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Started by user arnoldg
Running as SYSTEM
Building in workspace /var/lib/jenkins/jobs/mpiGraph/workspace
[SSH] script:
PATH="/sw/tools/bin:/sw/tools/bin:$PATH"
NODELIST=""""
ACCOUNT="bbmb-hydro"
PARTITION="sandybridge"
NODES="16"


# tar xvf /var/tmp/mpiGraph.tar  # galen's copy of the benchmark
cd mpiGraph
export PATH=~/mpiGraph:$PATH


# if the NODELIST parameter was filled in, proceed with a targeted test 
if [[ ! -z ${NODELIST} ]]
then

   srun --mem=16g --nodes=${NODES} --ntasks-per-node=1 --time=00:10:00 --job-name=mpiGraph \
      --partition=${PARTITION} --nodelist=${NODELIST} \
      --account=${ACCOUNT} ${GPUS} \
      mpiGraph 1048576 1000 10 > mpiGraph.out
   
   if [ "${NODES}" == "16" ]
   then
      bash clip-plot.sh 16 
   fi

   exit
fi

# otherwise, if NODELIST is "", run the default test on 1st avail nodes

srun --nodes=${NODES}  \
  --mem=16g --ntasks-per-node=1 --time=00:10:00 --job-name=mpiGraph \
  --account=${ACCOUNT} \
  --partition=${PARTITION}  \
 mpiGraph 1048576 1000 10 > mpiGraph.out

 if [ "${NODES}" == "16" ]
 then
      bash clip-plot.sh 16 
 fi

[SSH] executing...
NODECOUNT=$1
+ NODECOUNT=16

# clip out the Send table and plot it
egrep --after-context=$NODECOUNT "^Send\s+hy" mpiGraph.out \
   | sed -e s/.to//g > send.txt 
+ egrep --after-context=16 '^Send\s+hy' mpiGraph.out
+ sed -e s/.to//g
python3 send.py
+ python3 send.py
            hydro15:0  hydro16:1  hydro17:2  ...  hydro29:13  hydro30:14  hydro31:15
Send                                         ...                                    
hydro15:0       0.000   8445.598   8542.273  ...    3996.850    5967.628    8563.961
hydro16:1    8588.018      0.000   8340.577  ...    3004.817    5930.123    5969.165
hydro17:2    8458.453   8605.242      0.000  ...    2953.077    3004.901    3994.577
hydro18:3    6566.959   7173.455   7245.029  ...    2942.261    2404.457    3003.288
hydro19:4    8411.161   8464.080   8563.994  ...    1983.856    2003.694    2994.887
hydro20:5    8315.311   8404.943   8375.025  ...    1976.718    1718.974    2985.979
hydro22:6    8225.513   8300.488   8407.679  ...    1979.790    1717.635    1987.664
hydro23:7    8293.147   8205.379   8364.407  ...    2946.739    1718.592    1976.614
hydro24:8    8537.363   8200.005   8223.714  ...    2953.306    2002.485    1971.815
hydro25:9    1722.770   1721.196   1722.455  ...    8370.497    8310.841    8287.548
hydro26:10   2005.335   1720.496   1718.646  ...    8389.156    8413.308    8270.272
hydro27:11   2405.345   2004.538   1719.585  ...    7161.000    7398.799    7450.837
hydro28:12   3002.774   2410.643   2006.536  ...    8346.327    8436.095    8312.796
hydro29:13   4006.101   3012.836   2411.817  ...       0.000    8293.291    8511.281
hydro30:14   5958.831   4003.027   3003.832  ...    8610.551       0.000    8343.998
hydro31:15   8297.819   5965.736   3992.823  ...    8537.267    8590.586       0.000

[16 rows x 16 columns]

# clip out the Recv table and plot it
egrep --after-context=$NODECOUNT "^Recv\s+hy" mpiGraph.out \
   | sed -e s/.from//g > recv.txt 
+ egrep --after-context=16 '^Recv\s+hy' mpiGraph.out
+ sed -e s/.from//g
python3 recv.py
+ python3 recv.py
            hydro15:0  hydro16:1  hydro17:2  ...  hydro29:13  hydro30:14  hydro31:15
Recv                                         ...                                    
hydro15:0       0.000   8590.268   8539.212  ...    4013.985    5965.691    8303.527
hydro16:1    8463.819      0.000   8615.164  ...    3016.418    4012.170    5979.208
hydro17:2    8568.031   8437.499      0.000  ...    2415.398    3011.338    4000.431
hydro18:3    7454.352   8299.364   7155.602  ...    2007.950    2408.980    3005.002
hydro19:4    8586.848   8516.505   8516.488  ...    1724.079    2011.002    2413.944
hydro20:5    8536.511   8565.634   8518.056  ...    1722.011    1727.176    2019.250
hydro22:6    8562.051   8532.243   8588.289  ...    1725.314    1724.054    1724.004
hydro23:7    8548.510   8545.188   8519.229  ...    2012.767    1725.772    1724.117
hydro24:8    8549.198   8560.656   8554.213  ...    2413.174    2011.991    1725.496
hydro25:9    2004.365   2005.260   2012.629  ...    8613.818    8599.036    8572.635
hydro26:10   2009.410   1726.925   1719.924  ...    8580.326    8628.208    8572.554
hydro27:11   2408.632   2005.826   1719.207  ...    8343.862    8096.559    8150.015
hydro28:12   3017.299   2410.671   2009.843  ...    8581.544    8563.974    8559.905
hydro29:13   4006.374   3009.333   3000.386  ...       0.000    8618.282    8613.776
hydro30:14   5986.530   5978.050   3010.442  ...    8309.125       0.000    8592.298
hydro31:15   8591.207   5981.438   4002.751  ...    8618.887    8416.753       0.000

[16 rows x 16 columns]

[SSH] completed
[SSH] exit-status: 0

[workspace] $ /bin/sh -xe /tmp/jenkins2975711940737975292.sh
+ scp 'HYDRO_REMOTE:mpiGraph/*.txt' /var/lib/jenkins/jobs/mpiGraph/workspace
+ scp 'HYDRO_REMOTE:mpiGraph/*.png' /var/lib/jenkins/jobs/mpiGraph/workspace
Finished: SUCCESS