/alchemyformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/acrformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/acrformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/amberformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/amberformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/balstformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/balstformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/bgfformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/bgfformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/boxformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/boxformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cacaoformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cacaoformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cacheformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cacheformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/carformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/carformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cccformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cccformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chem3dformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chem3dformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemdrawct.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemdrawct.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemtoolformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemtoolformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cifformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cifformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/crkformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/crkformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cssrformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cssrformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/dlpolyformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/dlpolyformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fastsearchformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fastsearchformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fastaformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fastaformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/featformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/featformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fhformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fhformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fingerprintformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fingerprintformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fpsformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/fpsformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/freefracformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/freefracformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/ghemicalformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/ghemicalformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gromos96format.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/gromos96format.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/groformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/groformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/lmpdatformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/lmpdatformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mmcifformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mmcifformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mmodformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mmodformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/moldenformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/moldenformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mpdformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mpdformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mpqcformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/mpqcformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/msiformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/msiformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/msmsformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/msmsformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/opendxformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/opendxformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/outformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/outformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pcmodelformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pcmodelformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pdbqtformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pdbqtformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/posformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/posformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pqrformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pqrformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/shelxformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/shelxformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/thermoformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/thermoformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/tinkerformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/tinkerformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/unichemformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/unichemformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/viewmolformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/viewmolformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xedformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xedformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xyzformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xyzformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/yasaraformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/yasaraformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rxnformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rxnformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemdrawcdx.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemdrawcdx.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemkinformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/chemkinformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rsmiformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/rsmiformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xtcformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xtcformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/png2format.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/png2format.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cdxmlformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cdxmlformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pubchem.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/pubchem.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xmlformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/xmlformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlreactformat.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/openbabel/2.3.2/cmlreactformat.so" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so.0.4.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so.0
-- Up-to-date: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib/libinchi.so.0.4.1" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/babel
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/babel" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obabel
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obabel" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obchiral
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obchiral" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obconformer
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obconformer" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obenergy
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obenergy" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obfit
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obfit" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgen
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgen" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obminimize
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obminimize" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprobe
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprobe" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprop
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obprop" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotamer
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotamer" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotate
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obrotate" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obspectrophore
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obspectrophore" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
 
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INSTDIR/openbabel-2.3.2/install/lib
 
export CC=cc
export CXX=CC
export FC=ftn
 
# install plplot library
cd $INSTDIR
git clone git://git.code.sf.net/p/plplot/plplot plplot.git
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgrep
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/obgrep" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
-- Installing: /u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/roundtrip
-- Set runtime path of "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/bin/roundtrip" to "/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib"
fatal: destination path 'plplot.git' already exists and is not an empty directory.
cd plplot.git/
mkdir build
mkdir: cannot create directory `build': File exists
cd build
cmake -DCMAKE_INSTALL_PREFIX=$INSTDIR/plplot.git/install ..
-- CMake version = 3.1.3
-- CMAKE_SYSTEM_NAME = Linux
-- SH_EXECUTABLE = /bin/bash
-- Checking whether system has ANSI C header files
-- ANSI C header files - found
-- SWIG_VERSION = 3.0.7
-- WARNING: Perl module XML::DOM not found
-- Looking for pkg-config - found
-- cxx_compiler_library_pathname_list = /opt/cray/atp/2.0.4/libApp/libAtpSigHandler.so;/opt/cray/atp/2.0.4/libApp/libAtpSigHCommData.a;/opt/cray/rca/1.0.0-2.0502.60530.1.63.gem/lib64/librca.so;/usr/lib64/libz.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3f.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_mpi.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3_threads.so;/opt/cray/fftw/3.3.4.10/interlagos/lib/libfftw3.so;/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib/libsci_gnu_49_mpi.so;/opt/cray/libsci/16.11.1/GNU/4.9/x86_64/lib/libsci_gnu_49.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpich_gnu_49.so;/opt/cray/mpt/7.5.0/gni/mpich-gnu/4.9/lib/libmpichcxx_gnu_49.so;/opt/gcc/4.9.3/snos/lib64/libgfortran.so;/opt/gcc/4.9.3/snos/lib64/libquadmath.so;/usr/lib64/libm.so;/usr/lib64/libpthread.so;/opt/gcc/4.9.3/snos/lib64/libstdc++.so;/usr/lib64/libm.so;/usr/lib64/libc.so
-- X11_FOUND = 1
-- X11_INCLUDE_DIR = /usr/include
-- X11_COMPILE_FLAGS = -I/usr/include
-- X11_LIBRARIES = /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so
-- NOTICE: Found: /opt/cray/craype/2.5.8/bin/ftn
-- PYTHON_VERSION = 2.6.9
-- Building Python binding with plsmem() support
-- Start determining consistent system data for Tcl and friends
-- Looking for Tcl - found
-- TCL_INCLUDE_PATH = /usr/include
-- TCL_LIBRARY = /usr/lib64/libtcl8.5.so
-- TCL_STUB_LIBRARY = /usr/lib64/libtclstub8.5.a
-- TCL_LIBRARY_PATH = /usr/lib64
-- Looking for tclsh - found
-- TCL_TCLSH = /usr/bin/tclsh
-- PLPLOT_TCL_VERSION = 8.5.5
-- WARNING: Because Tk is disabled must disable Itk as well
-- Finished determining consistent system data for Tcl and friends
-- Check for NaN awareness in C compiler
-- Check for NaN awareness in C compiler - found
-- checking for module 'pango'
--   found pango, version 1.26.2
-- checking for module 'pangoft2'
--   found pangoft2, version 1.26.2
-- Found LTDL: /usr/lib64/libltdl.so
-- LTDL_INCLUDE_DIR = /usr/include
-- LTDL_LIBRARY_DIR = /usr/lib64
-- LTDL_LIBRARIES = /usr/lib64/libltdl.so
-- checking for module 'pangocairo'
--   found pangocairo, version 1.26.2
-- WARNING: ENABLE_wxwidgets is OFF so setting all wxwidgets devices to OFF.
-- WARNING: ENABLE_ocaml is OFF so disabling Plcairo module and lablgtk2 support
-- WARNING: validate target will not be available to check for syntax issues in the PLplot DocBook documentation because onsgmls (or env) was not found.
pc_libplplot_LINK_FLAGS = /usr/lib64/libltdl.so;/usr/lib64/libm.so;-lcsirocsa;-lqsastime
-- WARNING: Perl modules XML::Parser and/or XML::DOM not available
   so cannot check that swig_documentation.i is up to date.
-- ENABLE_itcl: OFF
-- Itcl libraries: plplot;/usr/lib64/libtcl8.5.so
-- TEST_ENVIRONMENT = EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/examples SRC_EXAMPLES_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/examples OUTPUT_DIR=/u/system/bwjenkins/rmg-spp/plplot.git/build/ctest_examples_output_dir VC_CTEST_DIRECTORY=
-- Determine compile and link flags for extXdrawable_demo
-- checking for module 'gtk+-x11-2.0'
--   found gtk+-x11-2.0, version 2.18.9
-- Determine compile and link flags for ext-cairo-test
-- checking for module 'cairo'
--   found cairo, version 1.8.8

