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Started by user jkwack2 [EnvInject] - Loading node environment variables. Building on master in workspace /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs executing script: # Moving to the building folder cd SPP-PPM/PPM-1280-132XEs ls -al # Updating modules module unload darshan module load craype-hugepages2M module list # Building the executable rm -rf iq.h *.o PPM2F-1280 cc -c cio.c ./compile-JK-noPapi 1280 ls -al # Submitting the job script MYJOBID=`qsub run-JK` echo MYJOBID=$MYJOBID # Waiting for the job completion cat -n wait_for.sh ./wait_for.sh $MYJOBID total 25204 drwxr-xr-x 2 bwjenkins BW_System 4096 Mar 29 10:14 . drwxr-xr-x 4 bwjenkins BW_System 4096 Mar 29 09:46 .. -rw-r--r-- 1 bwjenkins BW_System 1255 Oct 12 15:07 cio.c -rw-r--r-- 1 bwjenkins BW_System 4088 Mar 29 10:13 cio.o -rwxr--r-- 1 bwjenkins BW_System 459 Mar 29 10:12 compile-JK-noPapi lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 15:08 DATA1280.5818829.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5818829.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 16:23 DATA1280.5819321.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819321.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 17:11 DATA1280.5819500.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819500.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 1 12:42 DATA1280.5821932.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5821932.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 22 08:31 DATA1280.5927252.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5927252.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Mar 27 17:36 DATA1280.6407342.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.6407342.bw -rw-r--r-- 1 bwjenkins BW_System 2775 Nov 30 16:05 FLOPS-PPM-JK-v01.py -rwxr--r-- 1 bwjenkins BW_System 538 Mar 29 10:09 generate-MPICH_RANK_ORDER -rw------- 1 bwjenkins BW_System 13 Mar 27 17:47 GFLOPS_SEC_NODE.dat -rw-r--r-- 1 bwjenkins BW_System 2326 Oct 12 15:07 Instructions-JK.txt -rw-r--r-- 1 bwjenkins BW_System 814 Oct 12 15:07 iq1280.h lrwxrwxrwx 1 bwjenkins BW_System 8 Mar 29 10:13 iq.h -> iq1280.h -rwxr-xr-x 1 bwjenkins BW_System 11186131 Mar 29 10:14 PPM2F-1280 -rw-r--r-- 1 bwjenkins BW_System 2280059 Oct 12 15:07 PPM2F-tp3-5-1-12-ICF-short-loops.F -rw-r--r-- 1 bwjenkins BW_System 4475832 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.lst -rw-r--r-- 1 bwjenkins BW_System 882304 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.o -rw-r--r-- 1 bwjenkins BW_System 6375657 Mar 29 10:14 PPM2F-tp3-5-1-12-ICF-short-loops.s -rw------- 1 bwjenkins BW_System 6413 Nov 30 15:16 PPM4Fperf.ppm.5818829.bw -rw------- 1 bwjenkins BW_System 6413 Nov 30 16:31 PPM4Fperf.ppm.5819321.bw -rw------- 1 bwjenkins BW_System 6413 Nov 30 17:19 PPM4Fperf.ppm.5819500.bw -rw------- 1 bwjenkins BW_System 6413 Dec 1 12:50 PPM4Fperf.ppm.5821932.bw -rw------- 1 bwjenkins BW_System 6413 Dec 22 08:39 PPM4Fperf.ppm.5927252.bw -rw------- 1 bwjenkins BW_System 6413 Mar 27 17:44 PPM4Fperf.ppm.6407342.bw -rw------- 1 bwjenkins BW_System 1971 Nov 30 15:20 PPM-xe-1280.o5818829 -rw------- 1 bwjenkins BW_System 1971 Nov 30 16:35 PPM-xe-1280.o5819321 -rw------- 1 bwjenkins BW_System 1649 Nov 30 17:23 PPM-xe-1280.o5819500 -rw------- 1 bwjenkins BW_System 1649 Dec 1 12:54 PPM-xe-1280.o5821932 -rw------- 1 bwjenkins BW_System 1649 Dec 22 08:43 PPM-xe-1280.o5927252 -rw------- 1 bwjenkins BW_System 1649 Mar 27 17:47 PPM-xe-1280.o6407342 -rw-r--r-- 1 bwjenkins BW_System 837 Mar 29 10:12 run-JK -rw-r--r-- 1 bwjenkins BW_System 101 Oct 12 15:08 source_me_JK -rw------- 1 bwjenkins BW_System 73331 Nov 30 15:20 stderrout.5818829.bw -rw------- 1 bwjenkins BW_System 73896 Nov 30 16:35 stderrout.5819321.bw -rw------- 1 bwjenkins BW_System 73644 Nov 30 17:22 stderrout.5819500.bw -rw------- 1 bwjenkins BW_System 72940 Dec 1 12:54 stderrout.5821932.bw -rw------- 1 bwjenkins BW_System 72882 Dec 22 08:43 stderrout.5927252.bw -rw------- 1 bwjenkins BW_System 71755 Mar 27 17:47 stderrout.6407342.bw -rw------- 1 bwjenkins BW_System 12 Mar 27 17:47 TFLOPS_SEC-AGG.dat -rwxr--r-- 1 bwjenkins BW_System 223 Oct 18 16:32 wait_for.sh Currently Loaded Modulefiles: 1) modules/3.2.10.4 2) eswrap/1.3.3-1.020200.1278.0 3) cce/8.4.6 4) craype-network-gemini 5) craype/2.5.8 6) cray-libsci/16.11.1 7) udreg/2.3.2-1.0502.10518.2.17.gem 8) ugni/6.0-1.0502.10863.8.28.gem 9) pmi/5.0.10-1.0000.11050.179.3.gem 10) dmapp/7.0.1-1.0502.11080.8.74.gem 11) gni-headers/4.0-1.0502.10859.7.8.gem 12) xpmem/0.1-2.0502.64982.5.3.gem 13) dvs/2.5_0.9.0-1.0502.2188.1.113.gem 14) alps/5.2.4-2.0502.9774.31.12.gem 15) rca/1.0.0-2.0502.60530.1.63.gem 16) atp/2.0.4 17) PrgEnv-cray/5.2.82 18) cray-mpich/7.5.0 19) craype-interlagos 20) torque/6.0.3 21) moab/9.0.2.TAS2-1477409647_6706986-sles11 22) java/jdk1.8.0_51 23) globus/5.2.5 24) gsissh/6.2p2 25) scripts 26) user-paths 27) xalt/0.7.6 28) craype-hugepages2M if (ifthunder .gt. 0) fv1 = .01 ftn-7212 crayftn: WARNING SETCONSTS, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 2913 Variable "ifthunder" is used before it is defined. call setconsts (g,TransitionThickness,DisplaceAmpl,power, ftn-7212 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4008 Variable "ifthunder" is used before it is defined. call setaaa (g,TransitionThickness,DisplaceAmpl, ^ ftn-3141 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4119, Column = 12 Static variable "yavglob" in "master" overlaps a callee static variable "aaa" in "setaaa". write (6,*) (perfdata(ioff+i),i=1,53),' mysrc =',mysrc ftn-7212 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 4350 Variable "mysrc" is used before it is defined. return ^ ftn-362 crayftn: WARNING MASTER, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 5333, Column = 7 This statement can not be reached. write (6,*) 'jj =',jj,' jbrick =',jbrick ftn-7212 crayftn: WARNING BUILDPROF, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 6841 Variable "jbrick" is used before it is defined. call setconsts (g,TransitionThickness,DisplaceAmpl,power, ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 9492 Variable "ifthunder" is used before it is defined. call setaaa (g,TransitionThickness,DisplaceAmpl, ^ ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 10254, Column = 12 Static variable "globthist" in "workerbee" overlaps a callee static variable "aaa" in "setaaa". deet = abs(time- (scalabilityt2 + scalabilitytimed/8) ) ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 12889 Variable "scalabilityt2" is used before it is defined. deet = abs(time- (scalabilityt3 + scalabilitytimed/8)) ftn-7212 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 12899 Variable "scalabilityt3" is used before it is defined. call updatesubbrickx(ibrick,jbrick,kbrick,mbrick, ^ ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 14001, Column = 12 Static variable "aaagrid" in "workerbee" overlaps a callee static variable "zzf" in "updatesubbrickx". call updatesubbrickz(ibrick,jbrick,kbrick,mbrick, ^ ftn-3141 crayftn: WARNING WORKERBEE, File = PPM2F-tp3-5-1-12-ICF-short-loops.F, Line = 14251, Column = 12 Static variable "aaagrid" in "workerbee" overlaps a callee static variable "zzf" in "updatesubbrickz". total 23445 drwxr-xr-x 2 bwjenkins BW_System 4096 Mar 29 10:17 . drwxr-xr-x 4 bwjenkins BW_System 4096 Mar 29 09:46 .. -rw-r--r-- 1 bwjenkins BW_System 1255 Oct 12 15:07 cio.c -rw-r--r-- 1 bwjenkins BW_System 4088 Mar 29 10:16 cio.o -rwxr--r-- 1 bwjenkins BW_System 459 Mar 29 10:12 compile-JK-noPapi lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 15:08 DATA1280.5818829.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5818829.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 16:23 DATA1280.5819321.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819321.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Nov 30 17:11 DATA1280.5819500.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5819500.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 1 12:42 DATA1280.5821932.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5821932.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Dec 22 08:31 DATA1280.5927252.