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Started by timer
Running as SYSTEM
Building in workspace /var/lib/jenkins/jobs/IOR-jyc/workspace
[SSH] script:

# module unload darshan
# module load darshan/3.1.6
module load autoconf
module load automake
module use /u/vendor/cray/dalton/modulefiles
module unload PrgEnv-cray
module load PrgEnv/cray-18_06-cuda-9.1
~arnoldg/ior/myenv.sh
rm -rf jenkins-ior/
mkdir jenkins-ior
cd jenkins-ior
git clone https://github.com/LLNL/IOR
cd IOR
./bootstrap
./configure --host=x86_64 CC=cc
make -j 4 
file src/ior
ls -l src/ior

cp src/ior ~arnoldg/ior/src/ior
#make clean; make
cat -n ~arnoldg/ior/compare_stripe.pbs   # there is a iorscript input file for ior in the same directory
MYJOBID=`qsub ~arnoldg/ior/compare_stripeNL.pbs`
echo MYJOBID=$MYJOBID
~arnoldg/ior/wait_for.sh $MYJOBID

echo "=== JOB RAN ON ==="
cat ~/scratch/stripe8/ior-compute-nodes
if [ -f ~/scratch/stripe8/ior-compute-nodes ]
then
  :  # it's all good
else
  echo "ior-compute-nodes not found, pbs job likely hit walltime"
  exit 1
fi
rm -f ~/scratch/stripe8/ior-compute-nodes

[SSH] executing...
=== RUNNING /u/staff/arnoldg/ior/myenv.sh ===
HOST=jyc1
HOME=/u/system/bwjenkins
SCRATCH=/u/system/bwjenkins/scratch
     ls SCRATCH:
mdtest
setsm_benchmark
SPP-PPM
stripe8
sw_config
sw_workdir
test.log
tests
     my id:
uid=49294(bwjenkins) gid=16228(BW_System) groups=16228(BW_System),999(login_user),1000(ie_user),1001(hpss_user),1009(swtools),16237(jnd)
Currently Loaded Modulefiles:
  1) modules/3.2.10.5
  2) nodestat/2.2-1.0502.60539.1.31.gem
  3) sdb/1.1-1.0502.63652.4.27.gem
  4) alps/5.2.4-2.0502.9774.31.12.gem
  5) lustre-cray_gem_s/2.5_3.0.101_0.46.1_1.0502.8871.45.1-1.0502.21728.75.4
  6) udreg/2.3.2-1.0502.10518.2.17.gem
  7) ugni/6.0-1.0502.10863.8.28.gem
  8) gni-headers/4.0-1.0502.10859.9.27.gem
  9) dmapp/7.0.1-1.0502.11080.8.74.gem
 10) xpmem/0.1-2.0502.64982.7.27.gem
 11) hss-llm/7.2.0
 12) Base-opts/1.0.2-1.0502.60680.2.4.gem
 13) craype-network-gemini
 14) craype-interlagos
 15) craype/2.5.15
 16) moab/9.1.2.h6-sles11
 17) torque/6.1.2
 18) openssh/7.5p1
 19) xalt/0.7.6.local
 20) scripts
 21) OpenSSL/1.0.2m
 22) cURL/7.59.0
 23) git/2.17.0
 24) wget/1.19.4
 25) user-paths
 26) gnuplot/5.0.5
 27) darshan/3.1.3-longusername
 28) autoconf/2.69
 29) automake/1.14
 30) cce/8.7.1
 31) cray-mpich/7.7.1
 32) cray-libsci/18.04.1
 33) pmi/5.0.14
 34) rca/1.0.0-2.0502.60530.1.63.gem
 35) atp/2.1.2
 36) PrgEnv/cray-18_06-cuda-9.1
Cloning into 'IOR'...
error: RPC failed; HTTP 504 curl 22 The requested URL returned error: 504 Gateway Timeout
fatal: The remote end hung up unexpectedly
bash: line 13: cd: IOR: No such file or directory
bash: line 14: ./bootstrap: No such file or directory
bash: line 15: ./configure: No such file or directory
make: *** No targets specified and no makefile found.  Stop.
ls: cannot access src/ior: No such file or directory
cp: cannot stat `src/ior': No such file or directory
INFO: Job submitted to account: jnc
src/ior: ERROR: cannot open `src/ior' (No such file or directory)
     1	#!/bin/bash 
     2	#PBS -lnodes=16:ppn=7:xe,walltime=00:10:00
     3	#PBS -NIORtest
     4	
     5	cd $HOME/scratch
     6	
     7	NP=112
     8	
     9	cd $HOME/scratch
    10	mkdir -p stripe8
    11	lfs setstripe -c 8 stripe8
    12	cd stripe8
    13	lfs getstripe .
    14	time aprun -n $NP $HOME/ior/operf.sh "$HOME/ior/src/ior -f $HOME/ior/iorscript" | tee ior.txt
    15	MYWRITENUMBER=`grep 'Max Write' ior.txt | cut -d '(' -f2 | cut -d' ' -f1`
    16	MYREADNUMBER=`grep 'Max Read' ior.txt | cut -d '(' -f2 | cut -d' ' -f1`
    17	
    18	echo "YVALUE=$MYWRITENUMBER
    19	" > myiornumber.dat
    20	
    21	echo "YVALUE=$MYREADNUMBER
    22	" > myiorREADnumber.dat
    23	
    24	aprun -n 16 -N 1 hostname > ior-compute-nodes
    25	
MYJOBID=597007.jyc
=== RUNNING /u/staff/arnoldg/ior/wait_for.sh ===
Sat Nov 27 16:18:12 CST 2021: waiting for 597007.jyc to finish
Sat Nov 27 16:23:12 CST 2021: waiting for 597007.jyc to finish
Sat Nov 27 16:28:12 CST 2021: waiting for 597007.jyc to finish
qstat: Unknown Job Id Error 597007.nid00030
597007.jyc finished
=== JOB RAN ON ===
nid00061
nid00060
nid00054
nid00051
nid00050
nid00056
nid00062
nid00053
nid00048
nid00063
nid00055
nid00052
nid00059
nid00057
nid00058
nid00049
Application 1104507 resources: utime ~0s, stime ~19s, Rss ~22504, inblocks ~304, outblocks ~448

[SSH] completed
[SSH] exit-status: 0

[workspace] $ /bin/sh -xe /tmp/jenkins2020119678358552024.sh
+ scp JYC_REMOTE:scratch/stripe8/ior.txt /var/lib/jenkins/jobs/IOR-jyc/workspace
+ scp JYC_REMOTE:scratch/stripe8/myiornumber.dat /var/lib/jenkins/jobs/IOR-jyc/workspace
+ scp JYC_REMOTE:scratch/stripe8/myiorREADnumber.dat /var/lib/jenkins/jobs/IOR-jyc/workspace
Recording plot data
Saving plot series data from: /var/lib/jenkins/jobs/IOR-jyc/workspace/myiornumber.dat
Saving plot series data from: /var/lib/jenkins/jobs/IOR-jyc/workspace/myiorREADnumber.dat
Finished: SUCCESS