Summary of CMake build system results for PLplot

Install location variables which can be set by the user:
CMAKE_INSTALL_PREFIX:      /u/system/bwjenkins/rmg-spp/plplot.git/install
CMAKE_INSTALL_EXEC_PREFIX  /u/system/bwjenkins/rmg-spp/plplot.git/install
CMAKE_INSTALL_BINDIR 	   /u/system/bwjenkins/rmg-spp/plplot.git/install/bin
CMAKE_INSTALL_DATADIR 	   /u/system/bwjenkins/rmg-spp/plplot.git/install/share
CMAKE_INSTALL_LIBDIR 	   /u/system/bwjenkins/rmg-spp/plplot.git/install/lib
CMAKE_INSTALL_INCLUDEDIR   /u/system/bwjenkins/rmg-spp/plplot.git/install/include
CMAKE_INSTALL_INFODIR 	   /u/system/bwjenkins/rmg-spp/plplot.git/install/share/info
CMAKE_INSTALL_MANDIR 	   /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man

Derived install location variables:
DATA_DIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0
LIB_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/lib
INCLUDE_DIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/include/plplot
BIN_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/bin
TCL_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/tcl
ADA_INCLUDE_DIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/share/ada/adainclude/plplotada
ADA_LIB_DIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/lib/ada/adalib/plplotada
PYTHON_INSTDIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/lib64/python2.6/site-packages
DRV_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/lib/plplot5.12.0/drivers
DOC_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot
MAN_DIR		/u/system/bwjenkins/rmg-spp/plplot.git/install/share/man
INFO_DIR	/u/system/bwjenkins/rmg-spp/plplot.git/install/share/info

Other important CMake variables:

CMAKE_SYSTEM_NAME:	Linux
UNIX:			1
WIN32:			
APPLE:			
MSVC:				(MSVC_VERSION:	)
MINGW:			
MSYS:			
CYGWIN:			
BORLAND:		
WATCOM:		  

SWIG_FOUND:		1
PERL_FOUND:		TRUE
X11_FOUND:		1

CMAKE_BUILD_TYPE:	
CMAKE_C_COMPILER CMAKE_C_FLAGS:			/opt/cray/craype/2.5.8/bin/cc 
CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS:		/opt/cray/craype/2.5.8/bin/CC 
CMAKE_Fortran_COMPILER CMAKE_Fortran_FLAGS:	/opt/cray/craype/2.5.8/bin/ftn 
Target Fortran:	
PYTHON_EXECUTABLE:				/usr/bin/python
PYTHON_INCLUDE_PATH:				/usr/include/python2.6
PYTHON_LIBRARIES:				/usr/lib64/libpython2.6.so
NUMPY_INCLUDE_PATH:				/usr/lib64/python2.6/site-packages/numpy/core/include/numpy

ENABLE_DYNDRIVERS:	ON
DRIVERS_LIST: cairo;mem;null;ps;svg;xfig;xwin
DEVICES_LIST: memcairo;extcairo;pdfcairo;pngcairo;pscairo;epscairo;svgcairo;xcairo;mem;null;ps;svg;xfig;xwin

Library options:
BUILD_SHARED_LIBS:	ON		PL_DOUBLE:	ON

Optional libraries:
PL_HAVE_QHULL:		OFF		WITH_CSA:	ON
PL_HAVE_FREETYPE:			PL_HAVE_PTHREAD:	ON
HAVE_AGG:				HAVE_SHAPELIB:	OFF

Language Bindings:
ENABLE_ada:		OFF
ENABLE_cxx:		ON
ENABLE_d:		OFF
ENABLE_f95:		ON
ENABLE_java:		ON
ENABLE_lua:		OFF
ENABLE_ocaml:		OFF
ENABLE_octave:		OFF
ENABLE_pdl:		OFF
ENABLE_python:		ON
ENABLE_qt:		OFF
ENABLE_pyqt4:		OFF
ENABLE_pyqt5:		OFF
ENABLE_tcl:		ON
ENABLE_itcl:		OFF
ENABLE_tk:		OFF
ENABLE_itk:		OFF
ENABLE_wxwidgets:	OFF