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.5927252.bw lrwxrwxrwx 1 bwjenkins BW_System 53 Mar 27 17:36 DATA1280.6407342.bw -> /scratch/system/bwjenkins/SPP-PPM/DATA1280.6407342.bw -rw-r--r-- 1 bwjenkins BW_System 2775 Nov 30 16:05 FLOPS-PPM-JK-v01.py -rwxr--r-- 1 bwjenkins BW_System 538 Mar 29 10:09 generate-MPICH_RANK_ORDER -rw------- 1 bwjenkins BW_System 13 Mar 27 17:47 GFLOPS_SEC_NODE.dat -rw-r--r-- 1 bwjenkins BW_System 2326 Oct 12 15:07 Instructions-JK.txt -rw-r--r-- 1 bwjenkins BW_System 814 Oct 12 15:07 iq1280.h lrwxrwxrwx 1 bwjenkins BW_System 8 Mar 29 10:16 iq.h -> iq1280.h -rwxr-xr-x 1 bwjenkins BW_System 11186131 Mar 29 10:17 PPM2F-1280 -rw-r--r-- 1 bwjenkins BW_System 2280059 Oct 12 15:07 PPM2F-tp3-5-1-12-ICF-short-loops.F -rw-r--r-- 1 bwjenkins BW_System 4475832 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.lst -rw-r--r-- 1 bwjenkins BW_System 882304 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.o -rw-r--r-- 1 bwjenkins BW_System 6375661 Mar 29 10:17 PPM2F-tp3-5-1-12-ICF-short-loops.s -rw------- 1 bwjenkins BW_System 6413 Nov 30 15:16 PPM4Fperf.ppm.5818829.bw -rw------- 1 bwjenkins BW_System 6413 Nov 30 16:31 PPM4Fperf.ppm.5819321.bw -rw------- 1 bwjenkins BW_System 6413 Nov 30 17:19 PPM4Fperf.ppm.5819500.bw -rw------- 1 bwjenkins BW_System 6413 Dec 1 12:50 PPM4Fperf.ppm.5821932.bw -rw------- 1 bwjenkins BW_System 6413 Dec 22 08:39 PPM4Fperf.ppm.5927252.bw -rw------- 1 bwjenkins BW_System 6413 Mar 27 17:44 PPM4Fperf.ppm.6407342.bw -rw------- 1 bwjenkins BW_System 1971 Nov 30 15:20 PPM-xe-1280.o5818829 -rw------- 1 bwjenkins BW_System 1971 Nov 30 16:35 PPM-xe-1280.o5819321 -rw------- 1 bwjenkins BW_System 1649 Nov 30 17:23 PPM-xe-1280.o5819500 -rw------- 1 bwjenkins BW_System 1649 Dec 1 12:54 PPM-xe-1280.o5821932 -rw------- 1 bwjenkins BW_System 1649 Dec 22 08:43 PPM-xe-1280.o5927252 -rw------- 1 bwjenkins BW_System 1649 Mar 27 17:47 PPM-xe-1280.o6407342 -rw-r--r-- 1 bwjenkins BW_System 837 Mar 29 10:12 run-JK -rw-r--r-- 1 bwjenkins BW_System 101 Oct 12 15:08 source_me_JK -rw------- 1 bwjenkins BW_System 73331 Nov 30 15:20 stderrout.5818829.bw -rw------- 1 bwjenkins BW_System 73896 Nov 30 16:35 stderrout.5819321.bw -rw------- 1 bwjenkins BW_System 73644 Nov 30 17:22 stderrout.5819500.bw -rw------- 1 bwjenkins BW_System 72940 Dec 1 12:54 stderrout.5821932.bw -rw------- 1 bwjenkins BW_System 72882 Dec 22 08:43 stderrout.5927252.bw -rw------- 1 bwjenkins BW_System 71755 Mar 27 17:47 stderrout.6407342.bw -rw------- 1 bwjenkins BW_System 12 Mar 27 17:47 TFLOPS_SEC-AGG.dat -rwxr--r-- 1 bwjenkins BW_System 223 Oct 18 16:32 wait_for.sh Job submitted to account: jnc MYJOBID=6413639.bw 1 #!/bin/bash 2 echo "=== RUNNING $0 ===" 3 4 while true 5 do 6 7 MYQSTAT=`qstat $1` 8 if test "$MYQSTAT" = "" 9 then 10 echo $1 finished 11 exit 12 else 13 DATE=`date` 14 echo "$DATE: waiting for $1 to finish" 15 16 fi 17 18 sleep 5m 19 20 done 21 22 === RUNNING ./wait_for.sh === Wed Mar 29 10:17:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:22:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:27:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:32:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:37:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:42:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:47:11 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:52:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 10:57:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:02:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:07:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:12:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:17:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:22:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:27:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:32:12 CDT 2017: waiting for 6413639.bw to finish Wed Mar 29 11:37:12 CDT 2017: waiting for 6413639.bw to finish Build was aborted Aborted by jkwack2 Recording plot data Saving plot series data from: /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs/GFLOPS_SEC_NODE.dat Saving plot series data from: /var/lib/jenkins/workspace/SPP-PPM-1280-132XEs/TFLOPS_SEC-AGG.dat Finished: ABORTED