-- Configuring done
-- Generating done
make
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/plplot.git/build
Linking C shared library libcsirocsa.so
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make install
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Install the project...
-- Install configuration: ""
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ABOUT
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/AUTHORS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/COPYING.LIB
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/ChangeLog.release
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/Copyright
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/FAQ
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/NEWS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/PROBLEMS
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.release
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.cumulated_release
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.testing
-- Installing: /u/system/bwjenkins/rmg-spp/plplot.git/install/lib/libcsirocsa.so.0.0.1
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-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_superscript_subscript.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_plplot_encodings.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_fill.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_gradient.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_type1.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_hebrew_diacritic.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_style.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_linebreak.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/test_plsmem.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x00.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x01.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x02.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x03.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x04.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x05.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x06.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x07.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x08.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x09.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x10.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x11.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x12.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x13.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x15.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x16.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x18.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x19.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x20.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x21.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x22.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x23.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x24.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x25.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x26.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x27.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x28.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x29.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x30.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/x33.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/restore.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/README.pythondemos
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/README.rendering_tests
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/README.logo
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/plplot_python_start.py
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/python/CMakeLists.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/tclIndex
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/README.tcldemos
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/plgrid.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/plot.dat
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/plot.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/r.dat
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/stats.log
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/tcldemos.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x00.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x01.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x02.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x03.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x04.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x05.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x06.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x07.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x08.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x09.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x10.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x11.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x12.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x13.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x14.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x15.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x16.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x17.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x18.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x19.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x20.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x21.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x22.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x23.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x24.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x25.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x26.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x27.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x28.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share 
# install CPU-version of RMG
cd $INSTDIR
wget http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
/plplot5.12.0/examples/tcl/x29.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x30.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x31.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x33.tcl
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x00
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x01
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x02
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x03
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x04
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x05
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x06
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x07
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x08
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x09
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x10
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x11
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x12
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x13
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x14
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x15
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x16
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x17
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x18
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x19
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x20
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x21
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x22
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x23
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x24
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x25
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x26
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x27
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x28
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x29
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x30
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x31
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/x33
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/pltcl_standard_examples.in
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/tclsh_standard_examples.in
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/CMakeLists.txt
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/plplot5.12.0/examples/tcl/mktclIndex
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/pltek.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/plserver.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/man/man1/pltcl.1
-- Up-to-date: /u/system/bwjenkins/rmg-spp/plplot.git/install/share/doc/plplot/README.pkg-config
--2018-07-18 14:47:12--  http://downloads.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
Resolving downloads.sourceforge.net... 216.105.38.13
Connecting to downloads.sourceforge.net|216.105.38.13|:80... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://phoenixnap.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz [following]
--2018-07-18 14:47:12--  https://phoenixnap.dl.sourceforge.net/project/rmgdft/Releases/2.1/Sources/rmg-release_2.1.tar.gz
Resolving phoenixnap.dl.sourceforge.net... 184.164.141.26
Connecting to phoenixnap.dl.sourceforge.net|184.164.141.26|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 42363399 (40M) [application/x-gzip]
Saving to: ‘rmg-release_2.1.tar.gz.10’

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  2400K .......... .......... .......... .......... ..........  5% 95.7M 9s
  2450K .......... .......... .......... .......... ..........  6% 86.1M 9s
  2500K .......... .......... .......... .......... ..........  6% 2.57M 9s
  2550K .......... .......... .......... .......... ..........  6% 96.3M 9s
  2600K .......... .......... .......... .......... ..........  6% 91.5M 9s
  2650K .......... .......... .......... .......... ..........  6% 63.4M 9s
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  2800K .......... .......... .......... .......... ..........  6% 69.0M 9s
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  2900K .......... .......... .......... .......... ..........  7% 73.8M 8s
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  3000K .......... .......... .......... .......... ..........  7% 87.0M 8s
  3050K .......... .......... .......... .......... ..........  7% 75.1M 8s
  3100K .......... .......... .......... .......... ..........  7% 85.4M 8s
  3150K .......... .......... .......... .......... ..........  7% 70.3M 8s
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  3250K .......... .......... .......... .......... ..........  7% 82.8M 7s
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  3400K .......... .......... .......... .......... ..........  8% 95.1M 7s
  3450K .......... .......... .......... .......... ..........  8% 87.6M 7s
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  3550K .......... .......... .......... .......... ..........  8% 85.5M 7s
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  3650K .......... .......... .......... .......... ..........  8% 90.5M 7s
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  4400K .......... .......... .......... .......... .......... 10% 87.9M 6s
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  6000K .......... .......... .......... .......... .......... 14% 87.2M 4s
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  8150K .......... .......... .......... .......... .......... 19% 96.5M 3s
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  8300K .......... .......... .......... .......... .......... 20% 96.3M 3s
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 10000K .......... .......... .......... .......... .......... 24% 55.5M 3s
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 16600K .......... .......... .......... .......... .......... 40% 59.8M 1s
 16650K .......... .......... .......... .......... .......... 40% 47.1M 1s
 16700K .......... .......... .......... .......... .......... 40% 68.4M 1s
 16750K .......... .......... .......... .......... .......... 40% 54.1M 1s
 16800K .......... .......... .......... .......... .......... 40% 64.6M 1s
 16850K .......... .......... .......... .......... .......... 40% 90.6M 1s
 16900K .......... .......... .......... .......... .......... 40% 79.8M 1s
 16950K .......... .......... .......... .......... .......... 41% 56.5M 1s
 17000K .......... .......... .......... .......... .......... 41% 45.9M 1s
 17050K .......... .......... .......... .......... .......... 41% 70.1M 1s
 17100K .......... .......... .......... .......... .......... 41% 87.3M 1s
 17150K .......... .......... .......... .......... .......... 41% 51.6M 1s
 17200K .......... .......... .......... .......... .......... 41% 90.7M 1s
 17250K .......... .......... .......... .......... .......... 41% 78.4M 1s
 17300K .......... .......... .......... .......... .......... 41% 80.2M 1s
 17350K .......... .......... .......... .......... .......... 42% 51.8M 1s
 17400K .......... .......... .......... .......... .......... 42% 56.2M 1s
 17450K .......... .......... .......... .......... .......... 42% 68.3M 1s
 17500K .......... .......... .......... .......... .......... 42% 58.1M 1s
 17550K .......... .......... .......... .......... .......... 42% 58.4M 1s
 17600K .......... .......... .......... .......... .......... 42% 81.0M 1s
 17650K .......... .......... .......... .......... .......... 42% 88.2M 1s
 17700K .......... .......... .......... .......... .......... 42% 80.6M 1s
 17750K .......... .......... .......... .......... .......... 43% 69.8M 1s
 17800K .......... .......... .......... .......... .......... 43% 81.3M 1s
 17850K .......... .......... .......... .......... .......... 43%  113M 1s
 17900K .......... .......... .......... .......... .......... 43%  121M 1s
 17950K .......... .......... .......... .......... .......... 43% 99.4M 1s
 18000K .......... .......... .......... .......... .......... 43%  114M 1s
 18050K .......... .......... .......... .......... .......... 43%  118M 1s
 18100K .......... .......... .......... .......... .......... 43% 91.9M 1s
 18150K .......... .......... .......... .......... .......... 43% 90.3M 1s
 18200K .......... .......... .......... .......... .......... 44%  117M 1s
 18250K .......... .......... .......... .......... .......... 44%  122M 1s
 18300K .......... .......... .......... .......... .......... 44%  106M 1s
 18350K .......... .......... .......... .......... .......... 44% 97.2M 1s
 18400K .......... .......... .......... .......... .......... 44%  120M 1s
 18450K .......... .......... .......... .......... .......... 44%  117M 1s
 18500K .......... .......... .......... .......... .......... 44%  118M 1s
 18550K .......... .......... .......... .......... .......... 44% 99.7M 1s
 18600K .......... .......... .......... .......... .......... 45%  117M 1s
 18650K .......... .......... .......... .......... .......... 45%  121M 1s
 18700K .......... .......... .......... .......... .......... 45%  105M 1s
 18750K .......... .......... .......... .......... .......... 45% 98.5M 1s
 18800K .......... .......... .......... .......... .......... 45% 50.0M 1s
 18850K .......... .......... .......... .......... .......... 45% 82.4M 1s
 18900K .......... .......... .......... .......... .......... 45% 90.2M 1s
 18950K .......... .......... .......... .......... .......... 45% 67.3M 1s
 19000K .......... .......... .......... .......... .......... 46% 67.7M 1s
 19050K .......... .......... .......... .......... .......... 46% 71.3M 1s
 19100K .......... .......... .......... .......... .......... 46% 92.8M 1s
 19150K .......... .......... .......... .......... .......... 46% 73.4M 1s
 19200K .......... .......... .......... .......... .......... 46% 91.8M 1s
 19250K .......... .......... .......... .......... .......... 46% 98.9M 1s
 19300K .......... .......... .......... .......... .......... 46% 92.3M 1s
 19350K .......... .......... .......... .......... .......... 46% 82.7M 1s
 19400K .......... .......... .......... .......... .......... 47% 98.6M 1s
 19450K .......... .......... .......... .......... .......... 47% 93.0M 1s
 19500K .......... .......... .......... .......... .......... 47% 89.2M 1s
 19550K .......... .......... .......... .......... .......... 47% 79.6M 1s
 19600K .......... .......... .......... .......... .......... 47% 54.4M 1s
 19650K .......... .......... .......... .......... .......... 47% 71.3M 1s
 19700K .......... .......... .......... .......... .......... 47% 76.1M 1s
 19750K .......... .......... .......... .......... .......... 47% 71.1M 1s
 19800K .......... .......... .......... .......... .......... 47% 75.9M 1s
 19850K .......... .......... .......... .......... .......... 48% 75.2M 1s
 19900K .......... .......... .......... .......... .......... 48% 63.8M 1s
 19950K .......... .......... .......... .......... .......... 48% 64.4M 1s
 20000K .......... .......... .......... .......... .......... 48% 92.0M 1s
 20050K .......... .......... .......... .......... .......... 48% 63.6M 1s
 20100K .......... .......... .......... .......... .......... 48% 83.0M 1s
 20150K .......... .......... .......... .......... .......... 48% 62.2M 1s
 20200K .......... .......... .......... .......... .......... 48% 74.0M 1s
 20250K .......... .......... .......... .......... .......... 49% 86.7M 1s
 20300K .......... .......... .......... .......... .......... 49% 77.3M 1s
 20350K .......... .......... .......... .......... .......... 49% 71.3M 1s
 20400K .......... .......... .......... .......... .......... 49% 81.1M 1s
 20450K .......... .......... .......... .......... .......... 49% 79.9M 1s
 20500K .......... .......... .......... .......... .......... 49% 85.5M 1s
 20550K .......... .......... .......... .......... .......... 49% 68.4M 1s
 20600K .......... .......... .......... .......... .......... 49% 66.4M 1s
 20650K .......... .......... .......... .......... .......... 50% 75.5M 1s
 20700K .......... .......... .......... .......... .......... 50% 77.6M 1s
 20750K .......... .......... .......... .......... .......... 50% 59.2M 1s
 20800K .......... .......... .......... .......... .......... 50% 79.3M 1s
 20850K .......... .......... .......... .......... .......... 50% 5.21M 1s
 20900K .......... .......... .......... .......... .......... 50% 58.9M 1s
 20950K .......... .......... .......... .......... .......... 50% 40.4M 1s
 21000K .......... .......... .......... .......... .......... 50% 58.0M 1s
 21050K .......... .......... .......... .......... .......... 51% 55.6M 1s
 21100K .......... .......... .......... .......... .......... 51% 54.0M 1s
 21150K .......... .......... .......... .......... .......... 51% 47.9M 1s
 21200K .......... .......... .......... .......... .......... 51% 59.5M 1s
 21250K .......... .......... .......... .......... .......... 51% 58.8M 1s
 21300K .......... .......... .......... .......... .......... 51% 70.3M 1s
 21350K .......... .......... .......... .......... .......... 51% 53.0M 1s
 21400K .......... .......... .......... .......... .......... 51% 66.5M 1s
 21450K .......... .......... .......... .......... .......... 51% 57.9M 1s
 21500K .......... .......... .......... .......... .......... 52% 64.9M 1s
 21550K .......... .......... .......... .......... .......... 52% 49.6M 1s
 21600K .......... .......... .......... .......... .......... 52% 60.3M 1s
 21650K .......... .......... .......... .......... .......... 52% 55.2M 1s
 21700K .......... .......... .......... .......... .......... 52% 61.5M 1s
 21750K .......... .......... .......... .......... .......... 52% 52.9M 1s
 21800K .......... .......... .......... .......... .......... 52% 48.4M 1s
 21850K .......... .......... .......... .......... .......... 52% 63.6M 1s
 21900K .......... .......... .......... .......... .......... 53% 58.4M 1s
 21950K .......... .......... .......... .......... .......... 53% 53.3M 1s
 22000K .......... .......... .......... .......... .......... 53% 63.8M 1s
 22050K .......... .......... .......... .......... .......... 53% 58.9M 1s
 22100K .......... .......... .......... .......... .......... 53% 73.8M 1s
 22150K .......... .......... .......... .......... .......... 53% 76.6M 1s
 22200K .......... .......... .......... .......... .......... 53% 92.4M 1s
 22250K .......... .......... .......... .......... .......... 53% 46.2M 1s
 22300K .......... .......... .......... .......... .......... 54% 92.1M 1s
 22350K .......... .......... .......... .......... .......... 54% 69.6M 1s
 22400K .......... .......... .......... .......... .......... 54% 82.2M 1s
 22450K .......... .......... .......... .......... .......... 54% 83.0M 1s
 22500K .......... .......... .......... .......... .......... 54% 86.4M 1s
 22550K .......... .......... .......... .......... .......... 54% 76.0M 1s
 22600K .......... .......... .......... .......... .......... 54% 90.4M 1s
 22650K .......... .......... .......... .......... .......... 54% 88.5M 1s
 22700K .......... .......... .......... .......... .......... 54% 99.8M 1s
 22750K .......... .......... .......... .......... .......... 55% 90.8M 1s
 22800K .......... .......... .......... .......... .......... 55%  106M 1s
 22850K .......... .......... .......... .......... .......... 55%  113M 1s
 22900K .......... .......... .......... .......... .......... 55%  112M 1s
 22950K .......... .......... .......... .......... .......... 55% 81.0M 1s
 23000K .......... .......... .......... .......... .......... 55% 88.7M 1s
 23050K .......... .......... .......... .......... .......... 55% 91.8M 1s
 23100K .......... .......... .......... .......... .......... 55%  102M 1s
 23150K .......... .......... .......... .......... .......... 56% 82.5M 1s
 23200K .......... .......... .......... .......... .......... 56% 98.6M 1s
 23250K .......... .......... .......... .......... .......... 56% 89.9M 1s
 23300K .......... .......... .......... .......... .......... 56% 95.1M 1s
 23350K .......... .......... .......... .......... .......... 56% 90.8M 1s
 23400K .......... .......... .......... .......... .......... 56%  101M 1s
 23450K .......... .......... .......... .......... .......... 56% 98.5M 1s
 23500K .......... .......... .......... .......... .......... 56%  104M 1s
 23550K .......... .......... .......... .......... .......... 57% 90.3M 1s
 23600K .......... .......... .......... .......... .......... 57%  105M 1s
 23650K .......... .......... .......... .......... .......... 57%  107M 1s
 23700K .......... .......... .......... .......... .......... 57%  105M 1s
 23750K .......... .......... .......... .......... .......... 57% 92.1M 1s
 23800K .......... .......... .......... .......... .......... 57%  111M 1s
 23850K .......... .......... .......... .......... .......... 57%  113M 1s
 23900K .......... .......... .......... .......... .......... 57% 82.1M 1s
 23950K .......... .......... .......... .......... .......... 58% 67.7M 1s
 24000K .......... .......... .......... .......... .......... 58% 84.8M 1s
 24050K .......... .......... .......... .......... .......... 58% 84.2M 1s
 24100K .......... .......... .......... .......... .......... 58% 85.3M 1s
 24150K .......... .......... .......... .......... .......... 58% 73.6M 1s
 24200K .......... .......... .......... .......... .......... 58% 82.9M 1s
 24250K .......... .......... .......... .......... .......... 58% 84.0M 1s
 24300K .......... .......... .......... .......... .......... 58% 83.4M 1s
 24350K .......... .......... .......... .......... .......... 58% 70.8M 1s
 24400K .......... .......... .......... .......... .......... 59% 85.6M 1s
 24450K .......... .......... .......... .......... .......... 59% 84.7M 1s
 24500K .......... .......... .......... .......... .......... 59% 88.3M 1s
 24550K .......... .......... .......... .......... .......... 59% 69.2M 1s
 24600K .......... .......... .......... .......... .......... 59% 82.3M 1s
 24650K .......... .......... .......... .......... .......... 59% 80.5M 1s
 24700K .......... .......... .......... .......... .......... 59% 84.5M 1s
 24750K .......... .......... .......... .......... .......... 59% 76.1M 1s
 24800K .......... .......... .......... .......... .......... 60% 93.9M 1s
 24850K .......... .......... .......... .......... .......... 60% 91.4M 1s
 24900K .......... .......... .......... .......... .......... 60% 94.4M 1s
 24950K .......... .......... .......... .......... .......... 60% 83.0M 1s
 25000K .......... .......... .......... .......... .......... 60% 87.3M 1s
 25050K .......... .......... .......... .......... .......... 60% 93.6M 1s
 25100K .......... .......... .......... .......... .......... 60% 93.1M 1s
 25150K .......... .......... .......... .......... .......... 60% 70.3M 1s
 25200K .......... .......... .......... .......... .......... 61% 84.1M 1s
 25250K .......... .......... .......... .......... .......... 61% 66.9M 1s
 25300K .......... .......... .......... .......... .......... 61% 82.7M 1s
 25350K .......... .......... .......... .......... .......... 61% 75.4M 1s
 25400K .......... .......... .......... .......... .......... 61% 82.9M 1s
 25450K .......... .......... .......... .......... .......... 61% 86.6M 1s
 25500K .......... .......... .......... .......... .......... 61% 86.8M 1s
 25550K .......... .......... .......... .......... .......... 61% 71.6M 1s
 25600K .......... .......... .......... .......... .......... 62% 96.1M 1s
 25650K .......... .......... .......... .......... .......... 62% 94.3M 1s
 25700K .......... .......... .......... .......... .......... 62% 96.5M 1s
 25750K .......... .......... .......... .......... .......... 62% 84.9M 1s
 25800K .......... .......... .......... .......... .......... 62% 93.5M 1s
 25850K .......... .......... .......... .......... .......... 62% 93.3M 1s
 25900K .......... .......... .......... .......... .......... 62% 91.2M 1s
 25950K .......... .......... .......... .......... .......... 62% 65.2M 1s
 26000K .......... .......... .......... .......... .......... 62% 82.8M 1s
 26050K .......... .......... .......... .......... .......... 63% 82.8M 1s
 26100K .......... .......... .......... .......... .......... 63% 84.4M 1s
 26150K .......... .......... .......... .......... .......... 63% 76.7M 1s
 26200K .......... .......... .......... .......... .......... 63% 83.4M 1s
 26250K .......... .......... .......... .......... .......... 63% 81.1M 1s
 26300K .......... .......... .......... .......... .......... 63% 67.1M 1s
 26350K .......... .......... .......... .......... .......... 63% 53.3M 1s
 26400K .......... .......... .......... .......... .......... 63% 66.2M 1s
 26450K .......... .......... .......... .......... .......... 64% 68.8M 1s
 26500K .......... .......... .......... .......... .......... 64% 69.1M 1s
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 26600K .......... .......... .......... .......... .......... 64% 67.9M 1s
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 26700K .......... .......... .......... .......... .......... 64% 75.1M 1s
 26750K .......... .......... .......... .......... .......... 64% 50.6M 1s
 26800K .......... .......... .......... .......... .......... 64% 69.8M 1s
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 27100K .......... .......... .......... .......... .......... 65% 52.9M 1s
 27150K .......... .......... .......... .......... .......... 65% 51.0M 1s
 27200K .......... .......... .......... .......... .......... 65% 68.3M 1s
 27250K .......... .......... .......... .......... .......... 65% 59.8M 1s
 27300K .......... .......... .......... .......... .......... 66% 61.3M 1s
 27350K .......... .......... .......... .......... .......... 66% 49.3M 1s
 27400K .......... .......... .......... .......... .......... 66% 67.1M 1s
 27450K .......... .......... .......... .......... .......... 66% 59.4M 1s
 27500K .......... .......... .......... .......... .......... 66% 65.8M 1s
 27550K .......... .......... .......... .......... .......... 66% 52.9M 1s
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 27950K .......... .......... .......... .......... .......... 67% 94.7M 1s
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 28150K .......... .......... .......... .......... .......... 68% 70.0M 1s
 28200K .......... .......... .......... .......... .......... 68% 79.6M 1s
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 28950K .......... .......... .......... .......... .......... 70% 91.8M 0s
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 29150K .......... .......... .......... .......... .......... 70% 80.4M 0s
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 29350K .......... .......... .......... .......... .......... 71% 83.8M 0s
 29400K .......... .......... .......... .......... .......... 71% 62.0M 0s
 29450K .......... .......... .......... .......... .......... 71% 81.0M 0s
 29500K .......... .......... .......... .......... .......... 71% 95.6M 0s
 29550K .......... .......... .......... .......... .......... 71% 81.5M 0s
 29600K .......... .......... .......... .......... .......... 71% 99.7M 0s
 29650K .......... .......... .......... .......... .......... 71% 94.0M 0s
 29700K .......... .......... .......... .......... .......... 71%  110M 0s
 29750K .......... .......... .......... .......... .......... 72% 73.5M 0s
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 29900K .......... .......... .......... .......... .......... 72% 98.2M 0s
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 30000K .......... .......... .......... .......... .......... 72% 94.3M 0s
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 30100K .......... .......... .......... .......... .......... 72% 67.6M 0s
 30150K .......... .......... .......... .......... .......... 72% 65.8M 0s
 30200K .......... .......... .......... .......... .......... 73% 71.0M 0s
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 30350K .......... .......... .......... .......... .......... 73% 64.3M 0s
 30400K .......... .......... .......... .......... .......... 73% 61.7M 0s
 30450K .......... .......... .......... .......... .......... 73% 77.1M 0s
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 30600K .......... .......... .......... .......... .......... 74% 78.1M 0s
 30650K .......... .......... .......... .......... .......... 74% 72.7M 0s
 30700K .......... .......... .......... .......... .......... 74% 78.1M 0s
 30750K .......... .......... .......... .......... .......... 74% 65.1M 0s
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 30900K .......... .......... .......... .......... .......... 74% 68.7M 0s
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2018-07-18 14:47:14 (30.3 MB/s) - ‘rmg-release_2.1.tar.gz.10’ saved [42363399/42363399]

tar zxvf rmg-release_2.1.tar.gz
rmg-release_2.1/
rmg-release_2.1/XC/
rmg-release_2.1/XC/erf.f90
rmg-release_2.1/XC/vdW_kernel_table
rmg-release_2.1/XC/kind.f90
rmg-release_2.1/XC/lsda_functionals.F90
rmg-release_2.1/XC/matches.f90
rmg-release_2.1/XC/vdw_correlation.cpp
rmg-release_2.1/XC/Functional.cpp
rmg-release_2.1/XC/io_global.f90
rmg-release_2.1/XC/capital.f90
rmg-release_2.1/XC/Makefile
rmg-release_2.1/XC/funct.f90
rmg-release_2.1/XC/constants.f90
rmg-release_2.1/XC/CMakeLists.txt
rmg-release_2.1/XC/expint.f90
rmg-release_2.1/XC/more_functionals.F90
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rmg-release_2.1/lib/
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rmg-release_2.1/lib/winlibs/
rmg-release_2.1/lib/winlibs/x64/
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rmg-release_2.1/lib/winlibs/x64/libfftw3f-3.lib
rmg-release_2.1/lib/winlibs/x64/ZLIB.lib
rmg-release_2.1/lib/winlibs/x64/libfftw3l-3.lib
rmg-release_2.1/lib/winlibs/x64/SPGLIBVC12.lib
rmg-release_2.1/lib/winlibs/x64/libfftw3-3.lib
rmg-release_2.1/lib/pfft-master.tar.gz
rmg-release_2.1/lib/Elemental-0.85.tgz
rmg-release_2.1/lib/libxc-2.2.2.tar.gz
rmg-release_2.1/RMG/
rmg-release_2.1/RMG/in.c60
rmg-release_2.1/RMG/Make.xt
rmg-release_2.1/RMG/Spin/
rmg-release_2.1/RMG/Spin/Makefile
rmg-release_2.1/RMG/Spin/CMakeLists.txt
rmg-release_2.1/RMG/Spin/get_rho_oppo.c
rmg-release_2.1/RMG/Spin/GetOppositeOccupancies.cpp
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/xclda.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/gcxbcp.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/gcxcblyp_spin.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/pbex.c
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rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/xcgga.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/Makefile
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/xcgga_spin.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/perdew86.c
rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/lyp.c
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rmg-release_2.1/RMG/Spin/XC_notuseLIBXC/lsd_glyp.c
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rmg-release_2.1/US_PP/
rmg-release_2.1/US_PP/LcaoGetRho.cpp
cd rmg-release_2.1
mkdir build-cpu; cd build-cpu
mkdir: cannot create directory `build-cpu': File exists
cmake -DOPENBABEL_INCLUDES=$INSTDIR/openbabel-2.3.2/install/include/openbabel-2.0/openbabel -DOPENBABEL_LIBRARIES=$INSTDIR/openbabel-2.3.2/install/lib/libopenbabel.so.4.0.2 -DPLplot_INCLUDE_DIR=$INSTDIR/plplot.git/install/include -DPLplot_cxx_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplotcxx.so -DPLplot_LIBRARY=$INSTDIR/plplot.git/install/lib/libplplot.so ..
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rmg-release_2.1/US_PP/PackFine2Rhogrid.cpp
rmg-release_2.1/US_PP/Atomic.cpp.May_08_15_45
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rmg-release_2.1/Finite_diff/AppCilrSixth.cpp
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rmg-release_2.1/Finite_diff/ApplyAOperator.cpp
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rmg-release_2.1/Headers/GlobalSums.h
rmg-release_2.1/Headers/rmg_xc.h
rmg-release_2.1/Headers/blacs.h
rmg-release_2.1/Headers/BlasWrappers.h
rmg-release_2.1/Headers/vdW.h
rmg-release_2.1/Headers/InputKey.h
rmg-release_2.1/Headers/transition.h
rmg-release_2.1/Headers/fastonebigheader.h
rmg-release_2.1/Headers/ErrorFuncs.h
rmg-release_2.1/Headers/RmgParallelFft.h
rmg-release_2.1/Headers/species.h
rmg-release_2.1/Headers/Kpoint.h
rmg-release_2.1/Headers/portability.h
rmg-release_2.1/Headers/my_scalapack.h
rmg-release_2.1/Headers/Plots.h
rmg-release_2.1/Headers/RmgGemm.h
rmg-release_2.1/Headers/init_var.h
rmg-release_2.1/Headers/CheckValue.h
rmg-release_2.1/Headers/svn-commit.tmp
rmg-release_2.1/Headers/Solvers.h
rmg-release_2.1/Headers/rmg_control.h
rmg-release_2.1/Headers/svnrev.h
rmg-release_2.1/Headers/BesselRoots.h
rmg-release_2.1/Headers/RmgShm.h
rmg-release_2.1/Headers/Subdiag.h
rmg-release_2.1/Headers/mg.h
rmg-release_2.1/Headers/pe_control.h
rmg-release_2.1/Headers/rmgtypedefs.h
rmg-release_2.1/Headers/input.h
rmg-release_2.1/Headers/pack_3d.h
rmg-release_2.1/Headers/Pw.h
rmg-release_2.1/Headers/RmgException.h
rmg-release_2.1/Headers/cnpy.h
rmg-release_2.1/Headers/BesselRoots.h.sav
rmg-release_2.1/Headers/blas.h
rmg-release_2.1/Headers/RmgInputFile.h
rmg-release_2.1/Headers/Atomic.h
rmg-release_2.1/Headers/rmgthreads.h
rmg-release_2.1/Headers/grid.h
rmg-release_2.1/Headers/lbfgs.h
rmg-release_2.1/Headers/common_prototypes.h
rmg-release_2.1/Headers/macros.h
rmg-release_2.1/Headers/make_conf.h
rmg-release_2.1/Headers/GpuAlloc.h
rmg-release_2.1/Headers/InternalPseudo.h
rmg-release_2.1/Headers/common_prototypes1.h
rmg-release_2.1/Headers/State.h
rmg-release_2.1/Headers/main.h
rmg-release_2.1/Headers/rmg_alloc.h
rmg-release_2.1/Headers/const.h
rmg-release_2.1/Headers/typedefs.h
rmg-release_2.1/Headers/remap_3d.h
rmg-release_2.1/Headers/InputOpts.h
rmg-release_2.1/Headers/Scalapack.h
rmg-release_2.1/Headers/RmgThread.h
rmg-release_2.1/Headers/MapElements.h
rmg-release_2.1/Headers/AtomicInterpolate.h
rmg-release_2.1/Headers/params.h
-- Boost version: 1.53.0
-- Found the following Boost libraries:
--   thread
--   system
--   iostreams
--   program_options
--   filesystem
CMake Warning (dev) at SubprojectIncludes/CMakeLists.txt.rmg.inc:5 (add_dependencies):
  Policy CMP0046 is not set: Error on non-existent dependency in
  add_dependencies.  Run "cmake --help-policy CMP0046" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  The dependency target "libspg" of target "rmg-cpu" does not exist.
Call Stack (most recent call first):
  CMakeLists.txt:589 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
nice make -j12 rmg-cpu
-- Generating done
-- Build files have been written to: /u/system/bwjenkins/rmg-spp/rmg-release_2.1/build-cpu
[  1%] [  1%] Built target InternalPseudo
Built target MG
[  5%] [  7%] Built target XC1
Built target Force
[  8%] Built target RMG_Spin
[ 13%] Built target XC
[ 20%] Built target RmgLib
[ 24%] Built target RMG_Subdiag
[ 29%] Built target Finite_diff
[ 34%] Built target Input
[ 40%] Built target RMG_Spin_XC
[ 49%] Built target US_PP
[ 72%] Built target Misc
[ 98%] Built target RMG_Common
Linking CXX executable rmg-cpu

rm -rf ~/scratch/rmg-spp
mkdir -p ~/scratch/rmg-spp
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/run.pbs ~/scratch/rmg-spp/run.pbs
cp /projects/bluewaters/benchmarking/SPP/rmg/test-0100-cpu/302waters.rmg_cpu ~/scratch/rmg-spp/
cd ~/scratch/rmg-spp
cat run.pbs | grep -v aprun > myrun.pbs
echo "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/rmg-spp/openbabel-2.3.2/install/lib" >> myrun.pbs
echo "time aprun -n 400 -N 4 -d 8 -cc numa_node  ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu" >> myrun.pbs

cat -n myrun.pbs

MYJOBID=`qsub myrun.pbs`
qsub myrun.pbs
[100%] Built target rmg-cpu
     1	#!/bin/bash
     2	#PBS -N z302water_cpu100
     3	#PBS -j oe
     4	#PBS -l walltime=00:59:00
     5	#PBS -l nodes=100:ppn=32:xe
     6	#PBS -q normal
     7	
     8	source /opt/modules/default/init/bash
     9	module list
    10	
    11	cd $PBS_O_WORKDIR
    12	
    13	export MPICH_MAX_THREAD_SAFETY=serialized
    14	export OMP_WAIT_POLICY=passive
    15	export MPICH_ENV_DISPLAY=1
    16	ulimit -a
    17	export MPICH_GNI_MBOX_PLACEMENT=nic
    18	export MPICH_GNI_RDMA_THRESHOLD=1024
    19	export MPICH_GNI_NUM_BUFS=512
    20	export MPICH_GNI_MAX_EAGER_MSG_SIZE=65536
    21	export OMP_NUM_THREADS=4
    22	
    23	
    24	export LD_LIBRARY_PATH=/sw/xe/boost/1.53.0/sles11.3_gnu4.8.2/lib:/opt/gcc/4.9.3/snos/lib64:/sw/xe/darshan/3.1.3/darshan-3.1.3/lib:/sw/EasyBuild/software/OpenSSL/1.0.2m/lib:/usr/local/globus-5.2.5/lib64:/usr/local/globus/lib64:/u/system/bwjenkins/rmg-spp/openbabel-2.3.2/install/lib:~/rmg-spp/openbabel-2.3.2/install/lib
    25	time aprun -n 400 -N 4 -d 8 -cc numa_node  ~/rmg-spp/rmg-release_2.1/build-cpu/rmg-cpu 302waters.rmg_cpu
INFO: Job submitted to account: jnc
echo MYJOBID=$MYJOBID
~arnoldg/ior/wait_for.sh $MYJOBID
MYJOBID=8836422.bw
=== RUNNING /u/staff/arnoldg/ior/wait_for.sh ===
Wed Jul 18 14:47:48 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 14:52:48 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 14:57:48 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:02:48 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:07:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:12:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:17:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:22:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:27:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:32:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:37:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:42:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:47:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:52:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 15:57:49 CDT 2018: waiting for 8836422.bw to finish
Wed Jul 18 16:02:49 CDT 2018: waiting for 8836422.bw to finish
qstat: Unknown Job Id Error 8836422.bw
tail *.log > ~/rmg-spp/rmg.logtail.txt

grep "real" z302water_cpu100.o*
MYREALTIME=`egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1` 
egrep "real\s" z302water_cpu100.o* | cut -dl -f2 | cut -dm -f1
echo "YVALUE= $MYREALTIME" > ~/rmg-spp/rmg.realtime
cat -n ~/rmg-spp/rmg.realtime
8836422.bw finished
real-time priority              (-r) 0
real	53m14.928s
     1	YVALUE= 	53
[SSH] exit-status: 0
[rmg-spp] $ /bin/sh -xe /tmp/jenkins2158945131353152728.sh
+ rm -rf /var/lib/jenkins/workspace/rmg-spp/rmg.logtail.txt /var/lib/jenkins/workspace/rmg-spp/rmg.realtime
+ scp 'BW_REMOTE:~/rmg-spp/*.txt' /var/lib/jenkins/workspace/rmg-spp

Access by OTP or Two Factor Certificate Authority only.
Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access.
gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access.


Blue Waters Admin Team


+ scp 'BW_REMOTE:~/rmg-spp/rmg.realtime' /var/lib/jenkins/workspace/rmg-spp

Access by OTP or Two Factor Certificate Authority only.
Use myproxy-logon -s tfca.ncsa.illinois.edu -p 7512 for gsissh access.
gsissh or ssh -o PreferredAuthentications=keyboard-interactive for otp access.


Blue Waters Admin Team


Recording plot data
Saving plot series data from: /var/lib/jenkins/workspace/rmg-spp/rmg.realtime
Finished: SUCCESS